RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SMIM15Q7Z3B0 74 aa8.63□□□□□ -1.03
HSPG2-213ENST00000498495 DNAJC30Q96LL9 226 aa8.63□□□□□ -1.03
HSPG2-213ENST00000498495 CNFNQ9BYD5 112 aa8.63□□□□□ -1.03
HSPG2-213ENST00000498495 C9JQL5 133 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 M0QY20 66 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 FOXA3P55318 350 aaPredicted RBP8.62□□□□□ -1.03
HSPG2-213ENST00000498495 SRSF3P84103 164 aaKnown RBP8.62□□□□□ -1.03
HSPG2-213ENST00000498495 CT83Q5H943 113 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 SUMO4Q6EEV6 95 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 KCNIP4Q6PIL6 250 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 DAZ4Q86SG3 579 aaKnown RBP8.62□□□□□ -1.03
HSPG2-213ENST00000498495 C15orf54Q8N8G6 183 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 BORCS7Q96B45 105 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 DAZ3Q9NR90 486 aaKnown RBP8.62□□□□□ -1.03
HSPG2-213ENST00000498495 OSTCQ9NRP0 149 aa8.62□□□□□ -1.03
HSPG2-213ENST00000498495 A0A087WX48 190 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 C16orf90A8MZG2 172 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 PSCAO43653 123 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 RAB14P61106 215 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 TMEM97Q5BJF2 176 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 NIT1Q86X76 327 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 Q8N3U1 123 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 Q9HAA7 133 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
HSPG2-213ENST00000498495 RPL23P62829 140 aaKnown RBP8.6□□□□□ -1.03
HSPG2-213ENST00000498495 LAGE3Q14657 143 aa8.6□□□□□ -1.03
HSPG2-213ENST00000498495 RASL11AQ6T310 242 aa8.6□□□□□ -1.03
HSPG2-213ENST00000498495 TSKUQ8WUA8 353 aa8.6□□□□□ -1.03
HSPG2-213ENST00000498495 ISOC2Q96AB3 205 aa8.6□□□□□ -1.03
HSPG2-213ENST00000498495 GFRA4Q9GZZ7 299 aa8.6□□□□□ -1.03
HSPG2-213ENST00000498495 NIT2Q9NQR4 276 aa8.6□□□□□ -1.03
HSPG2-213ENST00000498495 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
HSPG2-213ENST00000498495 FAM231BA6NCW3 169 aa8.59□□□□□ -1.03
HSPG2-213ENST00000498495 ELOBQ15370 118 aa8.59□□□□□ -1.03
HSPG2-213ENST00000498495 ADIRFQ15847 76 aa8.59□□□□□ -1.03
HSPG2-213ENST00000498495 TM2D2Q9BX73 214 aa8.59□□□□□ -1.03
HSPG2-213ENST00000498495 PKD1P98161 4303 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 A0A087WTM6 91 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 HIGD1CA8MV81 97 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 KRTAP10-2P60368 255 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 CHCHD5Q9BSY4 110 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 CHCHD7Q9BUK0 85 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 PGPEP1Q9NXJ5 209 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 KLK12Q9UKR0 248 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 V9GYV3 84 aa8.58□□□□□ -1.04
HSPG2-213ENST00000498495 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
HSPG2-213ENST00000498495 TRBV25-1A0A075B6N4 114 aa8.57□□□□□ -1.04
HSPG2-213ENST00000498495 A0A1B0GUT8 65 aa8.57□□□□□ -1.04
HSPG2-213ENST00000498495 PKIAP61925 76 aa8.57□□□□□ -1.04
HSPG2-213ENST00000498495 NTM-AS1Q6ZSK4 140 aa8.57□□□□□ -1.04
HSPG2-213ENST00000498495 FRZBQ92765 325 aa8.57□□□□□ -1.04
HSPG2-213ENST00000498495 GATD1Q8NB37 220 aa8.56□□□□□ -1.04
HSPG2-213ENST00000498495 RMI2Q96E14 147 aa8.56□□□□□ -1.04
HSPG2-213ENST00000498495 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
HSPG2-213ENST00000498495 IGHV1-24A0A0C4DH33 117 aa8.55□□□□□ -1.04
HSPG2-213ENST00000498495 RIGQ13278 110 aa8.55□□□□□ -1.04
HSPG2-213ENST00000498495 ATRAIDQ6UW56 229 aa8.55□□□□□ -1.04
HSPG2-213ENST00000498495 NUP35Q8NFH5 326 aa8.55□□□□□ -1.04
HSPG2-213ENST00000498495 UBE2WQ96B02 151 aa8.55□□□□□ -1.04
HSPG2-213ENST00000498495 NAT8BQ9UHF3 227 aa8.55□□□□□ -1.04
HSPG2-213ENST00000498495 COX11Q9Y6N1 276 aa8.55□□□□□ -1.04
HSPG2-213ENST00000498495 Q0VG73 95 aa8.54□□□□□ -1.04
HSPG2-213ENST00000498495 GAGE6Q13070 117 aa8.54□□□□□ -1.04
HSPG2-213ENST00000498495 IQCJQ1A5X6 159 aa8.54□□□□□ -1.04
HSPG2-213ENST00000498495 MPV17L2Q567V2 206 aa8.54□□□□□ -1.04
HSPG2-213ENST00000498495 TMEM191AQ9H0A3 160 aa8.54□□□□□ -1.04
HSPG2-213ENST00000498495 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
HSPG2-213ENST00000498495 LRCOL1A6NCL2 159 aa8.53□□□□□ -1.04
HSPG2-213ENST00000498495 ANGP03950 147 aaKnown RBP8.53□□□□□ -1.04
HSPG2-213ENST00000498495 FUSP35637 526 aaKnown RBP eCLIP8.53□□□□□ -1.04
HSPG2-213ENST00000498495 COTL1Q14019 142 aa8.53□□□□□ -1.04
HSPG2-213ENST00000498495 CLLU1Q5K131 121 aa8.53□□□□□ -1.04
HSPG2-213ENST00000498495 CDPF1Q6NVV7 123 aa8.53□□□□□ -1.04
HSPG2-213ENST00000498495 DEFB104AQ8WTQ1 72 aa8.53□□□□□ -1.04
HSPG2-213ENST00000498495 RPL39LQ96EH5 51 aaKnown RBP8.53□□□□□ -1.04
HSPG2-213ENST00000498495 SMIM27A0A1W2PRY6 76 aa8.52□□□□□ -1.05
HSPG2-213ENST00000498495 CRPP02741 224 aa8.52□□□□□ -1.05
HSPG2-213ENST00000498495 Q8N976 141 aa8.52□□□□□ -1.05
HSPG2-213ENST00000498495 TMEM243Q9BU79 118 aa8.52□□□□□ -1.05
HSPG2-213ENST00000498495 DYNC1H1Q14204 4646 aaKnown RBP8.51□□□□□ -1.05
HSPG2-213ENST00000498495 DNAH11Q96DT5 4516 aa8.51□□□□□ -1.05
HSPG2-213ENST00000498495 UBE2L6O14933 153 aa8.51□□□□□ -1.05
HSPG2-213ENST00000498495 RAB4AP20338 218 aa8.51□□□□□ -1.05
HSPG2-213ENST00000498495 RBX1P62877 108 aa8.51□□□□□ -1.05
HSPG2-213ENST00000498495 ENHOQ6UWT2 76 aa8.51□□□□□ -1.05
HSPG2-213ENST00000498495 AMN1Q8IY45 258 aa8.51□□□□□ -1.05
HSPG2-213ENST00000498495 SDHAF1A6NFY7 115 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 PMCHP20382 165 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 AMTP48728 403 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 IFITM2Q01629 132 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 Q8N814 137 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 BAALCQ8WXS3 180 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 RNF185Q96GF1 192 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 C1orf43Q9BWL3 253 aa8.5□□□□□ -1.05
HSPG2-213ENST00000498495 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms