RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 SCN9AQ15858 1988 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 RGPD8O14715 1765 aaPredicted RBP1.88□□□□□ -2.11
CALD1-224ENST00000498254 RGPD5Q99666 1765 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 IGLV10-54A0A075B6I4 117 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 IGHV3-73A0A0B4J1V6 119 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 LOC107984156A0A0G2JMH3 177 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 SDHAF1A6NFY7 115 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 C3orf84H3BNL1 204 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 PSCAO43653 123 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 PEBP1P30086 187 aaKnown RBP1.88□□□□□ -2.11
CALD1-224ENST00000498254 ZNF791Q3KP31 576 aaPredicted RBP1.88□□□□□ -2.11
CALD1-224ENST00000498254 C12orf73Q69YU5 71 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 ATP11AUNQ6ZP68 121 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 BAGE3Q86Y29 109 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 BAGE2Q86Y30 109 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 ARL17AQ8IVW1 177 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 CHCHD1Q96BP2 118 aaKnown RBP1.88□□□□□ -2.11
CALD1-224ENST00000498254 SLC50A1Q9BRV3 221 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 C11orf1Q9H5F2 150 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 ARFGEF1Q9Y6D6 1849 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 PTPRMP28827 1452 aa1.88□□□□□ -2.11
CALD1-224ENST00000498254 TRPM2O94759 1503 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 TANC2Q9HCD6 1990 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 SNRNP200O75643 2136 aaKnown RBP1.87□□□□□ -2.11
CALD1-224ENST00000498254 IGHV1-24A0A0C4DH33 117 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 A0A0D9SFI3 127 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 A0A1W2PNM2 257 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 B4DSR2 109 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 E7EQL1 145 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 F2Z2F3 143 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 FXYD1O00168 92 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 IGKV4-1P06312 121 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 P0C880 135 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 NPPCP23582 126 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 ZNF117Q03924 483 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.87□□□□□ -2.11
CALD1-224ENST00000498254 LYPD5Q6UWN5 251 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 BRD3OSQ6XYD6 125 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 CYP2G1PQ6ZSU1 146 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 FAM223AQ8IWN6 122 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 LINC00269Q8N2A0 174 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 CCL4L1Q8NHW4 92 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 PTPRDP23468 1912 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 ANKRD36CQ5JPF3 1778 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 ALKQ9UM73 1620 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 PTPRBP23467 1997 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 TSC2P49815 1807 aa1.87□□□□□ -2.11
CALD1-224ENST00000498254 MYOM1P52179 1685 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 COL4A4P53420 1690 aaPredicted RBP1.86□□□□□ -2.11
CALD1-224ENST00000498254 HEATR5AQ86XA9 2040 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 CDC42BPGQ6DT37 1551 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 STRCP1A6NGW2 1772 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 TMSB15BA0A087X1C1 80 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 IGKV3D-11A0A0A0MRZ8 115 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 C17orf51A8MQB3 221 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 SAA1P0DJI8 122 aaPredicted RBP1.86□□□□□ -2.11
CALD1-224ENST00000498254 CCL3P10147 92 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 PIPP12273 146 aaPredicted RBP1.86□□□□□ -2.11
CALD1-224ENST00000498254 CCL5P13501 91 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 RPL27AP46776 148 aaKnown RBP1.86□□□□□ -2.11
CALD1-224ENST00000498254 SUPT4H1P63272 117 aaKnown RBP1.86□□□□□ -2.11
CALD1-224ENST00000498254 Q1T7F1 81 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 TMEM170BQ5T4T1 132 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 SFTA2Q6UW10 78 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 C6orf201Q7Z4U5 140 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 SCGB3A1Q96QR1 104 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 RETNLBQ9BQ08 111 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 NHP2Q9NX24 153 aaKnown RBP1.86□□□□□ -2.11
CALD1-224ENST00000498254 NDUFA12Q9UI09 145 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 ZNF236Q9UL36 1845 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 ALS2Q96Q42 1657 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 NFAT5O94916 1531 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 KCPQ6ZWJ8 1503 aa1.86□□□□□ -2.11
CALD1-224ENST00000498254 PHRF1Q9P1Y6 1649 aaKnown RBP1.85□□□□□ -2.11
CALD1-224ENST00000498254 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 TRAV3A0A0B4J244 114 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 H7BZZ5 65 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 CXCL8P10145 99 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 DEFA4P12838 97 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 GCHFRP30047 84 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 XCL1P47992 114 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 FXYD2P54710 66 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 ESRGQ1W209 222 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 LINC00643Q86TS7 51 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 SPTSSBQ8NFR3 76 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 LINC01600Q96MT4 127 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 BPESC1Q9GZL8 116 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 PROK2Q9HC23 129 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 MRPL35Q9NZE8 188 aaKnown RBP1.85□□□□□ -2.11
CALD1-224ENST00000498254 GNG13Q9P2W3 67 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 AGLP35573 1532 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 NEXMIFQ5QGS0 1516 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 CASP8AP2Q9UKL3 1982 aa1.85□□□□□ -2.11
CALD1-224ENST00000498254 AFDNP55196 1824 aaKnown RBP1.84□□□□□ -2.11
CALD1-224ENST00000498254 SLX4Q8IY92 1834 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 TOP2BQ02880 1626 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 EIF2AK4Q9P2K8 1649 aaKnown RBP1.84□□□□□ -2.11
CALD1-224ENST00000498254 PLXNA1Q9UIW2 1896 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 PLCH1Q4KWH8 1693 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 KIAA2026Q5HYC2 2103 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms