RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 GAGE5Q13069 117 aa7.13□□□□□ -1.27
PTPRN-218ENST00000497977 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
PTPRN-218ENST00000497977 MRPL54Q6P161 138 aaKnown RBP7.13□□□□□ -1.27
PTPRN-218ENST00000497977 C14orf178Q8N769 122 aaPredicted RBP7.13□□□□□ -1.27
PTPRN-218ENST00000497977 ANAPC16Q96DE5 110 aa7.13□□□□□ -1.27
PTPRN-218ENST00000497977 RPS10P5Q9NQ39 176 aa7.13□□□□□ -1.27
PTPRN-218ENST00000497977 NAT8BQ9UHF3 227 aa7.13□□□□□ -1.27
PTPRN-218ENST00000497977 ALMS1Q8TCU4 4167 aa7.13□□□□□ -1.27
PTPRN-218ENST00000497977 RTL8CO15255 209 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 RHEBQ15382 184 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 C10orf91Q5T1B1 145 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 SVBPQ8N300 66 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 NUP35Q8NFH5 326 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 DNAJC30Q96LL9 226 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 GFRA4Q9GZZ7 299 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 TNFRSF18Q9Y5U5 241 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 COX11Q9Y6N1 276 aa7.12□□□□□ -1.27
PTPRN-218ENST00000497977 A0A087WX48 190 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 A0A1B0GUT8 65 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 SMIM27A0A1W2PRY6 76 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 C7orf77A4D0Y5 90 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 SNAPINO95295 136 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 NTF3P20783 257 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 LINC01556Q5JQF7 62 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 UFSP1Q6NVU6 142 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
PTPRN-218ENST00000497977 FRZBQ92765 325 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 TM2D2Q9BX73 214 aa7.11□□□□□ -1.27
PTPRN-218ENST00000497977 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
PTPRN-218ENST00000497977 TRAV8-3A0A0A6YYJ7 113 aa7.1□□□□□ -1.27
PTPRN-218ENST00000497977 FAM231BA6NCW3 169 aa7.1□□□□□ -1.27
PTPRN-218ENST00000497977 PSCAO43653 123 aa7.1□□□□□ -1.27
PTPRN-218ENST00000497977 CAMPP49913 170 aa7.1□□□□□ -1.27
PTPRN-218ENST00000497977 CHCHD7Q9BUK0 85 aa7.1□□□□□ -1.27
PTPRN-218ENST00000497977 DPH3P1Q9H4G8 78 aa7.1□□□□□ -1.27
PTPRN-218ENST00000497977 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
PTPRN-218ENST00000497977 TMEM262E9PQX1 116 aa7.09□□□□□ -1.27
PTPRN-218ENST00000497977 S100PP25815 95 aa7.09□□□□□ -1.27
PTPRN-218ENST00000497977 FOXA3P55318 350 aaPredicted RBP7.09□□□□□ -1.27
PTPRN-218ENST00000497977 RIGQ13278 110 aa7.09□□□□□ -1.27
PTPRN-218ENST00000497977 Q6ZSN1 163 aa7.09□□□□□ -1.27
PTPRN-218ENST00000497977 RMI2Q96E14 147 aa7.09□□□□□ -1.27
PTPRN-218ENST00000497977 CNFNQ9BYD5 112 aa7.09□□□□□ -1.27
PTPRN-218ENST00000497977 CTDSP1Q9GZU7 261 aa7.09□□□□□ -1.27
PTPRN-218ENST00000497977 FRAS1Q86XX4 4008 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 TRAV26-2A0A0B4J265 109 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 IBA57-AS1B1ANH7 110 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 LINC00315P59091 139 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 HBBP68871 147 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 LAGE3Q14657 143 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 SUMO4Q6EEV6 95 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 ATRAIDQ6UW56 229 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 WFDC10BQ8IUB3 73 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 VPS13DQ5THJ4 4388 aa7.08□□□□□ -1.28
PTPRN-218ENST00000497977 NCR2O95944 276 aa7.07□□□□□ -1.28
PTPRN-218ENST00000497977 UBE2D3P61077 147 aa7.07□□□□□ -1.28
PTPRN-218ENST00000497977 UBE2D2P62837 147 aa7.07□□□□□ -1.28
PTPRN-218ENST00000497977 NIT2Q9NQR4 276 aa7.07□□□□□ -1.28
PTPRN-218ENST00000497977 TRBV6-8A0A0A6YYG3 113 aa7.06□□□□□ -1.28
PTPRN-218ENST00000497977 TNP2Q05952 138 aa7.06□□□□□ -1.28
PTPRN-218ENST00000497977 Q0VG73 95 aa7.06□□□□□ -1.28
PTPRN-218ENST00000497977 RASL11AQ6T310 242 aa7.06□□□□□ -1.28
PTPRN-218ENST00000497977 CBLN2Q8IUK8 224 aa7.06□□□□□ -1.28
PTPRN-218ENST00000497977 AMN1Q8IY45 258 aa7.06□□□□□ -1.28
PTPRN-218ENST00000497977 TRBV25-1A0A075B6N4 114 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 A0A1B0GXF2 115 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 SMKR1H3BMG3 65 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 ATP6V1G1O75348 118 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 PPP1R17O96001 155 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 IGHV3-30P01768 117 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 IGHV3-33P01772 117 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 S100A8P05109 93 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 IGHV3-30-3P0DP02 117 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 IGHV3-30-5P0DP03 117 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 ATP5L2Q7Z4Y8 100 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 BTF3L4Q96K17 158 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 CHCHD5Q9BSY4 110 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 KIF25-AS1Q9Y6Z4 181 aa7.05□□□□□ -1.28
PTPRN-218ENST00000497977 TGIF2-C20orf24A0A0A6YYL0 155 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 A0A1B0GVY2 172 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 A0A1B0GW15 77 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 C16orf90A8MZG2 172 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 M0QY20 66 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 RPL39LQ96EH5 51 aaKnown RBP7.04□□□□□ -1.28
PTPRN-218ENST00000497977 IMMP2LQ96T52 175 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 TMEM191AQ9H0A3 160 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 Q9UF83 564 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 KMT2AQ03164 3969 aa7.04□□□□□ -1.28
PTPRN-218ENST00000497977 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
PTPRN-218ENST00000497977 UBE2L6O14933 153 aa7.03□□□□□ -1.28
PTPRN-218ENST00000497977 SCO1O75880 301 aa7.03□□□□□ -1.28
PTPRN-218ENST00000497977 LINC00694P0DN24 101 aa7.03□□□□□ -1.28
PTPRN-218ENST00000497977 CDPF1Q6NVV7 123 aa7.03□□□□□ -1.28
PTPRN-218ENST00000497977 DEFB104AQ8WTQ1 72 aa7.03□□□□□ -1.28
PTPRN-218ENST00000497977 KRTAP1-5Q9BYS1 174 aa7.03□□□□□ -1.28
PTPRN-218ENST00000497977 GAS8-AS1O95177 125 aa7.02□□□□□ -1.29
PTPRN-218ENST00000497977 CRPP02741 224 aa7.02□□□□□ -1.29
PTPRN-218ENST00000497977 SMAGPQ0VAQ4 97 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms