RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 APOC4-APOC2K7ER74 178 aa0.19□□□□□ -2.38
PHC3-216ENST00000497171 TPRP12270 2363 aaKnown RBP0.19□□□□□ -2.38
PHC3-216ENST00000497171 DAPK1P53355 1430 aa0.19□□□□□ -2.38
PHC3-216ENST00000497171 ADGRB1O14514 1584 aa0.19□□□□□ -2.38
PHC3-216ENST00000497171 INSL4Q14641 139 aa0.18□□□□□ -2.38
PHC3-216ENST00000497171 UBE2DNLQ8IWF7 75 aa0.18□□□□□ -2.38
PHC3-216ENST00000497171 TMEM191AQ9H0A3 160 aa0.18□□□□□ -2.38
PHC3-216ENST00000497171 AKAP11Q9UKA4 1901 aa0.18□□□□□ -2.38
PHC3-216ENST00000497171 LAMB1P07942 1786 aa0.17□□□□□ -2.38
PHC3-216ENST00000497171 LINC00312Q9Y6C7 94 aa0.17□□□□□ -2.38
PHC3-216ENST00000497171 SPEF2Q9C093 1822 aa0.17□□□□□ -2.38
PHC3-216ENST00000497171 CACNA1HO95180 2353 aa0.16□□□□□ -2.38
PHC3-216ENST00000497171 TRBV10-3A0A0K0K1G6 114 aa0.16□□□□□ -2.38
PHC3-216ENST00000497171 ARPC4P59998 168 aa0.16□□□□□ -2.38
PHC3-216ENST00000497171 ZNF818PQ6ZRF7 136 aa0.16□□□□□ -2.38
PHC3-216ENST00000497171 SDF2Q99470 211 aa0.16□□□□□ -2.38
PHC3-216ENST00000497171 WFDC6Q9BQY6 131 aa0.16□□□□□ -2.38
PHC3-216ENST00000497171 PDCD10Q9BUL8 212 aa0.16□□□□□ -2.38
PHC3-216ENST00000497171 CCDC167Q9P0B6 97 aa0.16□□□□□ -2.38
PHC3-216ENST00000497171 CLPSL1A2RUU4 121 aa0.15□□□□□ -2.39
PHC3-216ENST00000497171 IFITM1P13164 125 aa0.15□□□□□ -2.39
PHC3-216ENST00000497171 HIST1H1DP16402 221 aaKnown RBP0.15□□□□□ -2.39
PHC3-216ENST00000497171 NPVFQ9HCQ7 196 aa0.15□□□□□ -2.39
PHC3-216ENST00000497171 ABCA12Q86UK0 2595 aa0.15□□□□□ -2.39
PHC3-216ENST00000497171 GOLGA3Q08378 1498 aa0.15□□□□□ -2.39
PHC3-216ENST00000497171 DOCK11Q5JSL3 2073 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 ZNF815PA8K554 130 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 FAM25AB3EWG3 89 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 FAM25CB3EWG5 89 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 FAM25GB3EWG6 89 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 CCDC58Q4VC31 144 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 SSBP3-AS1Q7Z2R9 100 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 DPH3Q96FX2 82 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 MYO7AQ13402 2215 aa0.14□□□□□ -2.39
PHC3-216ENST00000497171 PTPRZ1P23471 2315 aaPredicted RBP0.13□□□□□ -2.39
PHC3-216ENST00000497171 ZFYVE26Q68DK2 2539 aa0.13□□□□□ -2.39
PHC3-216ENST00000497171 PIGBOS1A0A0B4J2F0 54 aa0.13□□□□□ -2.39
PHC3-216ENST00000497171 CCL8P80075 99 aa0.13□□□□□ -2.39
PHC3-216ENST00000497171 BAGE3Q86Y29 109 aa0.13□□□□□ -2.39
PHC3-216ENST00000497171 COPS9Q8WXC6 57 aa0.13□□□□□ -2.39
PHC3-216ENST00000497171 PAIP2BQ9ULR5 123 aaKnown RBP0.13□□□□□ -2.39
PHC3-216ENST00000497171 PIEZO1Q92508 2521 aa0.13□□□□□ -2.39
PHC3-216ENST00000497171 SYNE2Q8WXH0 6885 aaKnown RBP0.13□□□□□ -2.39
PHC3-216ENST00000497171 MYOM3Q5VTT5 1437 aa0.13□□□□□ -2.39
PHC3-216ENST00000497171 CASKIN1Q8WXD9 1431 aa0.13□□□□□ -2.39
PHC3-216ENST00000497171 SIPA1L3O60292 1781 aaPredicted RBP0.12□□□□□ -2.39
PHC3-216ENST00000497171 ZNF518AQ6AHZ1 1483 aa0.12□□□□□ -2.39
PHC3-216ENST00000497171 CADP27708 2225 aa0.12□□□□□ -2.39
PHC3-216ENST00000497171 KIAA0100Q14667 2235 aaKnown RBP0.12□□□□□ -2.39
PHC3-216ENST00000497171 G3V318 75 aa0.12□□□□□ -2.39
PHC3-216ENST00000497171 RBM3P98179 157 aaKnown RBP0.12□□□□□ -2.39
PHC3-216ENST00000497171 AQP10Q96PS8 301 aa0.12□□□□□ -2.39
PHC3-216ENST00000497171 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
PHC3-216ENST00000497171 FAM107BQ9H098 131 aa0.12□□□□□ -2.39
PHC3-216ENST00000497171 U3KQA8 63 aa0.12□□□□□ -2.39
PHC3-216ENST00000497171 IGF2RP11717 2491 aa0.12□□□□□ -2.39
PHC3-216ENST00000497171 NWD2Q9ULI1 1742 aa0.11□□□□□ -2.39
PHC3-216ENST00000497171 HCG22E2RYF7 251 aa0.11□□□□□ -2.39
PHC3-216ENST00000497171 PPP1R17O96001 155 aa0.11□□□□□ -2.39
PHC3-216ENST00000497171 CFDP00746 253 aaPredicted RBP0.11□□□□□ -2.39
PHC3-216ENST00000497171 CFAP126Q5VTH2 177 aa0.11□□□□□ -2.39
PHC3-216ENST00000497171 ARL11Q969Q4 196 aa0.11□□□□□ -2.39
PHC3-216ENST00000497171 TSC22D3Q99576 134 aa0.11□□□□□ -2.39
PHC3-216ENST00000497171 OTOGQ6ZRI0 2925 aa0.11□□□□□ -2.39
PHC3-216ENST00000497171 ZMYM4Q5VZL5 1548 aa0.11□□□□□ -2.39
PHC3-216ENST00000497171 POLQO75417 2590 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 GRIN2AQ12879 1464 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 IFT140Q96RY7 1462 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 IFT172Q9UG01 1749 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 LRRC37A3O60309 1634 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 TRAV13-2A0A0B4J235 113 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 GNG7O60262 68 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 C10orf128Q5T292 105 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 R4GMQ9 66 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 BICRAQ9NZM4 1560 aa0.1□□□□□ -2.39
PHC3-216ENST00000497171 NSD1Q96L73 2696 aaPredicted RBP0.09□□□□□ -2.39
PHC3-216ENST00000497171 A0A0D9SFI3 127 aa0.09□□□□□ -2.4
PHC3-216ENST00000497171 PIN1P1O15428 100 aa0.09□□□□□ -2.4
PHC3-216ENST00000497171 SIX6O95475 246 aa0.09□□□□□ -2.4
PHC3-216ENST00000497171 AGPAT4-IT1Q9H0P7 198 aa0.09□□□□□ -2.4
PHC3-216ENST00000497171 SCN3BQ9NY72 215 aa0.09□□□□□ -2.4
PHC3-216ENST00000497171 PRO0255Q9UI72 69 aa0.09□□□□□ -2.4
PHC3-216ENST00000497171 CELSR2Q9HCU4 2923 aa0.08□□□□□ -2.4
PHC3-216ENST00000497171 SPINK8P0C7L1 97 aa0.08□□□□□ -2.4
PHC3-216ENST00000497171 CCL18P55774 89 aa0.08□□□□□ -2.4
PHC3-216ENST00000497171 SELENOWP63302 87 aa0.08□□□□□ -2.4
PHC3-216ENST00000497171 TTC9CQ8N5M4 171 aa0.08□□□□□ -2.4
PHC3-216ENST00000497171 MYH8P13535 1937 aa0.08□□□□□ -2.4
PHC3-216ENST00000497171 NCOR2Q9Y618 2525 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 CTXND1A0A1B0GTU2 59 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 S100A12P80511 92 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 MEIG1Q5JSS6 88 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 Q5VV11 94 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 C12orf73Q69YU5 71 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 LINC00470Q9BZP3 86 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 RERGLQ9H628 205 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 FSIP2Q5CZC0 6907 aa0.07□□□□□ -2.4
PHC3-216ENST00000497171 MACF1Q9UPN3 7388 aaKnown RBP0.07□□□□□ -2.4
PHC3-216ENST00000497171 MYH9P35579 1960 aaKnown RBP0.06□□□□□ -2.4
PHC3-216ENST00000497171 ZNF609O15014 1411 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms