RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 CUL7Q14999 1698 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 JMJD1CQ15652 2540 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 A6NIN4 97 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 IFNA17P01571 189 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 AKAIN1P0CW23 69 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 CCL8P80075 99 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 INSL4Q14641 139 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 Q56UQ5 140 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 RPL7L1Q6DKI1 246 aaKnown RBP0.72□□□□□ -2.29
COPS3-211ENST00000495640 PPP1R1CQ8WVI7 109 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 SMG6Q86US8 1419 aaKnown RBP0.72□□□□□ -2.29
COPS3-211ENST00000495640 KDM6BO15054 1643 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 TRBV10-3A0A0K0K1G6 114 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 RBAKDNA6NC62 111 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 ZNF137PP52743 207 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 ZNF818PQ6ZRF7 136 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 C4orf33Q8N1A6 199 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 DSCR8Q96T75 97 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 TNS1Q9HBL0 1735 aaKnown RBP0.71□□□□□ -2.3
COPS3-211ENST00000495640 NOTCH1P46531 2555 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 CASKIN1Q8WXD9 1431 aa0.71□□□□□ -2.3
COPS3-211ENST00000495640 MEGF8Q7Z7M0 2845 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 ARAP2Q8WZ64 1704 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 ROBO1Q9Y6N7 1651 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 TRBV7-1A0A0A6YYK4 115 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 HCG22E2RYF7 251 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 CORTO00230 105 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 IFNGP01579 166 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 RBM3P98179 157 aaKnown RBP0.7□□□□□ -2.3
COPS3-211ENST00000495640 C6orf52Q5T4I8 152 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 C12orf73Q69YU5 71 aa0.7□□□□□ -2.3
COPS3-211ENST00000495640 EIF4G3O43432 1585 aaKnown RBP0.7□□□□□ -2.3
COPS3-211ENST00000495640 MYO7AQ13402 2215 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 FRAS1Q86XX4 4008 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 OOSP1A8MZH6 123 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 F6UZH7 168 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 SIX6O95475 246 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 TNFP01375 233 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 PI4KAP42356 2102 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 EDDM3BP56851 147 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 FXYD6P3P58550 94 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 TMEM203Q969S6 136 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 C10orf95Q9H7T3 257 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 LINC00312Q9Y6C7 94 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 V9GYV3 84 aa0.69□□□□□ -2.3
COPS3-211ENST00000495640 RIMS1Q86UR5 1692 aaKnown RBP0.69□□□□□ -2.3
COPS3-211ENST00000495640 DOCK2Q92608 1830 aa0.68□□□□□ -2.3
COPS3-211ENST00000495640 MYOM2P54296 1465 aa0.68□□□□□ -2.3
COPS3-211ENST00000495640 SSC5DA1L4H1 1573 aa0.68□□□□□ -2.3
COPS3-211ENST00000495640 MIF4GDA9UHW6 222 aaKnown RBP0.68□□□□□ -2.3
COPS3-211ENST00000495640 APOC4-APOC2K7ER74 178 aa0.68□□□□□ -2.3
COPS3-211ENST00000495640 APOC2P02655 101 aa0.68□□□□□ -2.3
COPS3-211ENST00000495640 CATR1Q13166 79 aa0.68□□□□□ -2.3
COPS3-211ENST00000495640 FAM74A4Q5TZK3 123 aa0.68□□□□□ -2.3
COPS3-211ENST00000495640 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
COPS3-211ENST00000495640 FAM103A1Q9BTL3 118 aaKnown RBP0.68□□□□□ -2.3
COPS3-211ENST00000495640 APCP25054 2843 aa0.67□□□□□ -2.3
COPS3-211ENST00000495640 TRAV13-2A0A0B4J235 113 aa0.67□□□□□ -2.3
COPS3-211ENST00000495640 IER3IP1Q9Y5U9 82 aa0.67□□□□□ -2.3
COPS3-211ENST00000495640 LRRC37A3O60309 1634 aa0.67□□□□□ -2.3
COPS3-211ENST00000495640 SHROOM2Q13796 1616 aa0.67□□□□□ -2.3
COPS3-211ENST00000495640 PRDM2Q13029 1718 aa0.67□□□□□ -2.3
COPS3-211ENST00000495640 CADP27708 2225 aa0.66□□□□□ -2.3
COPS3-211ENST00000495640 GVQW2A0A096LPI5 108 aaPredicted RBP0.66□□□□□ -2.3
COPS3-211ENST00000495640 WFDC6Q9BQY6 131 aa0.66□□□□□ -2.3
COPS3-211ENST00000495640 GNG8Q9UK08 70 aa0.66□□□□□ -2.3
COPS3-211ENST00000495640 PXDNQ92626 1479 aa0.66□□□□□ -2.3
COPS3-211ENST00000495640 CPSF1Q10570 1443 aaKnown RBP0.65□□□□□ -2.3
COPS3-211ENST00000495640 CDK13Q14004 1512 aaKnown RBP0.65□□□□□ -2.31
COPS3-211ENST00000495640 FAM135AQ9P2D6 1515 aa0.65□□□□□ -2.31
COPS3-211ENST00000495640 TRGV1A0A0A0MS02 117 aa0.65□□□□□ -2.31
COPS3-211ENST00000495640 GNG4P50150 75 aa0.65□□□□□ -2.31
COPS3-211ENST00000495640 MRPL54Q6P161 138 aaKnown RBP0.65□□□□□ -2.31
COPS3-211ENST00000495640 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.65□□□□□ -2.31
COPS3-211ENST00000495640 PPP3R2Q96LZ3 170 aa0.65□□□□□ -2.31
COPS3-211ENST00000495640 SPANXDQ9BXN6 97 aa0.65□□□□□ -2.31
COPS3-211ENST00000495640 CACNA1HO95180 2353 aa0.64□□□□□ -2.31
COPS3-211ENST00000495640 SNAPC5O75971 98 aa0.64□□□□□ -2.31
COPS3-211ENST00000495640 TPPP2P59282 170 aa0.64□□□□□ -2.31
COPS3-211ENST00000495640 C8orf59Q8N0T1 100 aaPredicted RBP0.64□□□□□ -2.31
COPS3-211ENST00000495640 CGREF1Q99674 301 aa0.64□□□□□ -2.31
COPS3-211ENST00000495640 BPESC1Q9GZL8 116 aa0.64□□□□□ -2.31
COPS3-211ENST00000495640 KTN1Q86UP2 1357 aaKnown RBP0.64□□□□□ -2.31
COPS3-211ENST00000495640 PSME4Q14997 1843 aa0.64□□□□□ -2.31
COPS3-211ENST00000495640 ZMYM4Q5VZL5 1548 aa0.64□□□□□ -2.31
COPS3-211ENST00000495640 PZPP20742 1482 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 PIGBOS1A0A0B4J2F0 54 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 S100A1P23297 94 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 PPP3R1P63098 170 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 C9orf153Q5TBE3 101 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 C5orf38Q86SI9 138 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 SMIM11BQ8TCY0 68 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 ANK2Q01484 3957 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 IFT172Q9UG01 1749 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 PPIP5K1Q6PFW1 1433 aa0.63□□□□□ -2.31
COPS3-211ENST00000495640 ACYP2P14621 99 aa0.62□□□□□ -2.31
COPS3-211ENST00000495640 VMO1Q7Z5L0 202 aa0.62□□□□□ -2.31
COPS3-211ENST00000495640 DPH3P1Q9H4G8 78 aa0.62□□□□□ -2.31
COPS3-211ENST00000495640 LINC00474Q9P2X8 69 aa0.62□□□□□ -2.31
COPS3-211ENST00000495640 BDP1A6H8Y1 2624 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms