RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 DUX3Q96PT4 197 aa12.06□□□□□ -0.48
PCBP4-216ENST00000497390 KIR2DL4Q99706 377 aa12.06□□□□□ -0.48
PCBP4-216ENST00000497390 LGALS9O00182 355 aa12.05□□□□□ -0.48
PCBP4-216ENST00000497390 VCYO14598 125 aa12.05□□□□□ -0.48
PCBP4-216ENST00000497390 PRB1P04280 392 aa12.05□□□□□ -0.48
PCBP4-216ENST00000497390 PRO0461Q9UI25 63 aa12.05□□□□□ -0.48
PCBP4-216ENST00000497390 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
PCBP4-216ENST00000497390 KNCNA6PVL3 124 aa12.05□□□□□ -0.48
PCBP4-216ENST00000497390 HOXA3O43365 443 aaPredicted RBP12.05□□□□□ -0.48
PCBP4-216ENST00000497390 A0A0J9YY99 117 aa12.04□□□□□ -0.48
PCBP4-216ENST00000497390 BEX4Q9NWD9 120 aaPredicted RBP12.04□□□□□ -0.48
PCBP4-216ENST00000497390 CR1P17927 2039 aa12.04□□□□□ -0.48
PCBP4-216ENST00000497390 HOXD3P31249 432 aaPredicted RBP12.03□□□□□ -0.48
PCBP4-216ENST00000497390 ZNF876PQ49A33 203 aa12.03□□□□□ -0.48
PCBP4-216ENST00000497390 MRPL16Q9NX20 251 aaKnown RBP12.03□□□□□ -0.48
PCBP4-216ENST00000497390 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
PCBP4-216ENST00000497390 A0A096LNT2 108 aa12.03□□□□□ -0.48
PCBP4-216ENST00000497390 PPP1R17O96001 155 aa12.03□□□□□ -0.48
PCBP4-216ENST00000497390 AMELXQ99217 191 aa12.03□□□□□ -0.48
PCBP4-216ENST00000497390 SNRPD3P62318 126 aaKnown RBP12.02□□□□□ -0.48
PCBP4-216ENST00000497390 TSPAN13O95857 204 aa12.02□□□□□ -0.49
PCBP4-216ENST00000497390 SLURP1P55000 103 aa12.02□□□□□ -0.49
PCBP4-216ENST00000497390 CEMP1Q6PRD7 247 aaPredicted RBP12.02□□□□□ -0.49
PCBP4-216ENST00000497390 LINC01619G3V211 115 aa12.01□□□□□ -0.49
PCBP4-216ENST00000497390 RNASE13Q5GAN3 156 aaKnown RBP12.01□□□□□ -0.49
PCBP4-216ENST00000497390 SPAG8Q99932 426 aaPredicted RBP12.01□□□□□ -0.49
PCBP4-216ENST00000497390 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
PCBP4-216ENST00000497390 UBE2D1P51668 147 aa12.01□□□□□ -0.49
PCBP4-216ENST00000497390 RPL32P62910 135 aaKnown RBP12.01□□□□□ -0.49
PCBP4-216ENST00000497390 GTSF1LQ9H1H1 148 aa12.01□□□□□ -0.49
PCBP4-216ENST00000497390 TSSC4Q9Y5U2 329 aaPredicted RBP12.01□□□□□ -0.49
PCBP4-216ENST00000497390 APCP25054 2843 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 GAGE13Q4V321 117 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 TIMM17AQ99595 171 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 JMJD1CQ15652 2540 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 CCDC168Q8NDH2 2452 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 LOC107984156A0A0G2JMH3 177 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 F8W1H4 67 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 ARL17AQ8IVW1 177 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 ZNF702PQ9H963 129 aa12□□□□□ -0.49
PCBP4-216ENST00000497390 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
PCBP4-216ENST00000497390 RBMY1BA6NDE4 496 aaKnown RBP11.99□□□□□ -0.49
PCBP4-216ENST00000497390 RBMY1EA6NEQ0 496 aaKnown RBP11.99□□□□□ -0.49
PCBP4-216ENST00000497390 EIF4EBP3O60516 100 aaPredicted RBP11.99□□□□□ -0.49
PCBP4-216ENST00000497390 RBMY1DP0C7P1 496 aaKnown RBP11.99□□□□□ -0.49
PCBP4-216ENST00000497390 KRTAP10-9P60411 292 aa11.99□□□□□ -0.49
PCBP4-216ENST00000497390 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
PCBP4-216ENST00000497390 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
PCBP4-216ENST00000497390 FAM104AQ969W3 186 aa11.99□□□□□ -0.49
PCBP4-216ENST00000497390 PTH2Q96A98 100 aa11.99□□□□□ -0.49
PCBP4-216ENST00000497390 C2CD3Q4AC94 2353 aa11.99□□□□□ -0.49
PCBP4-216ENST00000497390 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
PCBP4-216ENST00000497390 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
PCBP4-216ENST00000497390 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
PCBP4-216ENST00000497390 UBR5O95071 2799 aaPredicted RBP11.98□□□□□ -0.49
PCBP4-216ENST00000497390 ADARB2-AS1A8MUL3 147 aa11.98□□□□□ -0.49
PCBP4-216ENST00000497390 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
PCBP4-216ENST00000497390 CFC1P0CG37 223 aa11.98□□□□□ -0.49
PCBP4-216ENST00000497390 Q6ZSN1 163 aa11.98□□□□□ -0.49
PCBP4-216ENST00000497390 TMEM141Q96I45 108 aa11.98□□□□□ -0.49
PCBP4-216ENST00000497390 J3QQQ9 107 aa11.97□□□□□ -0.49
PCBP4-216ENST00000497390 PSMB2P49721 201 aa11.97□□□□□ -0.49
PCBP4-216ENST00000497390 DEFB131AP59861 70 aa11.97□□□□□ -0.49
PCBP4-216ENST00000497390 NDUFA11Q86Y39 141 aa11.97□□□□□ -0.49
PCBP4-216ENST00000497390 C20orf203Q8NBC4 194 aa11.97□□□□□ -0.49
PCBP4-216ENST00000497390 TMEM238C9JI98 176 aa11.96□□□□□ -0.49
PCBP4-216ENST00000497390 SYT8Q8NBV8 401 aa11.96□□□□□ -0.49
PCBP4-216ENST00000497390 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.49
PCBP4-216ENST00000497390 VPREB3Q9UKI3 123 aa11.96□□□□□ -0.49
PCBP4-216ENST00000497390 ITPR3Q14573 2671 aa11.96□□□□□ -0.5
PCBP4-216ENST00000497390 HERVK_113P61574 105 aa11.96□□□□□ -0.5
PCBP4-216ENST00000497390 NSUN5P1Q3KNT7 163 aa11.96□□□□□ -0.5
PCBP4-216ENST00000497390 ODF3Q96PU9 254 aa11.96□□□□□ -0.5
PCBP4-216ENST00000497390 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
PCBP4-216ENST00000497390 ZNF22P17026 224 aaPredicted RBP11.95□□□□□ -0.5
PCBP4-216ENST00000497390 TRPT1Q86TN4 253 aaKnown RBP11.95□□□□□ -0.5
PCBP4-216ENST00000497390 NFE4Q86UQ8 179 aa11.95□□□□□ -0.5
PCBP4-216ENST00000497390 SLC25A29Q8N8R3 303 aa11.95□□□□□ -0.5
PCBP4-216ENST00000497390 SETXQ7Z333 2677 aaKnown RBP11.95□□□□□ -0.5
PCBP4-216ENST00000497390 AZU1P20160 251 aa11.95□□□□□ -0.5
PCBP4-216ENST00000497390 SMAGPQ0VAQ4 97 aa11.95□□□□□ -0.5
PCBP4-216ENST00000497390 TMEM223A0PJW6 202 aa11.94□□□□□ -0.5
PCBP4-216ENST00000497390 A8MZ25 164 aa11.94□□□□□ -0.5
PCBP4-216ENST00000497390 GATA3P23771 443 aa11.94□□□□□ -0.5
PCBP4-216ENST00000497390 CFAP126Q5VTH2 177 aa11.94□□□□□ -0.5
PCBP4-216ENST00000497390 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
PCBP4-216ENST00000497390 GAGE12HA6NDE8 117 aa11.93□□□□□ -0.5
PCBP4-216ENST00000497390 I3L3M4 83 aa11.93□□□□□ -0.5
PCBP4-216ENST00000497390 TCL1BO95988 128 aa11.93□□□□□ -0.5
PCBP4-216ENST00000497390 TMEM61Q8N0U2 210 aa11.93□□□□□ -0.5
PCBP4-216ENST00000497390 LGALS3P17931 250 aaKnown RBP11.92□□□□□ -0.5
PCBP4-216ENST00000497390 UBE2D3P61077 147 aa11.92□□□□□ -0.5
PCBP4-216ENST00000497390 UBE2D2P62837 147 aa11.92□□□□□ -0.5
PCBP4-216ENST00000497390 PAPPA-AS1Q5QFB9 102 aa11.92□□□□□ -0.5
PCBP4-216ENST00000497390 Q6YL49 198 aa11.92□□□□□ -0.5
PCBP4-216ENST00000497390 C10orf126Q8N4M7 172 aa11.92□□□□□ -0.5
PCBP4-216ENST00000497390 RAX2Q96IS3 184 aa11.92□□□□□ -0.5
PCBP4-216ENST00000497390 SPXQ9BT56 116 aa11.92□□□□□ -0.5
PCBP4-216ENST00000497390 IGHV3-38A0A0C4DH36 116 aa11.92□□□□□ -0.5
PCBP4-216ENST00000497390 TMEM238LA0A1B0GVL6 79 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms