RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 GAGE6Q13070 117 aa7.72□□□□□ -1.17
SHROOM1-206ENST00000495680 C9orf163Q8N9P6 203 aa7.72□□□□□ -1.17
SHROOM1-206ENST00000495680 PRR34Q9NV39 138 aa7.72□□□□□ -1.17
SHROOM1-206ENST00000495680 PAGE4O60829 102 aa7.71□□□□□ -1.18
SHROOM1-206ENST00000495680 RBX1P62877 108 aa7.71□□□□□ -1.18
SHROOM1-206ENST00000495680 MIAQ16674 131 aa7.71□□□□□ -1.18
SHROOM1-206ENST00000495680 SDIM1Q6ZPB5 146 aa7.71□□□□□ -1.18
SHROOM1-206ENST00000495680 LINC00269Q8N2A0 174 aa7.71□□□□□ -1.18
SHROOM1-206ENST00000495680 SCO2A0A1W2PP80 73 aa7.7□□□□□ -1.18
SHROOM1-206ENST00000495680 SNAI2O43623 268 aa7.7□□□□□ -1.18
SHROOM1-206ENST00000495680 DGAT2L7PQ6IED9 249 aa7.7□□□□□ -1.18
SHROOM1-206ENST00000495680 STOML3Q8TAV4 291 aa7.7□□□□□ -1.18
SHROOM1-206ENST00000495680 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
SHROOM1-206ENST00000495680 ZNF471Q9BX82 626 aaPredicted RBP7.7□□□□□ -1.18
SHROOM1-206ENST00000495680 KIF25-AS1Q9Y6Z4 181 aa7.7□□□□□ -1.18
SHROOM1-206ENST00000495680 IGLV10-54A0A075B6I4 117 aa7.69□□□□□ -1.18
SHROOM1-206ENST00000495680 A0A1B0GV50 99 aa7.69□□□□□ -1.18
SHROOM1-206ENST00000495680 F5H697 171 aa7.69□□□□□ -1.18
SHROOM1-206ENST00000495680 DERL1Q9BUN8 251 aa7.69□□□□□ -1.18
SHROOM1-206ENST00000495680 MLST8Q9BVC4 326 aa7.69□□□□□ -1.18
SHROOM1-206ENST00000495680 VAX2Q9UIW0 290 aa7.69□□□□□ -1.18
SHROOM1-206ENST00000495680 ARPC5O15511 151 aa7.68□□□□□ -1.18
SHROOM1-206ENST00000495680 SLPIP03973 132 aa7.68□□□□□ -1.18
SHROOM1-206ENST00000495680 CXCL1P09341 107 aa7.68□□□□□ -1.18
SHROOM1-206ENST00000495680 CHTF8P0CG12 524 aa7.68□□□□□ -1.18
SHROOM1-206ENST00000495680 SPANXN1Q5VSR9 72 aa7.68□□□□□ -1.18
SHROOM1-206ENST00000495680 TCEAL7Q9BRU2 100 aa7.68□□□□□ -1.18
SHROOM1-206ENST00000495680 GFRA4Q9GZZ7 299 aa7.68□□□□□ -1.18
SHROOM1-206ENST00000495680 TNXBP22105 4242 aa7.68□□□□□ -1.18
SHROOM1-206ENST00000495680 SMLR1H3BR10 107 aa7.67□□□□□ -1.18
SHROOM1-206ENST00000495680 OR5AL1P0C617 328 aa7.67□□□□□ -1.18
SHROOM1-206ENST00000495680 BAGE2Q86Y30 109 aa7.67□□□□□ -1.18
SHROOM1-206ENST00000495680 C20orf203Q8NBC4 194 aa7.67□□□□□ -1.18
SHROOM1-206ENST00000495680 TRBV25-1A0A075B6N4 114 aa7.66□□□□□ -1.18
SHROOM1-206ENST00000495680 GZMBP10144 247 aa7.66□□□□□ -1.18
SHROOM1-206ENST00000495680 PKIAP61925 76 aa7.66□□□□□ -1.18
SHROOM1-206ENST00000495680 REG3AQ06141 175 aa7.66□□□□□ -1.18
SHROOM1-206ENST00000495680 CIRBPQ14011 172 aaKnown RBP7.66□□□□□ -1.18
SHROOM1-206ENST00000495680 IQCJQ1A5X6 159 aa7.66□□□□□ -1.18
SHROOM1-206ENST00000495680 SFT2D1Q8WV19 159 aa7.66□□□□□ -1.18
SHROOM1-206ENST00000495680 IGLV4-60A0A075B6I1 120 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 hDV102S1A0JD36 115 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 M0QY20 66 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 MGPP08493 103 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 RAB5CP51148 216 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 CNBPP62633 177 aaKnown RBP7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 LRP2P98164 4655 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 TMEM97Q5BJF2 176 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 SUMO4Q6EEV6 95 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 FAM213BQ8TBF2 198 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 MBD3L1Q8WWY6 194 aa7.65□□□□□ -1.18
SHROOM1-206ENST00000495680 A0A087WYN8 130 aa7.64□□□□□ -1.19
SHROOM1-206ENST00000495680 IGHV1-24A0A0C4DH33 117 aa7.64□□□□□ -1.19
SHROOM1-206ENST00000495680 S100A9P06702 114 aaKnown RBP7.64□□□□□ -1.19
SHROOM1-206ENST00000495680 AP1S3Q96PC3 154 aa7.64□□□□□ -1.19
SHROOM1-206ENST00000495680 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
SHROOM1-206ENST00000495680 RPL35P42766 123 aaKnown RBP7.63□□□□□ -1.19
SHROOM1-206ENST00000495680 NKX2-5P52952 324 aaPredicted RBP7.63□□□□□ -1.19
SHROOM1-206ENST00000495680 ODF1Q14990 250 aa7.63□□□□□ -1.19
SHROOM1-206ENST00000495680 Q6ZRU5 148 aa7.63□□□□□ -1.19
SHROOM1-206ENST00000495680 TMUB2Q71RG4 321 aa7.63□□□□□ -1.19
SHROOM1-206ENST00000495680 CLRN3Q8NCR9 226 aa7.63□□□□□ -1.19
SHROOM1-206ENST00000495680 TPPP3Q9BW30 176 aa7.63□□□□□ -1.19
SHROOM1-206ENST00000495680 A0A0D9SG52 128 aa7.62□□□□□ -1.19
SHROOM1-206ENST00000495680 PFDN1O60925 122 aa7.62□□□□□ -1.19
SHROOM1-206ENST00000495680 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
SHROOM1-206ENST00000495680 SPACA4Q8TDM5 124 aa7.62□□□□□ -1.19
SHROOM1-206ENST00000495680 IGHV3-64A0A075B6Q5 118 aa7.61□□□□□ -1.19
SHROOM1-206ENST00000495680 CCL20P78556 96 aa7.61□□□□□ -1.19
SHROOM1-206ENST00000495680 KCNRGQ8N5I3 272 aa7.61□□□□□ -1.19
SHROOM1-206ENST00000495680 FER1L6-AS1Q8NA97 138 aa7.61□□□□□ -1.19
SHROOM1-206ENST00000495680 TMEM243Q9BU79 118 aa7.61□□□□□ -1.19
SHROOM1-206ENST00000495680 TRAV8-4A0A0B4J246 113 aa7.6□□□□□ -1.19
SHROOM1-206ENST00000495680 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
SHROOM1-206ENST00000495680 PHOX2AO14813 284 aa7.6□□□□□ -1.19
SHROOM1-206ENST00000495680 P01737 135 aa7.6□□□□□ -1.19
SHROOM1-206ENST00000495680 CENPWQ5EE01 88 aa7.6□□□□□ -1.19
SHROOM1-206ENST00000495680 C15orf56Q8N910 161 aa7.6□□□□□ -1.19
SHROOM1-206ENST00000495680 OR2D3Q8NGH3 330 aa7.6□□□□□ -1.19
SHROOM1-206ENST00000495680 DPH3Q96FX2 82 aa7.6□□□□□ -1.19
SHROOM1-206ENST00000495680 RAB19A4D1S5 217 aa7.59□□□□□ -1.19
SHROOM1-206ENST00000495680 UMAD1C9J7I0 102 aa7.59□□□□□ -1.19
SHROOM1-206ENST00000495680 H2AFB1P0C5Y9 115 aa7.59□□□□□ -1.19
SHROOM1-206ENST00000495680 RASL11AQ6T310 242 aa7.59□□□□□ -1.19
SHROOM1-206ENST00000495680 C11orf52Q96A22 123 aa7.59□□□□□ -1.19
SHROOM1-206ENST00000495680 AP5S1Q9NUS5 200 aa7.59□□□□□ -1.19
SHROOM1-206ENST00000495680 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
SHROOM1-206ENST00000495680 IGKV3OR2-268A0A0C4DH90 116 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 C19orf71A6NCJ1 209 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 GAGE12HA6NDE8 117 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 H7C1H1 209 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 COX6A2Q02221 97 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 ZNF345Q14585 488 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 HIGD2BQ4VC39 106 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 RNF185Q96GF1 192 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 GNG13Q9P2W3 67 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 RNF213Q63HN8 5207 aa7.58□□□□□ -1.2
SHROOM1-206ENST00000495680 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.57□□□□□ -1.2
SHROOM1-206ENST00000495680 SULT1A2P50226 295 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms