RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 GNG2P59768 71 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 LGALSLQ3ZCW2 172 aaPredicted RBP2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 IGFL3Q6UXB1 125 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 RPS19BP1Q86WX3 136 aaKnown RBP2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 LINC00311Q8N616 119 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 OR5D14Q8NGL3 314 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 DIRC1Q969H9 104 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 MAGOHBQ96A72 148 aaKnown RBP2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 OR4C12Q96R67 309 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 PKMYT1Q99640 499 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 PSMG3Q9BT73 122 aaPredicted RBP2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 BOKQ9UMX3 212 aaPredicted RBP2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 CCL26Q9Y258 94 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 S4R3C0 116 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 LRP1BQ9NZR2 4599 aa2.2□□□□□ -2.06
EXOSC3-208ENST00000496910 FAT3Q8TDW7 4589 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 IGHV3OR16-8A0A075B7F1 116 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 A0A1B0GU33 70 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 OR2T8A6NH00 312 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 H3BPC8 53 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 CCDC179H3BU77 68 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 CCL25O15444 150 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 MT-ND6P03923 174 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 CLPSP04118 112 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 IL4P05112 153 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 HLA-DRB4P13762 266 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 PPP3R1P63098 170 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 PLGLB1Q02325 96 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 KHDC3LQ587J8 217 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 MEIG1Q5JSS6 88 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 Q6P435 159 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 LYZL1Q6UWQ5 148 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 SH2D6Q7Z4S9 175 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 RNF182Q8N6D2 247 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 APCDD1LQ8NCL9 501 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 OR10AC1Q8NH08 325 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 DEDD2Q8WXF8 326 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 PP6455Q8WZ26 134 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 AQP3Q92482 292 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 TMEM191AQ9H0A3 160 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 COMMD3Q9UBI1 195 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 ZFP30Q9Y2G7 519 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 FAM215AQ9Y5M1 114 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 SOX21Q9Y651 276 aaPredicted RBP2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 HLA-DRB4X5D2U9 266 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 ARFGEF3Q5TH69 2177 aa2.19□□□□□ -2.06
EXOSC3-208ENST00000496910 KMT2DO14686 5537 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TRAV7A0A075B6U4 112 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 C11orf86A6NJI1 115 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 UQCRQO14949 82 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 CREBL2O60519 120 aaPredicted RBP2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TCL1BO95988 128 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TRGC1P0CF51 173 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 AKAIN1P0CW23 69 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 COL8A2P25067 703 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 SNRPD3P62318 126 aaKnown RBP2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 EIF4EBP1Q13541 118 aaPredicted RBP2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 EBI3Q14213 229 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TMEM155Q4W5P6 130 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 LINC00483Q53H64 154 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 ZNF880Q6PDB4 577 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TEX261Q6UWH6 196 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 LCN15Q6UWW0 184 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TMEM91Q6ZNR0 172 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TEN1Q86WV5 123 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 OR5D16Q8NGK9 328 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 MRPS24Q96EL2 167 aaKnown RBP2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TXNL4BQ9NX01 149 aaKnown RBP2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 DNAJC15Q9Y5T4 150 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 MINOS1-NBL1R4GNA1 71 aa2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
EXOSC3-208ENST00000496910 TRGV5A0A0B4J1U4 118 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 A0A0G2JMM0 328 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 A0A1W2PPB8 328 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 C7orf71A4D174 169 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 TMEM235A6NFC5 223 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 KIR3DP1A8MWS1 328 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 GNRH2O43555 120 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 HBDP02042 147 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 GUCA1AP43080 201 aaPredicted RBP2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 CDK5R1Q15078 307 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 FAM27BQ5VT28 67 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 IZUMO2Q6UXV1 221 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 DPH3Q96FX2 82 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 BCL2L10Q9HD36 194 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 FKBP11Q9NYL4 201 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 PLIN4Q96Q06 1357 aa2.17□□□□□ -2.06
EXOSC3-208ENST00000496910 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 A0A0D9SG52 128 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 A0A1B0GVG6 124 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 C7orf66A4D0T2 115 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 B4DSR2 109 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 H7C2G1 150 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 TIMM17BO60830 172 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 SNAPC5O75971 98 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 LY6G6CO95867 125 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms