RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
PBX1-211ENST00000498497 LINC01559Q495D7 138 aa8.78□□□□□ -1
PBX1-211ENST00000498497 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
PBX1-211ENST00000498497 A0A0B4J2C4 111 aa8.77□□□□□ -1.01
PBX1-211ENST00000498497 A0A0J9YXY3 114 aa8.77□□□□□ -1.01
PBX1-211ENST00000498497 RPL18AQ02543 176 aaKnown RBP8.77□□□□□ -1.01
PBX1-211ENST00000498497 AMELXQ99217 191 aa8.77□□□□□ -1.01
PBX1-211ENST00000498497 TRBV30A0A0K0K1B3 111 aa8.77□□□□□ -1.01
PBX1-211ENST00000498497 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
PBX1-211ENST00000498497 LST1O00453 97 aa8.77□□□□□ -1.01
PBX1-211ENST00000498497 BAALC-AS2P0C853 105 aa8.77□□□□□ -1.01
PBX1-211ENST00000498497 DCHS2Q6V1P9 2916 aa8.77□□□□□ -1.01
PBX1-211ENST00000498497 DNAL4O96015 105 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 AVPP01185 164 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 CGB3P0DN86 165 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 CGB7P0DN87 165 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 LINC00482Q8N8I6 264 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 SNURFQ9Y675 71 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 MRPS21P82921 87 aaKnown RBP8.76□□□□□ -1.01
PBX1-211ENST00000498497 GFRALQ6UXV0 394 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 FAM240AA0A1B0GVK7 77 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 CCL11P51671 97 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 CCL17Q92583 94 aa8.76□□□□□ -1.01
PBX1-211ENST00000498497 IGHV7-4-1A0A0J9YVY3 117 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 BUB1B-PAK6H3BSN5 160 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 GNRH2O43555 120 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 SOSTDC1Q6X4U4 206 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 SERP2Q8N6R1 65 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 GAFA1Q96PS6 74 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 RETNQ9HD89 108 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 IGKV3-15P01624 115 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 C9orf139Q6ZV77 190 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 MDS2Q8NDY4 140 aa8.75□□□□□ -1.01
PBX1-211ENST00000498497 I3L2K1 104 aa8.74□□□□□ -1.01
PBX1-211ENST00000498497 K7EIM0 57 aa8.74□□□□□ -1.01
PBX1-211ENST00000498497 ZNF833PQ6ZTB9 187 aa8.74□□□□□ -1.01
PBX1-211ENST00000498497 RNASE1P07998 156 aaKnown RBP8.74□□□□□ -1.01
PBX1-211ENST00000498497 PRR9Q5T870 116 aa8.74□□□□□ -1.01
PBX1-211ENST00000498497 IMUPQ9GZP8 106 aa8.74□□□□□ -1.01
PBX1-211ENST00000498497 LINC01546A6NGU7 62 aa8.74□□□□□ -1.01
PBX1-211ENST00000498497 C9orf129Q5T035 196 aaKnown RBP8.74□□□□□ -1.01
PBX1-211ENST00000498497 PRORYQ9H606 182 aa8.74□□□□□ -1.01
PBX1-211ENST00000498497 CSMD2Q7Z408 3487 aa8.73□□□□□ -1.01
PBX1-211ENST00000498497 RPL11P62913 178 aaKnown RBP8.73□□□□□ -1.01
PBX1-211ENST00000498497 TMEM200BQ69YZ2 307 aa8.73□□□□□ -1.01
PBX1-211ENST00000498497 PRO3102Q9H379 93 aa8.73□□□□□ -1.01
PBX1-211ENST00000498497 GHRHP01286 108 aa8.73□□□□□ -1.01
PBX1-211ENST00000498497 C9orf47Q6ZRZ4 202 aa8.73□□□□□ -1.01
PBX1-211ENST00000498497 Q8N2B8 174 aa8.73□□□□□ -1.01
PBX1-211ENST00000498497 SLC50A1Q9BRV3 221 aa8.73□□□□□ -1.01
PBX1-211ENST00000498497 SMAD5-AS1Q9Y6J3 95 aa8.73□□□□□ -1.01
PBX1-211ENST00000498497 NDUFA12Q9UI09 145 aa8.72□□□□□ -1.01
PBX1-211ENST00000498497 SONP18583 2426 aaKnown RBP8.72□□□□□ -1.01
PBX1-211ENST00000498497 TEX22C9J3V5 150 aa8.72□□□□□ -1.01
PBX1-211ENST00000498497 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
PBX1-211ENST00000498497 MRGPRG-AS1Q2M3A8 158 aa8.72□□□□□ -1.01
PBX1-211ENST00000498497 LYPD2Q6UXB3 125 aa8.72□□□□□ -1.01
PBX1-211ENST00000498497 LYPD1Q8N2G4 141 aa8.72□□□□□ -1.01
PBX1-211ENST00000498497 C9orf85Q96MD7 179 aa8.72□□□□□ -1.01
PBX1-211ENST00000498497 KLK9Q9UKQ9 250 aa8.71□□□□□ -1.01
PBX1-211ENST00000498497 NBL1P41271 181 aa8.71□□□□□ -1.01
PBX1-211ENST00000498497 TECTAO75443 2155 aa8.71□□□□□ -1.02
PBX1-211ENST00000498497 TRBV6-1A0A0K0K1D8 114 aa8.71□□□□□ -1.02
PBX1-211ENST00000498497 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
PBX1-211ENST00000498497 F6UB75 175 aa8.71□□□□□ -1.02
PBX1-211ENST00000498497 RNASE4P34096 147 aaKnown RBP8.71□□□□□ -1.02
PBX1-211ENST00000498497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.71□□□□□ -1.02
PBX1-211ENST00000498497 WNK1Q9H4A3 2382 aa8.71□□□□□ -1.02
PBX1-211ENST00000498497 ACACAQ13085 2346 aa8.71□□□□□ -1.02
PBX1-211ENST00000498497 ZFHX3Q15911 3703 aa8.7□□□□□ -1.02
PBX1-211ENST00000498497 IGHV3-73A0A0B4J1V6 119 aa8.7□□□□□ -1.02
PBX1-211ENST00000498497 IGHV1-18A0A0C4DH31 117 aa8.7□□□□□ -1.02
PBX1-211ENST00000498497 CNFNQ9BYD5 112 aa8.7□□□□□ -1.02
PBX1-211ENST00000498497 LINC00846Q9NV44 126 aa8.7□□□□□ -1.02
PBX1-211ENST00000498497 C5orf38Q86SI9 138 aa8.7□□□□□ -1.02
PBX1-211ENST00000498497 PRSS33Q8NF86 280 aa8.7□□□□□ -1.02
PBX1-211ENST00000498497 RAI1Q7Z5J4 1906 aaPredicted RBP8.7□□□□□ -1.02
PBX1-211ENST00000498497 LHBP01229 141 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 HTN1P15515 57 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 SAP25Q8TEE9 199 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 SPRR3Q9UBC9 169 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 SPG11Q96JI7 2443 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 IGIPA6NJ69 53 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 LEPROTO15243 131 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 IGKV3-20P01619 116 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 SLPIP03973 132 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 ATP5G1P05496 136 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 ATP1A1-AS1Q5TC04 95 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 DCANP1Q8TF63 244 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 FAM218AQ96MZ4 157 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 SIRPDQ9H106 197 aa8.69□□□□□ -1.02
PBX1-211ENST00000498497 ANKRD17O75179 2603 aaKnown RBP8.68□□□□□ -1.02
PBX1-211ENST00000498497 ACYP1P07311 99 aa8.68□□□□□ -1.02
PBX1-211ENST00000498497 PAPPA-AS1Q5QFB9 102 aa8.68□□□□□ -1.02
PBX1-211ENST00000498497 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
PBX1-211ENST00000498497 MUC4Q99102 2169 aa8.68□□□□□ -1.02
PBX1-211ENST00000498497 BDP1A6H8Y1 2624 aa8.68□□□□□ -1.02
PBX1-211ENST00000498497 NCR3O14931 201 aa8.68□□□□□ -1.02
PBX1-211ENST00000498497 TMEM61Q8N0U2 210 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms