RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 SMIM12Q96EX1 92 aa10.43□□□□□ -0.74
MUC1-220ENST00000498431 IGKV3D-20A0A0C4DH25 116 aa10.42□□□□□ -0.74
MUC1-220ENST00000498431 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
MUC1-220ENST00000498431 A8MWV9 139 aa10.42□□□□□ -0.74
MUC1-220ENST00000498431 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
MUC1-220ENST00000498431 ZC2HC1AQ96GY0 325 aa10.42□□□□□ -0.74
MUC1-220ENST00000498431 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
MUC1-220ENST00000498431 URGCP-MRPS24S4R325 110 aa10.42□□□□□ -0.74
MUC1-220ENST00000498431 FABP5P3A8MUU1 101 aa10.41□□□□□ -0.74
MUC1-220ENST00000498431 ZNF727A8MUV8 499 aa10.41□□□□□ -0.74
MUC1-220ENST00000498431 RPL37AP61513 92 aaKnown RBP10.41□□□□□ -0.74
MUC1-220ENST00000498431 FAM74A3Q4VXF1 159 aa10.41□□□□□ -0.74
MUC1-220ENST00000498431 UQCC3Q6UW78 93 aa10.41□□□□□ -0.74
MUC1-220ENST00000498431 COMMD7Q86VX2 200 aa10.41□□□□□ -0.74
MUC1-220ENST00000498431 SMIM7Q9BQ49 75 aa10.41□□□□□ -0.74
MUC1-220ENST00000498431 BIN3Q9NQY0 253 aa10.41□□□□□ -0.74
MUC1-220ENST00000498431 TRBV20OR9-2A0A075B6H5 130 aa10.4□□□□□ -0.74
MUC1-220ENST00000498431 S100A4P26447 101 aaKnown RBP10.4□□□□□ -0.74
MUC1-220ENST00000498431 FAM162BQ5T6X4 162 aa10.4□□□□□ -0.74
MUC1-220ENST00000498431 ATRAIDQ6UW56 229 aa10.4□□□□□ -0.74
MUC1-220ENST00000498431 SH2D1AO60880 128 aa10.39□□□□□ -0.75
MUC1-220ENST00000498431 CRIP1P50238 77 aa10.39□□□□□ -0.75
MUC1-220ENST00000498431 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
MUC1-220ENST00000498431 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
MUC1-220ENST00000498431 LRP2P98164 4655 aa10.39□□□□□ -0.75
MUC1-220ENST00000498431 MT1HL1P0DM35 61 aa10.38□□□□□ -0.75
MUC1-220ENST00000498431 ASIPP42127 132 aa10.38□□□□□ -0.75
MUC1-220ENST00000498431 TMEM241Q24JQ0 296 aa10.38□□□□□ -0.75
MUC1-220ENST00000498431 PRR27Q6MZM9 219 aa10.38□□□□□ -0.75
MUC1-220ENST00000498431 OCC1Q8TAD7 63 aa10.38□□□□□ -0.75
MUC1-220ENST00000498431 A0A087WX48 190 aa10.37□□□□□ -0.75
MUC1-220ENST00000498431 H3BVH4 76 aa10.37□□□□□ -0.75
MUC1-220ENST00000498431 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
MUC1-220ENST00000498431 IL36BQ9NZH7 164 aa10.37□□□□□ -0.75
MUC1-220ENST00000498431 A0A087WWL8 130 aa10.36□□□□□ -0.75
MUC1-220ENST00000498431 ENHOQ6UWT2 76 aa10.36□□□□□ -0.75
MUC1-220ENST00000498431 NAT8Q9UHE5 227 aa10.36□□□□□ -0.75
MUC1-220ENST00000498431 TNXBP22105 4242 aa10.36□□□□□ -0.75
MUC1-220ENST00000498431 RNF213Q63HN8 5207 aa10.36□□□□□ -0.75
MUC1-220ENST00000498431 K7EN84 100 aa10.35□□□□□ -0.75
MUC1-220ENST00000498431 RHODO00212 210 aa10.35□□□□□ -0.75
MUC1-220ENST00000498431 LINC01551Q86U37 167 aa10.35□□□□□ -0.75
MUC1-220ENST00000498431 CHCHD7Q9BUK0 85 aa10.35□□□□□ -0.75
MUC1-220ENST00000498431 TMEM218A2RU14 115 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 C19orf71A6NCJ1 209 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 B4DEV8 164 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 PANO1I0J062 215 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 M0R036 132 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 ARMS2P0C7Q2 107 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 Q0VG73 95 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 ELOBQ15370 118 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 C14orf177Q52M58 125 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 C1orf43Q9BWL3 253 aa10.34□□□□□ -0.75
MUC1-220ENST00000498431 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
MUC1-220ENST00000498431 GRIFINA4D1Z8 144 aa10.33□□□□□ -0.76
MUC1-220ENST00000498431 KRBOX1C9JBD0 128 aa10.33□□□□□ -0.76
MUC1-220ENST00000498431 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
MUC1-220ENST00000498431 PRSS1P07477 247 aa10.33□□□□□ -0.76
MUC1-220ENST00000498431 SFRP2Q96HF1 295 aa10.33□□□□□ -0.76
MUC1-220ENST00000498431 P01737 135 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 HLA-DQA1P01909 254 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 UBE2D3P61077 147 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 RPL23P62829 140 aaKnown RBP10.32□□□□□ -0.76
MUC1-220ENST00000498431 UBE2D2P62837 147 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 ADIRFQ15847 76 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 MPV17L2Q567V2 206 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 DNLZQ5SXM8 178 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 KCNIP4Q6PIL6 250 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 NUDT10Q8NFP7 164 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 NUDT11Q96G61 164 aa10.32□□□□□ -0.76
MUC1-220ENST00000498431 TMSB15BA0A087X1C1 80 aa10.31□□□□□ -0.76
MUC1-220ENST00000498431 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
MUC1-220ENST00000498431 RPS20P60866 119 aaKnown RBP10.31□□□□□ -0.76
MUC1-220ENST00000498431 FAM231DQ6ZW35 169 aa10.31□□□□□ -0.76
MUC1-220ENST00000498431 OR2D3Q8NGH3 330 aa10.31□□□□□ -0.76
MUC1-220ENST00000498431 RNASE7Q9H1E1 156 aaKnown RBP10.31□□□□□ -0.76
MUC1-220ENST00000498431 XKRY2A2RUG3 117 aa10.3□□□□□ -0.76
MUC1-220ENST00000498431 F8W036 122 aa10.3□□□□□ -0.76
MUC1-220ENST00000498431 M0R381 172 aa10.3□□□□□ -0.76
MUC1-220ENST00000498431 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
MUC1-220ENST00000498431 CXCL1P09341 107 aa10.3□□□□□ -0.76
MUC1-220ENST00000498431 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
MUC1-220ENST00000498431 RPL19P84098 196 aaKnown RBP10.3□□□□□ -0.76
MUC1-220ENST00000498431 NDUFA5Q16718 116 aa10.3□□□□□ -0.76
MUC1-220ENST00000498431 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
MUC1-220ENST00000498431 ISOC2Q96AB3 205 aa10.3□□□□□ -0.76
MUC1-220ENST00000498431 OSTCQ9NRP0 149 aa10.3□□□□□ -0.76
MUC1-220ENST00000498431 TRBV7-3A0A075B6L6 115 aa10.29□□□□□ -0.76
MUC1-220ENST00000498431 TRBV6-8A0A0A6YYG3 113 aa10.29□□□□□ -0.76
MUC1-220ENST00000498431 TRBV10-1A0A0K0K1A3 114 aa10.29□□□□□ -0.76
MUC1-220ENST00000498431 CRPP02741 224 aa10.29□□□□□ -0.76
MUC1-220ENST00000498431 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
MUC1-220ENST00000498431 PNRC1Q12796 327 aaPredicted RBP10.29□□□□□ -0.76
MUC1-220ENST00000498431 C9orf163Q8N9P6 203 aa10.29□□□□□ -0.76
MUC1-220ENST00000498431 SEC11CQ9BY50 192 aa10.29□□□□□ -0.76
MUC1-220ENST00000498431 RPP21Q9H633 154 aaKnown RBP10.29□□□□□ -0.76
MUC1-220ENST00000498431 PHLDA3Q9Y5J5 127 aa10.29□□□□□ -0.76
MUC1-220ENST00000498431 ADCYAP1P18509 176 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms