RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TMEM242Q9NWH2 141 aa12.46□□□□□ -0.41
PRKCB-209ENST00000498058 SMIM27A0A1W2PRY6 76 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 CRYGDP07320 174 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 EVI2AP22794 236 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 Q5VSD8 79 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 KCNIP4Q6PIL6 250 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 LYZL1Q6UWQ5 148 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 IMMP2LQ96T52 175 aa12.45□□□□□ -0.42
PRKCB-209ENST00000498058 LRCOL1A6NCL2 159 aa12.44□□□□□ -0.42
PRKCB-209ENST00000498058 M0R381 172 aa12.44□□□□□ -0.42
PRKCB-209ENST00000498058 GATA1P15976 413 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-209ENST00000498058 HAMPP81172 84 aa12.44□□□□□ -0.42
PRKCB-209ENST00000498058 GTSF1Q8WW33 167 aa12.44□□□□□ -0.42
PRKCB-209ENST00000498058 PGLYRP4Q96LB8 373 aa12.44□□□□□ -0.42
PRKCB-209ENST00000498058 DNAH8Q96JB1 4490 aa12.44□□□□□ -0.42
PRKCB-209ENST00000498058 K7EP13 123 aa12.43□□□□□ -0.42
PRKCB-209ENST00000498058 SMR3BP02814 79 aaPredicted RBP12.43□□□□□ -0.42
PRKCB-209ENST00000498058 S100PP25815 95 aa12.43□□□□□ -0.42
PRKCB-209ENST00000498058 OR10AG1Q8NH19 301 aa12.43□□□□□ -0.42
PRKCB-209ENST00000498058 A0A1B0GUT8 65 aa12.42□□□□□ -0.42
PRKCB-209ENST00000498058 A8MWV9 139 aa12.42□□□□□ -0.42
PRKCB-209ENST00000498058 S100A1P23297 94 aa12.42□□□□□ -0.42
PRKCB-209ENST00000498058 CNFNQ9BYD5 112 aa12.42□□□□□ -0.42
PRKCB-209ENST00000498058 MYCBP2O75592 4640 aa12.41□□□□□ -0.42
PRKCB-209ENST00000498058 FLG2Q5D862 2391 aaPredicted RBP12.41□□□□□ -0.42
PRKCB-209ENST00000498058 TRGC1P0CF51 173 aa12.41□□□□□ -0.42
PRKCB-209ENST00000498058 GCSHP23434 173 aa12.41□□□□□ -0.42
PRKCB-209ENST00000498058 TIRAPP58753 221 aa12.41□□□□□ -0.42
PRKCB-209ENST00000498058 RIGQ13278 110 aa12.41□□□□□ -0.42
PRKCB-209ENST00000498058 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
PRKCB-209ENST00000498058 SLC25A29Q8N8R3 303 aa12.41□□□□□ -0.42
PRKCB-209ENST00000498058 NUP35Q8NFH5 326 aa12.41□□□□□ -0.42
PRKCB-209ENST00000498058 TRAV9-1A0A075B6T8 112 aa12.4□□□□□ -0.42
PRKCB-209ENST00000498058 IGHV3-38A0A0C4DH36 116 aa12.4□□□□□ -0.42
PRKCB-209ENST00000498058 A0A1B0GW15 77 aa12.4□□□□□ -0.42
PRKCB-209ENST00000498058 CIDEAO60543 219 aa12.4□□□□□ -0.42
PRKCB-209ENST00000498058 TWIST1Q15672 202 aa12.4□□□□□ -0.42
PRKCB-209ENST00000498058 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
PRKCB-209ENST00000498058 AP1S3Q96PC3 154 aa12.4□□□□□ -0.42
PRKCB-209ENST00000498058 IGHV3-73A0A0B4J1V6 119 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 MUC21A0A0G2JKD1 596 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 MUC21A0A140T8X8 626 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 RS1O15537 224 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 ATP6V1G1O75348 118 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 S100A8P05109 93 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 SMIM17P0DL12 118 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 NTF3P20783 257 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 SSTP61278 116 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 LINC01556Q5JQF7 62 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 CFAP126Q5VTH2 177 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 C10orf126Q8N4M7 172 aa12.39□□□□□ -0.43
PRKCB-209ENST00000498058 DMBT1Q9UGM3 2413 aaPredicted RBP12.39□□□□□ -0.43
PRKCB-209ENST00000498058 IBA57-AS1B1ANH7 110 aa12.38□□□□□ -0.43
PRKCB-209ENST00000498058 RHODO00212 210 aa12.38□□□□□ -0.43
PRKCB-209ENST00000498058 ATP5L2Q7Z4Y8 100 aa12.38□□□□□ -0.43
PRKCB-209ENST00000498058 FRZBQ92765 325 aa12.38□□□□□ -0.43
PRKCB-209ENST00000498058 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
PRKCB-209ENST00000498058 SRRM2Q9UQ35 2752 aaKnown RBP12.37□□□□□ -0.43
PRKCB-209ENST00000498058 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
PRKCB-209ENST00000498058 Q8N3U1 123 aa12.37□□□□□ -0.43
PRKCB-209ENST00000498058 IGHV3-30P01768 117 aa12.36□□□□□ -0.43
PRKCB-209ENST00000498058 IGHV3-33P01772 117 aa12.36□□□□□ -0.43
PRKCB-209ENST00000498058 IGHV3-30-3P0DP02 117 aa12.36□□□□□ -0.43
PRKCB-209ENST00000498058 IGHV3-30-5P0DP03 117 aa12.36□□□□□ -0.43
PRKCB-209ENST00000498058 ZFP2Q6ZN57 461 aa12.36□□□□□ -0.43
PRKCB-209ENST00000498058 Q6ZSN1 163 aa12.36□□□□□ -0.43
PRKCB-209ENST00000498058 Q9HAA7 133 aa12.36□□□□□ -0.43
PRKCB-209ENST00000498058 FAM30AQ9NZY2 134 aa12.36□□□□□ -0.43
PRKCB-209ENST00000498058 IGLV5-52A0A0A0MRZ9 124 aa12.35□□□□□ -0.43
PRKCB-209ENST00000498058 HBBP68871 147 aa12.35□□□□□ -0.43
PRKCB-209ENST00000498058 SMCO4Q9NRQ5 59 aa12.35□□□□□ -0.43
PRKCB-209ENST00000498058 TRBV6-4A0A1B0GX49 114 aa12.34□□□□□ -0.43
PRKCB-209ENST00000498058 PSCAO43653 123 aa12.34□□□□□ -0.43
PRKCB-209ENST00000498058 WFDC2Q14508 124 aa12.34□□□□□ -0.43
PRKCB-209ENST00000498058 OR10J3Q5JRS4 329 aa12.34□□□□□ -0.43
PRKCB-209ENST00000498058 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
PRKCB-209ENST00000498058 ATRAIDQ6UW56 229 aa12.34□□□□□ -0.43
PRKCB-209ENST00000498058 Q8N814 137 aa12.34□□□□□ -0.43
PRKCB-209ENST00000498058 URGCP-MRPS24S4R325 110 aa12.34□□□□□ -0.43
PRKCB-209ENST00000498058 RHOHQ15669 191 aa12.33□□□□□ -0.44
PRKCB-209ENST00000498058 LELP1Q5T871 98 aa12.33□□□□□ -0.44
PRKCB-209ENST00000498058 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
PRKCB-209ENST00000498058 RASL11AQ6T310 242 aa12.33□□□□□ -0.44
PRKCB-209ENST00000498058 C14orf178Q8N769 122 aaPredicted RBP12.33□□□□□ -0.44
PRKCB-209ENST00000498058 PRADC1Q9BSG0 188 aa12.33□□□□□ -0.44
PRKCB-209ENST00000498058 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
PRKCB-209ENST00000498058 Q9UF83 564 aa12.33□□□□□ -0.44
PRKCB-209ENST00000498058 A0A087WWL8 130 aa12.32□□□□□ -0.44
PRKCB-209ENST00000498058 TRAV8-6A0A0B4J262 113 aa12.32□□□□□ -0.44
PRKCB-209ENST00000498058 CAMPP49913 170 aa12.32□□□□□ -0.44
PRKCB-209ENST00000498058 TMEM191AQ9H0A3 160 aa12.32□□□□□ -0.44
PRKCB-209ENST00000498058 JPT2Q9H910 190 aa12.32□□□□□ -0.44
PRKCB-209ENST00000498058 A0A1B0GXF2 115 aa12.31□□□□□ -0.44
PRKCB-209ENST00000498058 ZNF56Q15929 161 aa12.31□□□□□ -0.44
PRKCB-209ENST00000498058 COX19Q49B96 90 aa12.31□□□□□ -0.44
PRKCB-209ENST00000498058 ATP6V0E2Q8NHE4 81 aa12.31□□□□□ -0.44
PRKCB-209ENST00000498058 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
PRKCB-209ENST00000498058 TMEM70Q9BUB7 260 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms