RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 HERC1Q15751 4861 aa9.78□□□□□ -0.84
CXCL12-208ENST00000496375 F2Z2F3 143 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 K7EQD1 137 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 M0R381 172 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 EREGO14944 169 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 SRIP30626 198 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 RHOHQ15669 191 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 WDR73Q6P4I2 378 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 NFE4Q86UQ8 179 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 SLC25A29Q8N8R3 303 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 FER1L6-AS1Q8NA97 138 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 IMMP2LQ96T52 175 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 SAMD10Q9BYL1 202 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 JPT2Q9H910 190 aa9.77□□□□□ -0.85
CXCL12-208ENST00000496375 GZMBP10144 247 aa9.76□□□□□ -0.85
CXCL12-208ENST00000496375 GYPEP15421 78 aa9.76□□□□□ -0.85
CXCL12-208ENST00000496375 OSTCQ9NRP0 149 aa9.76□□□□□ -0.85
CXCL12-208ENST00000496375 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
CXCL12-208ENST00000496375 TRAV9-2A0A087WT02 112 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 C5orf52A6NGY3 159 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 FOXA3P55318 350 aaPredicted RBP9.75□□□□□ -0.85
CXCL12-208ENST00000496375 TIRAPP58753 221 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 CACNG7P62955 275 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 SPANXN1Q5VSR9 72 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 KCNIP4Q6PIL6 250 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 WFDC10BQ8IUB3 73 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 KIF25-AS1Q9Y6Z4 181 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 URGCP-MRPS24S4R325 110 aa9.75□□□□□ -0.85
CXCL12-208ENST00000496375 TGIF2-C20orf24A0A0A6YYL0 155 aa9.74□□□□□ -0.85
CXCL12-208ENST00000496375 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
CXCL12-208ENST00000496375 GATCO43716 136 aaKnown RBP9.74□□□□□ -0.85
CXCL12-208ENST00000496375 DNAH10OSP0CZ25 163 aa9.74□□□□□ -0.85
CXCL12-208ENST00000496375 CDPF1Q6NVV7 123 aa9.74□□□□□ -0.85
CXCL12-208ENST00000496375 Q6ZSN1 163 aa9.74□□□□□ -0.85
CXCL12-208ENST00000496375 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
CXCL12-208ENST00000496375 DNAH8Q96JB1 4490 aa9.74□□□□□ -0.85
CXCL12-208ENST00000496375 A0A087WTM6 91 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 IGHV3-73A0A0B4J1V6 119 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 A8MWL6 223 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 EVI2AP22794 236 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 SNRPEP62304 92 aaKnown RBP9.73□□□□□ -0.85
CXCL12-208ENST00000496375 LYZL1Q6UWQ5 148 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 AP1S3Q96PC3 154 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 MSRB1Q9NZV6 116 aa9.73□□□□□ -0.85
CXCL12-208ENST00000496375 A0A087WWL8 130 aa9.72□□□□□ -0.85
CXCL12-208ENST00000496375 LOC100131303A0A0U1RQF7 123 aa9.72□□□□□ -0.85
CXCL12-208ENST00000496375 EPM2AB3EWF7 344 aa9.72□□□□□ -0.85
CXCL12-208ENST00000496375 K7EP13 123 aa9.72□□□□□ -0.85
CXCL12-208ENST00000496375 V9GYV3 84 aa9.72□□□□□ -0.85
CXCL12-208ENST00000496375 TRAV9-1A0A075B6T8 112 aa9.71□□□□□ -0.86
CXCL12-208ENST00000496375 TRBV10-1A0A0K0K1A3 114 aa9.71□□□□□ -0.86
CXCL12-208ENST00000496375 S100A8P05109 93 aa9.71□□□□□ -0.86
CXCL12-208ENST00000496375 AKR1D1P51857 326 aa9.71□□□□□ -0.86
CXCL12-208ENST00000496375 RAB4BP61018 213 aa9.71□□□□□ -0.86
CXCL12-208ENST00000496375 FAM74A4Q5TZK3 123 aa9.71□□□□□ -0.86
CXCL12-208ENST00000496375 OR10G8Q8NGN5 311 aa9.71□□□□□ -0.86
CXCL12-208ENST00000496375 TSKUQ8WUA8 353 aa9.71□□□□□ -0.86
CXCL12-208ENST00000496375 MUC21A0A0G2JKD1 596 aa9.7□□□□□ -0.86
CXCL12-208ENST00000496375 MUC21A0A140T8X8 626 aa9.7□□□□□ -0.86
CXCL12-208ENST00000496375 XGP55808 180 aa9.7□□□□□ -0.86
CXCL12-208ENST00000496375 LINC00518Q8N0U6 118 aa9.7□□□□□ -0.86
CXCL12-208ENST00000496375 C14orf178Q8N769 122 aaPredicted RBP9.7□□□□□ -0.86
CXCL12-208ENST00000496375 TPPP3Q9BW30 176 aa9.7□□□□□ -0.86
CXCL12-208ENST00000496375 TRGC2P03986 189 aa9.69□□□□□ -0.86
CXCL12-208ENST00000496375 TRGC1P0CF51 173 aa9.69□□□□□ -0.86
CXCL12-208ENST00000496375 NTF3P20783 257 aa9.69□□□□□ -0.86
CXCL12-208ENST00000496375 KRTAP10-1P60331 282 aa9.69□□□□□ -0.86
CXCL12-208ENST00000496375 FABP9Q0Z7S8 132 aa9.69□□□□□ -0.86
CXCL12-208ENST00000496375 C10orf126Q8N4M7 172 aa9.69□□□□□ -0.86
CXCL12-208ENST00000496375 Q9UF83 564 aa9.68□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BKO60814 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BJP06899 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BOP23527 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BBP33778 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 NDUFA6P56556 154 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BDP58876 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BCP62807 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST2H2BEQ16778 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.67□□□□□ -0.86
CXCL12-208ENST00000496375 ATP6V0E2Q8NHE4 81 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BHQ93079 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BNQ99877 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 HIST1H2BMQ99879 126 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 DPH3P1Q9H4G8 78 aa9.67□□□□□ -0.86
CXCL12-208ENST00000496375 IGHV3-38A0A0C4DH36 116 aa9.66□□□□□ -0.86
CXCL12-208ENST00000496375 SMIM27A0A1W2PRY6 76 aa9.66□□□□□ -0.86
CXCL12-208ENST00000496375 HIGD1CA8MV81 97 aa9.66□□□□□ -0.86
CXCL12-208ENST00000496375 ZNF56Q15929 161 aa9.66□□□□□ -0.86
CXCL12-208ENST00000496375 GTSF1LQ9H1H1 148 aa9.66□□□□□ -0.86
CXCL12-208ENST00000496375 MYCBP2O75592 4640 aa9.66□□□□□ -0.86
CXCL12-208ENST00000496375 TRBV7-3A0A075B6L6 115 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 GAGE12JA6NER3 117 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 M0QY20 66 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 PHOX2AO14813 284 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 PSCAO43653 123 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms