RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ASIPP42127 132 aa8.63□□□□□ -1.03
USP46-204ENST00000503060 SLURP1P55000 103 aa8.63□□□□□ -1.03
USP46-204ENST00000503060 NDUFV3P56181 108 aaKnown RBP8.63□□□□□ -1.03
USP46-204ENST00000503060 SNRPD3P62318 126 aaKnown RBP8.63□□□□□ -1.03
USP46-204ENST00000503060 KRTAP1-1Q07627 177 aa8.63□□□□□ -1.03
USP46-204ENST00000503060 DEFB136Q30KP8 78 aa8.63□□□□□ -1.03
USP46-204ENST00000503060 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
USP46-204ENST00000503060 MXRA5Q9NR99 2828 aa8.63□□□□□ -1.03
USP46-204ENST00000503060 TRAV9-2A0A087WT02 112 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 DNAJC9-AS1A6NH13 148 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 S100A4P26447 101 aaKnown RBP8.62□□□□□ -1.03
USP46-204ENST00000503060 Q6ZSV7 163 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 Q8N1Y9 231 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 C11orf45Q8TAV5 145 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 KIR2DL4Q99706 377 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 ZNF747Q9BV97 191 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 LINC01619G3V211 115 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 C4orf3Q8WVX3 66 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 ODF3Q96PU9 254 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 JPT2Q9H910 190 aa8.62□□□□□ -1.03
USP46-204ENST00000503060 A0A0J9YX75 114 aa8.61□□□□□ -1.03
USP46-204ENST00000503060 CD5LO43866 347 aa8.61□□□□□ -1.03
USP46-204ENST00000503060 SCRT2Q9NQ03 307 aa8.61□□□□□ -1.03
USP46-204ENST00000503060 GNRH2O43555 120 aa8.61□□□□□ -1.03
USP46-204ENST00000503060 TSPOP30536 169 aa8.61□□□□□ -1.03
USP46-204ENST00000503060 Q5XG85 94 aa8.61□□□□□ -1.03
USP46-204ENST00000503060 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
USP46-204ENST00000503060 C9orf85Q96MD7 179 aa8.61□□□□□ -1.03
USP46-204ENST00000503060 HBDP02042 147 aa8.6□□□□□ -1.03
USP46-204ENST00000503060 C1orf158Q8N1D5 194 aa8.6□□□□□ -1.03
USP46-204ENST00000503060 PHLDA3Q9Y5J5 127 aa8.6□□□□□ -1.03
USP46-204ENST00000503060 NBPF19A0A087WUL8 3843 aa8.6□□□□□ -1.03
USP46-204ENST00000503060 LINC01546A6NGU7 62 aa8.6□□□□□ -1.03
USP46-204ENST00000503060 M0R381 172 aa8.6□□□□□ -1.03
USP46-204ENST00000503060 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
USP46-204ENST00000503060 LINC01587Q99440 93 aa8.6□□□□□ -1.03
USP46-204ENST00000503060 NXT2Q9NPJ8 142 aaKnown RBP8.6□□□□□ -1.03
USP46-204ENST00000503060 ESM1Q9NQ30 184 aa8.6□□□□□ -1.03
USP46-204ENST00000503060 IGLL1P15814 213 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 FXYD7P58549 80 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 PMAIP1Q13794 54 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 Q6ZUT4 128 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 NRACQ8N912 160 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 MDFICQ9P1T7 246 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 X6R8D5 127 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 TLN2Q9Y4G6 2542 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 CCDC168Q8NDH2 2452 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 TRAV12-3A0A0B4J271 114 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 DUSP14O95147 198 aaKnown RBP8.59□□□□□ -1.03
USP46-204ENST00000503060 KLHL30-AS1Q8NEE0 82 aa8.59□□□□□ -1.03
USP46-204ENST00000503060 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
USP46-204ENST00000503060 TRAV26-2A0A0B4J265 109 aa8.58□□□□□ -1.04
USP46-204ENST00000503060 IGKV3-20P01619 116 aa8.58□□□□□ -1.04
USP46-204ENST00000503060 Q8N8P6 123 aa8.58□□□□□ -1.04
USP46-204ENST00000503060 A6NDN8 102 aa8.58□□□□□ -1.04
USP46-204ENST00000503060 CCL24O00175 119 aa8.58□□□□□ -1.04
USP46-204ENST00000503060 DPH3P1Q9H4G8 78 aa8.58□□□□□ -1.04
USP46-204ENST00000503060 PDZD2O15018 2839 aa8.57□□□□□ -1.04
USP46-204ENST00000503060 FLNAP21333 2647 aaKnown RBP8.57□□□□□ -1.04
USP46-204ENST00000503060 IGLV2-18A0A075B6J9 118 aa8.57□□□□□ -1.04
USP46-204ENST00000503060 NXPH4O95158 308 aa8.57□□□□□ -1.04
USP46-204ENST00000503060 FCER1GP30273 86 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 C14orf178Q8N769 122 aaPredicted RBP8.56□□□□□ -1.04
USP46-204ENST00000503060 DLX4Q92988 240 aaPredicted RBP8.56□□□□□ -1.04
USP46-204ENST00000503060 PMCHL2Q9BQD1 86 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 SONP18583 2426 aaKnown RBP8.56□□□□□ -1.04
USP46-204ENST00000503060 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
USP46-204ENST00000503060 TRAV12-2A0A075B6T6 113 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 TRAV2A0A0B4J234 112 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 MT-ATP8P03928 68 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 IFITM1P13164 125 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 CARD19Q96LW7 228 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 AP1S3Q96PC3 154 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 Q9H8V8 135 aa8.56□□□□□ -1.04
USP46-204ENST00000503060 CD7P09564 240 aa8.55□□□□□ -1.04
USP46-204ENST00000503060 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
USP46-204ENST00000503060 AMTNQ6UX39 209 aa8.55□□□□□ -1.04
USP46-204ENST00000503060 IFI27L1Q96BM0 104 aa8.55□□□□□ -1.04
USP46-204ENST00000503060 ST20Q9HBF5 79 aa8.55□□□□□ -1.04
USP46-204ENST00000503060 Q6Q795 121 aa8.55□□□□□ -1.04
USP46-204ENST00000503060 TMEM61Q8N0U2 210 aa8.55□□□□□ -1.04
USP46-204ENST00000503060 MYO9AB2RTY4 2548 aa8.55□□□□□ -1.04
USP46-204ENST00000503060 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
USP46-204ENST00000503060 DEFB131AP59861 70 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 LGALS9BQ3B8N2 356 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 LGALS9CQ6DKI2 356 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 DYNLRB2Q8TF09 96 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 IGHV3-16A0A0C4DH30 117 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 KNCNA6PVL3 124 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 RNASE1P07998 156 aaKnown RBP8.54□□□□□ -1.04
USP46-204ENST00000503060 MGPP08493 103 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 C2orf48Q96LS8 159 aa8.54□□□□□ -1.04
USP46-204ENST00000503060 IGHV1OR15-1A0A075B7D0 117 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 CD28P10747 220 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 TTC32Q5I0X7 151 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms