RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 F6UB75 175 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 H7C423 109 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 TMEM256-PLSCR3K7ERE1 68 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 NXPH4O95158 308 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 PRSS1P07477 247 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 TMEM30BQ3MIR4 351 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 C19orf54Q5BKX5 351 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF818PQ6ZRF7 136 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF329Q86UD4 541 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 FAM223AQ8IWN6 122 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 Q8N7P7 452 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 SLC25A29Q8N8R3 303 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 TOMM6Q96B49 74 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 TTTY13Q9BZ97 58 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 CTSZQ9UBR2 303 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 COL6A5A8TX70 2615 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 PRRC2AP48634 2157 aaKnown RBP4.89□□□□□ -1.63
CLCN3-203ENST00000502998 TRAV7A0A075B6U4 112 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 TRAV12-1A0A0B4J245 112 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 STATHP02808 62 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 GLI4P10075 376 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF134P52741 427 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 PLGLAQ15195 96 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF876PQ49A33 203 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 ATP5EP2Q5VTU8 51 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 LYPD5Q6UWN5 251 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 Q6ZRM9 215 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 CCL17Q92583 94 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 Q96M66 194 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 TIMM17AQ99595 171 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 MRPL35Q9NZE8 188 aaKnown RBP4.89□□□□□ -1.63
CLCN3-203ENST00000502998 LINC00474Q9P2X8 69 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 X6R8D5 127 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 ATRQ13535 2644 aa4.89□□□□□ -1.63
CLCN3-203ENST00000502998 DOCK10Q96BY6 2186 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 CACNA1CQ13936 2221 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 IGHV3-20A0A0C4DH32 117 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 A0A1B0GUT8 65 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 FAM223BA6NKX1 122 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 FGF12P61328 243 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 TNP2Q05952 138 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 RHOHQ15669 191 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 Q1T7F1 81 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 KRTAP21-3Q3LHN1 58 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 S100A7L2Q5SY68 101 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 C16orf47Q6ZP98 133 aaPredicted RBP4.88□□□□□ -1.63
CLCN3-203ENST00000502998 ORMDL3Q8N138 153 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.88□□□□□ -1.63
CLCN3-203ENST00000502998 IMMP1LQ96LU5 166 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 C7orf69Q9H7B7 122 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 PROK2Q9HC23 129 aa4.88□□□□□ -1.63
CLCN3-203ENST00000502998 FN1P02751 2386 aaKnown RBP4.88□□□□□ -1.63
CLCN3-203ENST00000502998 A0A0G2JRQ6 117 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 LST1O00453 97 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 GHRHP01286 108 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 EDDM3BP56851 147 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 ESRGQ1W209 222 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 PAPPA-AS1Q5QFB9 102 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 SFTA2Q6UW10 78 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 C20orf197Q8N268 126 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 DYNLRB2Q8TF09 96 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 TMEM263Q8WUH6 116 aaKnown RBP4.87□□□□□ -1.63
CLCN3-203ENST00000502998 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
CLCN3-203ENST00000502998 FLNAP21333 2647 aaKnown RBP4.87□□□□□ -1.63
CLCN3-203ENST00000502998 NSD1Q96L73 2696 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF815PA8K554 130 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 A8MUN3 132 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 WISP2O76076 250 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 IGHV3-30P01768 117 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 IGHV3-30-5P0DP03 117 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 CXCL6P80162 114 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 DYNAPQ8N1N2 210 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF524Q96C55 264 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 MDFIQ99750 246 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 OPRPNQ99935 248 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-203ENST00000502998 UBE2D4Q9Y2X8 147 aa4.86□□□□□ -1.63
CLCN3-203ENST00000502998 HEATR5BQ9P2D3 2071 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 TRAV40A0A0B4J280 105 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 TRGV8A0A0C4DH27 118 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 TRBV10-3A0A0K0K1G6 114 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 TMEM30CPA0ZSE6 113 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 F8VRH5 84 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 M0R135 149 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 M0R381 172 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 IGHV4-39P01824 125 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF80P51504 273 aaPredicted RBP4.85□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF137PP52743 207 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 CLEC19AQ6UXS0 136 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 ZNF826PQ6ZT77 177 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 C7orf65Q6ZTY9 151 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 UBALD1Q8TB05 177 aa4.85□□□□□ -1.63
CLCN3-203ENST00000502998 ITLN2Q8WWU7 325 aaPredicted RBP4.85□□□□□ -1.63
CLCN3-203ENST00000502998 HEATR1Q9H583 2144 aaKnown RBP4.85□□□□□ -1.63
CLCN3-203ENST00000502998 ARID1AO14497 2285 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 IGLV3-32A0A0A0MS00 114 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 TRAV8-3A0A0A6YYJ7 113 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 IGLV1-36A0A0B4J1U3 117 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms