RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 CD24P25063 80 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 CNTFRP26992 372 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 UQCRFS1P47985 274 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 FXYD2P54710 66 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 LOXL1Q08397 574 aaPredicted RBP2.44□□□□□ -2.02
TRIM4-205ENST00000496896 KLRD1Q13241 179 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 RRN3P1Q2M238 152 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 C12orf74Q32Q52 190 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 PCP2Q8IVA1 136 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 APRG1Q8IVJ8 170 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 C20orf203Q8NBC4 194 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 TMEM158Q8WZ71 300 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 EEF1AKMT3Q96AZ1 226 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 TMEM141Q96I45 108 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 HIST1H4GQ99525 98 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 FOXC2Q99958 501 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 DPH3P1Q9H4G8 78 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 SPANXB1Q9NS25 103 aaPredicted RBP2.44□□□□□ -2.02
TRIM4-205ENST00000496896 NHP2Q9NX24 153 aaKnown RBP2.44□□□□□ -2.02
TRIM4-205ENST00000496896 CYSLTR1Q9Y271 337 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 CADP27708 2225 aa2.44□□□□□ -2.02
TRIM4-205ENST00000496896 ZDBF2Q9HCK1 2354 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 TRBV7-3A0A075B6L6 115 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 IGKV2-28A0A075B6P5 120 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 IGKV2-40A0A087WW87 121 aaPredicted RBP2.43□□□□□ -2.02
TRIM4-205ENST00000496896 IGHV3-21A0A0B4J1V1 117 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 IGHV7-4-1A0A0J9YVY3 117 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 IGKV2D-40P01614 121 aaPredicted RBP2.43□□□□□ -2.02
TRIM4-205ENST00000496896 IGKV2D-28P01615 120 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 IGHG4P01861 327 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 COX7A1P24310 79 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 ASIPP42127 132 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 UBE2D1P51668 147 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 UBE2E1P51965 193 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 CRYBA4P53673 196 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 SMAGPQ0VAQ4 97 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 SCGB2A2Q13296 93 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 HES1Q14469 280 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 SPANXN1Q5VSR9 72 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 CLEC2AQ6UVW9 174 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 VMO1Q7Z5L0 202 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 DEFB123Q8N688 67 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 DEFB124Q8NES8 71 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 OR10J6PQ8NGY7 276 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 RAB37Q96AX2 223 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 USMG5Q96IX5 58 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 LINC01600Q96MT4 127 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 ODF3Q96PU9 254 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 SCGB3A1Q96QR1 104 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 TIMM17AQ99595 171 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 MRPL16Q9NX20 251 aaKnown RBP2.43□□□□□ -2.02
TRIM4-205ENST00000496896 MRPL35Q9NZE8 188 aaKnown RBP2.43□□□□□ -2.02
TRIM4-205ENST00000496896 TIMM8BQ9Y5J9 83 aaPredicted RBP2.43□□□□□ -2.02
TRIM4-205ENST00000496896 HILPDAQ9Y5L2 63 aa2.43□□□□□ -2.02
TRIM4-205ENST00000496896 LAMA1P25391 3075 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 WDR87Q6ZQQ6 2873 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 ARFGEF3Q5TH69 2177 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 TMSB15BA0A087X1C1 80 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 IGKV2D-26A0A0A0MRZ7 120 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.42□□□□□ -2.02
TRIM4-205ENST00000496896 TRAV40A0A0B4J280 105 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 TRBV6-5A0A0K0K1A5 114 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 C11orf86A6NJI1 115 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 NDUFA4O00483 81 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 APOMO95445 188 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 IGHV1-69P01742 117 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 HLA-DMBP28068 263 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 ZNF80P51504 273 aaPredicted RBP2.42□□□□□ -2.02
TRIM4-205ENST00000496896 UBE2D3P61077 147 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 UBE2D2P62837 147 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 ERCC8Q13216 396 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 RHOHQ15669 191 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 CFAP126Q5VTH2 177 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 LHFPL4Q7Z7J7 247 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 TEN1Q86WV5 123 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 SBSPONQ8IVN8 264 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 DYNAPQ8N1N2 210 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 PPDPFLQ8WWR9 84 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 ITLN2Q8WWU7 325 aaPredicted RBP2.42□□□□□ -2.02
TRIM4-205ENST00000496896 C18orf15Q96N68 181 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 AGPAT4-IT1Q9H0P7 198 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 PPDPFQ9H3Y8 114 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 PHLDA3Q9Y5J5 127 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 ZGRF1Q86YA3 2104 aa2.42□□□□□ -2.02
TRIM4-205ENST00000496896 USP34Q70CQ2 3546 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 A0A0B4J2C4 111 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 A0A0J9YX75 114 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 SPAARA0A1B0GVQ0 90 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 SDHAF1A6NFY7 115 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 A8MWV9 139 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 SMKR1H3BMG3 65 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 K7EMT4 169 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 LGALS1P09382 135 aaKnown RBP2.41□□□□□ -2.02
TRIM4-205ENST00000496896 APELAP0DMC3 54 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 P0DMU3 169 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 FAM231AP0DMU4 169 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 FAM231CP0DMU5 169 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 COX6B1P14854 86 aa2.41□□□□□ -2.02
TRIM4-205ENST00000496896 S100A4P26447 101 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms