RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 NBEAL1Q6ZS30 2694 aa-0.82□□□□□ -2.54
SMAD1-203ENST00000502342 S100GP29377 79 aa-0.82□□□□□ -2.54
SMAD1-203ENST00000502342 MAGOHBQ96A72 148 aaKnown RBP-0.82□□□□□ -2.54
SMAD1-203ENST00000502342 SPCS1Q9Y6A9 102 aa-0.82□□□□□ -2.54
SMAD1-203ENST00000502342 SIPA1L3O60292 1781 aaPredicted RBP-0.83□□□□□ -2.54
SMAD1-203ENST00000502342 SMIM6P0DI80 62 aa-0.83□□□□□ -2.54
SMAD1-203ENST00000502342 TMEM244Q5VVB8 128 aa-0.83□□□□□ -2.54
SMAD1-203ENST00000502342 PPP1R2P3Q6NXS1 205 aa-0.83□□□□□ -2.54
SMAD1-203ENST00000502342 SETXQ7Z333 2677 aaKnown RBP-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 FAM92AA1XBS5 289 aa-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 APOC4-APOC2K7ER74 178 aa-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 M0R2P5 195 aa-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 NPFFO15130 113 aa-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 SPRR2BP35325 72 aa-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 RPL7L1Q6DKI1 246 aaKnown RBP-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 SKA2Q8WVK7 121 aaPredicted RBP-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 NPVFQ9HCQ7 196 aa-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 ZNF609O15014 1411 aa-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 EP300Q09472 2414 aaPredicted RBP-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 IBTKQ9P2D0 1353 aaPredicted RBP-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 PBRM1Q86U86 1689 aa-0.84□□□□□ -2.54
SMAD1-203ENST00000502342 XIRP1Q702N8 1843 aaKnown RBP-0.85□□□□□ -2.54
SMAD1-203ENST00000502342 CMPK1P30085 196 aa-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 ATRQ13535 2644 aa-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 TCTE3Q8IZS6 198 aa-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 WFDC6Q9BQY6 131 aa-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 SCN3BQ9NY72 215 aa-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 IFT172Q9UG01 1749 aa-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 NDUFA12Q9UI09 145 aa-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 LSM2Q9Y333 95 aaKnown RBP-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 V9GYQ6 96 aa-0.85□□□□□ -2.55
SMAD1-203ENST00000502342 ERCC6Q03468 1493 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 TRAV36DV7A0A075B6V5 113 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 FXYD6-FXYD2A0A087WZ82 144 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 TFAMQ00059 246 aaKnown RBP-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 LINC01545Q5VT33 79 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 CFAP126Q5VTH2 177 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 RPRMQ9NS64 109 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 LRP1BQ9NZR2 4599 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 ZMYM4Q5VZL5 1548 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 CREBBPQ92793 2442 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 BCL9LQ86UU0 1499 aa-0.86□□□□□ -2.55
SMAD1-203ENST00000502342 USF3Q68DE3 2245 aa-0.87□□□□□ -2.55
SMAD1-203ENST00000502342 C10orf71Q711Q0 1435 aa-0.87□□□□□ -2.55
SMAD1-203ENST00000502342 MUC22E2RYF6 1773 aaPredicted RBP-0.87□□□□□ -2.55
SMAD1-203ENST00000502342 LOC730098B7Z3J9 87 aa-0.87□□□□□ -2.55
SMAD1-203ENST00000502342 SPANXN1Q5VSR9 72 aa-0.87□□□□□ -2.55
SMAD1-203ENST00000502342 BAGE3Q86Y29 109 aa-0.87□□□□□ -2.55
SMAD1-203ENST00000502342 CENPHQ9H3R5 247 aa-0.87□□□□□ -2.55
SMAD1-203ENST00000502342 SMPXQ9UHP9 88 aa-0.87□□□□□ -2.55
SMAD1-203ENST00000502342 A6NIN4 97 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 TSTD3H0UI37 97 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 K7EQZ3 153 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 TNFSF15O95150 251 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 FABP1P07148 127 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 S100A3P33764 101 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 UBE2D1P51668 147 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 RPS28P62857 69 aaKnown RBP-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 Q5VV11 94 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 VSTM2AQ8TAG5 236 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 C10orf82Q8WW14 230 aa-0.88□□□□□ -2.55
SMAD1-203ENST00000502342 CHD8Q9HCK8 2581 aa-0.89□□□□□ -2.55
SMAD1-203ENST00000502342 A0A1B0GX51 115 aa-0.89□□□□□ -2.55
SMAD1-203ENST00000502342 IFNA17P01571 189 aa-0.89□□□□□ -2.55
SMAD1-203ENST00000502342 SCTP09683 121 aa-0.89□□□□□ -2.55
SMAD1-203ENST00000502342 DCDP81605 110 aaKnown RBP-0.89□□□□□ -2.55
SMAD1-203ENST00000502342 HIGD1AQ9Y241 93 aa-0.89□□□□□ -2.55
SMAD1-203ENST00000502342 WNK3Q9BYP7 1800 aa-0.89□□□□□ -2.55
SMAD1-203ENST00000502342 HERC1Q15751 4861 aa-0.9□□□□□ -2.55
SMAD1-203ENST00000502342 TRBV20-1A0A075B6N2 111 aa-0.9□□□□□ -2.55
SMAD1-203ENST00000502342 BCE1O60756 84 aa-0.9□□□□□ -2.55
SMAD1-203ENST00000502342 PIRTP0C851 137 aa-0.9□□□□□ -2.55
SMAD1-203ENST00000502342 HERC2O95714 4834 aa-0.9□□□□□ -2.55
SMAD1-203ENST00000502342 ERCC6L2Q5T890 1561 aa-0.91□□□□□ -2.55
SMAD1-203ENST00000502342 CNOT1A5YKK6 2376 aaKnown RBP-0.91□□□□□ -2.55
SMAD1-203ENST00000502342 RYR3Q15413 4870 aa-0.91□□□□□ -2.55
SMAD1-203ENST00000502342 CLPSL1A2RUU4 121 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 NCS1P62166 190 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 HAMPP81172 84 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 C9orf116Q5BN46 136 aaPredicted RBP-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 MIC13Q5XKP0 118 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 SMIM15Q7Z3B0 74 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 CTAGE3PQ8IX95 158 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 DDA1Q9BW61 102 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 TP53AIP1Q9HCN2 124 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 HSPB11Q9Y547 144 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 KDM3BQ7LBC6 1761 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 SYNJ1O43426 1573 aa-0.91□□□□□ -2.56
SMAD1-203ENST00000502342 LRRC37A3O60309 1634 aa-0.92□□□□□ -2.56
SMAD1-203ENST00000502342 LRP6O75581 1613 aa-0.92□□□□□ -2.56
SMAD1-203ENST00000502342 M0R129 80 aa-0.92□□□□□ -2.56
SMAD1-203ENST00000502342 SAR1AQ9NR31 198 aa-0.92□□□□□ -2.56
SMAD1-203ENST00000502342 GINS2Q9Y248 185 aa-0.92□□□□□ -2.56
SMAD1-203ENST00000502342 MYH13Q9UKX3 1938 aa-0.93□□□□□ -2.56
SMAD1-203ENST00000502342 PLXNB2O15031 1838 aa-0.93□□□□□ -2.56
SMAD1-203ENST00000502342 UBE2G1P62253 170 aa-0.93□□□□□ -2.56
SMAD1-203ENST00000502342 CCDC153Q494R4 210 aa-0.93□□□□□ -2.56
SMAD1-203ENST00000502342 MYO7BQ6PIF6 2116 aa-0.93□□□□□ -2.56
SMAD1-203ENST00000502342 SPTSSBQ8NFR3 76 aa-0.93□□□□□ -2.56
SMAD1-203ENST00000502342 NF1P21359 2839 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 251.6 ms