RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 TRAV8-3A0A0A6YYJ7 113 aa9.68□□□□□ -0.86
VEGFA-215ENST00000497139 C20orf203Q8NBC4 194 aa9.68□□□□□ -0.86
VEGFA-215ENST00000497139 C20orf173Q96LM9 149 aa9.68□□□□□ -0.86
VEGFA-215ENST00000497139 IGHV1-58A0A0C4DH39 117 aa9.67□□□□□ -0.86
VEGFA-215ENST00000497139 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
VEGFA-215ENST00000497139 URB1O60287 2271 aaKnown RBP9.67□□□□□ -0.86
VEGFA-215ENST00000497139 A0A0J9YXV3 536 aa9.67□□□□□ -0.86
VEGFA-215ENST00000497139 GNRH2O43555 120 aa9.67□□□□□ -0.86
VEGFA-215ENST00000497139 SPRY2O43597 315 aa9.67□□□□□ -0.86
VEGFA-215ENST00000497139 VMO1Q7Z5L0 202 aa9.67□□□□□ -0.86
VEGFA-215ENST00000497139 PYGO1Q9Y3Y4 419 aa9.67□□□□□ -0.86
VEGFA-215ENST00000497139 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 B9A039 149 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 FAM222AQ5U5X8 452 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 CLEC19AQ6UXS0 136 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 IGHV3-64A0A075B6Q5 118 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 F5H697 171 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 TRACP01848 142 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 INAFM2P0DMQ5 153 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 DEFB109BQ30KR1 87 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 MINOS1Q5TGZ0 78 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 MINOS1-NBL1R4GNA1 71 aa9.66□□□□□ -0.86
VEGFA-215ENST00000497139 COX7A2LO14548 114 aa9.65□□□□□ -0.86
VEGFA-215ENST00000497139 DSPP15924 2871 aaKnown RBP9.65□□□□□ -0.86
VEGFA-215ENST00000497139 IGHV3OR16-13A0A075B7E8 117 aa9.65□□□□□ -0.86
VEGFA-215ENST00000497139 IGHV3-74A0A0B4J1X5 117 aa9.65□□□□□ -0.86
VEGFA-215ENST00000497139 SOCS3O14543 225 aa9.65□□□□□ -0.86
VEGFA-215ENST00000497139 ADAMTSL4-AS1Q5T5F5 129 aa9.65□□□□□ -0.86
VEGFA-215ENST00000497139 Q8N9W7 124 aa9.64□□□□□ -0.87
VEGFA-215ENST00000497139 E7EQL1 145 aa9.64□□□□□ -0.87
VEGFA-215ENST00000497139 M0QY20 66 aa9.63□□□□□ -0.87
VEGFA-215ENST00000497139 IGFL3Q6UXB1 125 aa9.63□□□□□ -0.87
VEGFA-215ENST00000497139 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
VEGFA-215ENST00000497139 VSIG2Q96IQ7 327 aa9.63□□□□□ -0.87
VEGFA-215ENST00000497139 OPRPNQ99935 248 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-215ENST00000497139 EDA2RQ9HAV5 297 aa9.63□□□□□ -0.87
VEGFA-215ENST00000497139 KLK5Q9Y337 293 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-215ENST00000497139 ASPMQ8IZT6 3477 aa9.63□□□□□ -0.87
VEGFA-215ENST00000497139 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
VEGFA-215ENST00000497139 KLLNB2CW77 178 aa9.62□□□□□ -0.87
VEGFA-215ENST00000497139 ZZEF1O43149 2961 aa9.62□□□□□ -0.87
VEGFA-215ENST00000497139 TINCRA0A1B0GVN0 87 aa9.62□□□□□ -0.87
VEGFA-215ENST00000497139 ECSCRQ19T08 205 aa9.62□□□□□ -0.87
VEGFA-215ENST00000497139 ZNF580Q9UK33 172 aa9.62□□□□□ -0.87
VEGFA-215ENST00000497139 A0A087WWL8 130 aa9.61□□□□□ -0.87
VEGFA-215ENST00000497139 RPL18AQ02543 176 aaKnown RBP9.61□□□□□ -0.87
VEGFA-215ENST00000497139 DAZ2Q13117 558 aaKnown RBP9.61□□□□□ -0.87
VEGFA-215ENST00000497139 DAZ4Q86SG3 579 aaKnown RBP9.61□□□□□ -0.87
VEGFA-215ENST00000497139 DPH3Q96FX2 82 aa9.61□□□□□ -0.87
VEGFA-215ENST00000497139 DAZ1Q9NQZ3 744 aaKnown RBP9.61□□□□□ -0.87
VEGFA-215ENST00000497139 DAZ3Q9NR90 486 aaKnown RBP9.61□□□□□ -0.87
VEGFA-215ENST00000497139 MUC4Q99102 2169 aa9.61□□□□□ -0.87
VEGFA-215ENST00000497139 ADARB2-AS1A8MUL3 147 aa9.6□□□□□ -0.87
VEGFA-215ENST00000497139 ATP6V0E1O15342 81 aa9.6□□□□□ -0.87
VEGFA-215ENST00000497139 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
VEGFA-215ENST00000497139 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
VEGFA-215ENST00000497139 JPT2Q9H910 190 aa9.6□□□□□ -0.87
VEGFA-215ENST00000497139 ARHGAP32A7KAX9 2087 aa9.6□□□□□ -0.87
VEGFA-215ENST00000497139 ZNF415Q09FC8 603 aa9.6□□□□□ -0.87
VEGFA-215ENST00000497139 CIRBPQ14011 172 aaKnown RBP9.6□□□□□ -0.87
VEGFA-215ENST00000497139 FAM223BA6NKX1 122 aa9.59□□□□□ -0.87
VEGFA-215ENST00000497139 CD28P10747 220 aa9.59□□□□□ -0.87
VEGFA-215ENST00000497139 RPL11P62913 178 aaKnown RBP9.59□□□□□ -0.87
VEGFA-215ENST00000497139 BEAN1Q3B7T3 259 aa9.59□□□□□ -0.87
VEGFA-215ENST00000497139 Q6ZSV7 163 aa9.59□□□□□ -0.87
VEGFA-215ENST00000497139 FAM223AQ8IWN6 122 aa9.59□□□□□ -0.87
VEGFA-215ENST00000497139 SERP2Q8N6R1 65 aa9.59□□□□□ -0.87
VEGFA-215ENST00000497139 hADV29S1A0JD25 119 aa9.59□□□□□ -0.87
VEGFA-215ENST00000497139 MRAPQ8TCY5 172 aa9.59□□□□□ -0.87
VEGFA-215ENST00000497139 NDUFA1O15239 70 aa9.58□□□□□ -0.88
VEGFA-215ENST00000497139 LYNX1G3V0Z9 82 aa9.58□□□□□ -0.88
VEGFA-215ENST00000497139 NDUFA4O00483 81 aa9.58□□□□□ -0.88
VEGFA-215ENST00000497139 LYNX1P0DP58 116 aa9.58□□□□□ -0.88
VEGFA-215ENST00000497139 TIRAPP58753 221 aa9.58□□□□□ -0.88
VEGFA-215ENST00000497139 DEFB104AQ8WTQ1 72 aa9.58□□□□□ -0.88
VEGFA-215ENST00000497139 TRAV41A0A0B4J266 112 aa9.57□□□□□ -0.88
VEGFA-215ENST00000497139 BAALC-AS2P0C853 105 aa9.57□□□□□ -0.88
VEGFA-215ENST00000497139 PF4V1P10720 104 aa9.57□□□□□ -0.88
VEGFA-215ENST00000497139 PRRC2CQ9Y520 2896 aaKnown RBP9.57□□□□□ -0.88
VEGFA-215ENST00000497139 FAM74A4Q5TZK3 123 aa9.56□□□□□ -0.88
VEGFA-215ENST00000497139 Q6JHZ5 121 aa9.56□□□□□ -0.88
VEGFA-215ENST00000497139 CFAP47Q6ZTR5 3102 aa9.56□□□□□ -0.88
VEGFA-215ENST00000497139 PRRC2AP48634 2157 aaKnown RBP9.56□□□□□ -0.88
VEGFA-215ENST00000497139 UPK3BQ9BT76 320 aa9.56□□□□□ -0.88
VEGFA-215ENST00000497139 IGHV3-16A0A0C4DH30 117 aa9.55□□□□□ -0.88
VEGFA-215ENST00000497139 OVOL2Q9BRP0 275 aa9.55□□□□□ -0.88
VEGFA-215ENST00000497139 IGHV3OR16-10A0A075B7F0 116 aa9.55□□□□□ -0.88
VEGFA-215ENST00000497139 NBL1P41271 181 aa9.55□□□□□ -0.88
VEGFA-215ENST00000497139 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
VEGFA-215ENST00000497139 LOC400499M0QZD8 3231 aa9.55□□□□□ -0.88
VEGFA-215ENST00000497139 DCHS1Q96JQ0 3298 aa9.55□□□□□ -0.88
VEGFA-215ENST00000497139 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
VEGFA-215ENST00000497139 NPC2P61916 151 aa9.54□□□□□ -0.88
VEGFA-215ENST00000497139 LINC00308Q8TCZ7 52 aa9.54□□□□□ -0.88
VEGFA-215ENST00000497139 AKAP13Q12802 2813 aa9.54□□□□□ -0.88
VEGFA-215ENST00000497139 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
VEGFA-215ENST00000497139 F5H768 121 aa9.53□□□□□ -0.88
VEGFA-215ENST00000497139 G3V318 75 aa9.53□□□□□ -0.88
VEGFA-215ENST00000497139 IGLV5-45A0A087WSX0 123 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms