RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 SDHAF1A6NFY7 115 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 IGF1P05019 195 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 IGLC3P0DOY3 106 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 AZU1P20160 251 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 ANAPC13Q9BS18 74 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 IGHV7-4-1A0A0J9YVY3 117 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 A0A0J9YY99 117 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 F8W735 103 aaPredicted RBP6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 I3L3M4 83 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 AVPP01185 164 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 TMEM141Q96I45 108 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 TMEM243Q9BU79 118 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 SNHG12Q9BXW3 62 aa6.12□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE12BA1L429 117 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 PRAC2D3DTV9 90 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE7O76087 117 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE12FP0CL80 117 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE12GP0CL81 117 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE12IP0CL82 117 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 HIST1H4AP62805 103 aaKnown RBP6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 ZNF625Q96I27 306 aaPredicted RBP6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 KLK9Q9UKQ9 250 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 VWC2LB2RUY7 222 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 Q6YL49 198 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 UTP20O75691 2785 aaKnown RBP6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 TRAV8-3A0A0A6YYJ7 113 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 CTRLP40313 264 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 LINC00310P59036 64 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 PMVKQ15126 192 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 ZNF493Q6ZR52 646 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 Q8N8P6 123 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 ZNRF2Q8NHG8 242 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 Q9HAA7 133 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 IGHV3-16A0A0C4DH30 117 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 CRIP1P50238 77 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 KIR3DS1Q14943 382 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 NDUFA11Q86Y39 141 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 LINC00482Q8N8I6 264 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 RMI2Q96E14 147 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 CELSR3Q9NYQ7 3312 aa6.11□□□□□ -1.43
HLA-DMB-262ENST00000498020 TDRG1Q3Y452 100 aa6.1□□□□□ -1.43
HLA-DMB-262ENST00000498020 ANXA2RQ3ZCQ2 193 aa6.1□□□□□ -1.43
HLA-DMB-262ENST00000498020 C9orf47Q6ZRZ4 202 aa6.1□□□□□ -1.43
HLA-DMB-262ENST00000498020 FOXE3Q13461 319 aa6.1□□□□□ -1.43
HLA-DMB-262ENST00000498020 OCIAD2Q56VL3 154 aa6.1□□□□□ -1.43
HLA-DMB-262ENST00000498020 IGHV4OR15-8A0A075B7B6 117 aa6.1□□□□□ -1.43
HLA-DMB-262ENST00000498020 A0A087WW49 117 aa6.1□□□□□ -1.43
HLA-DMB-262ENST00000498020 KRTAP24-1Q3LI83 254 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 NPYP01303 97 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 DEFB125Q8N687 156 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 STPG4Q8N801 248 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 NKAPP1Q8N9T2 125 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 TRAV12-2A0A075B6T6 113 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 PFN2P35080 140 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 CCL18P55774 89 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 AJUBAQ96IF1 538 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 ZNF747Q9BV97 191 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 TMEM126AQ9H061 195 aa6.09□□□□□ -1.43
HLA-DMB-262ENST00000498020 TMEM89A2RUT3 159 aa6.09□□□□□ -1.44
HLA-DMB-262ENST00000498020 K7EMT4 169 aa6.09□□□□□ -1.44
HLA-DMB-262ENST00000498020 M0R2N4 97 aa6.09□□□□□ -1.44
HLA-DMB-262ENST00000498020 DLEU1O43261 78 aa6.09□□□□□ -1.44
HLA-DMB-262ENST00000498020 ZNF80P51504 273 aaPredicted RBP6.09□□□□□ -1.44
HLA-DMB-262ENST00000498020 CRIP2P52943 208 aaPredicted RBP6.09□□□□□ -1.44
HLA-DMB-262ENST00000498020 C9JAW5 83 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 INAFM2P0DMQ5 153 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 HLA-DRB4P13762 266 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 SMIM2Q9BVW6 85 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 HLA-DRB4X5D2U9 266 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 C2orf70A6NJV1 201 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 IGLC6P0CF74 106 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 RPL32P62910 135 aaKnown RBP6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 UNQ9165/PRO28630Q6UXU0 137 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 C10orf99Q6UWK7 81 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 SPANXA1Q9NS26 97 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 TRBV12-3P01733 135 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 INSL3P51460 131 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 GAGE6Q13070 117 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 NDUFA12Q9UI09 145 aa6.08□□□□□ -1.44
HLA-DMB-262ENST00000498020 TACC2O95359 2948 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 H3BMM0 161 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 LGALS9BQ3B8N2 356 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 LGALS9CQ6DKI2 356 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 COX8CQ7Z4L0 72 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 GPHB5Q86YW7 130 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 TRBV20-1A0A075B6N2 111 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 U3KQE9 123 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 F8VRH5 84 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 ANGP03950 147 aaKnown RBP6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 FOXI2Q6ZQN5 318 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 LINC00173Q6ZV60 143 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 MSRB1Q9NZV6 116 aa6.07□□□□□ -1.44
HLA-DMB-262ENST00000498020 IGLV2-18A0A075B6J9 118 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 SOCS3O14543 225 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 UBE2V1Q13404 147 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 RHOHQ15669 191 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 SPATA25Q9BR10 227 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 IGHV3-38A0A0C4DH36 116 aa6.06□□□□□ -1.44
HLA-DMB-262ENST00000498020 GAGE2AQ6NT46 116 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms