RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 RBFOX3A6NFN3 312 aa11.74□□□□□ -0.53
YIPF4-204ENST00000495355 IGLV2-8P01709 118 aa11.74□□□□□ -0.53
YIPF4-204ENST00000495355 H2AFB1P0C5Y9 115 aa11.74□□□□□ -0.53
YIPF4-204ENST00000495355 RPL35P42766 123 aaKnown RBP11.74□□□□□ -0.53
YIPF4-204ENST00000495355 TMUB2Q71RG4 321 aa11.74□□□□□ -0.53
YIPF4-204ENST00000495355 FAT3Q8TDW7 4589 aa11.74□□□□□ -0.53
YIPF4-204ENST00000495355 A0A0D9SG52 128 aa11.73□□□□□ -0.53
YIPF4-204ENST00000495355 PFDN1O60925 122 aa11.73□□□□□ -0.53
YIPF4-204ENST00000495355 ELOBQ15370 118 aa11.73□□□□□ -0.53
YIPF4-204ENST00000495355 C15orf54Q8N8G6 183 aa11.73□□□□□ -0.53
YIPF4-204ENST00000495355 C11orf52Q96A22 123 aa11.73□□□□□ -0.53
YIPF4-204ENST00000495355 VAX2Q9UIW0 290 aa11.73□□□□□ -0.53
YIPF4-204ENST00000495355 SSTP61278 116 aa11.72□□□□□ -0.53
YIPF4-204ENST00000495355 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
YIPF4-204ENST00000495355 CIRBP-AS1Q8TBR5 109 aa11.72□□□□□ -0.53
YIPF4-204ENST00000495355 CHAC1Q9BUX1 264 aa11.72□□□□□ -0.53
YIPF4-204ENST00000495355 KANTRA0A1W2PQU2 76 aa11.71□□□□□ -0.53
YIPF4-204ENST00000495355 TMEM262E9PQX1 116 aa11.71□□□□□ -0.53
YIPF4-204ENST00000495355 PLA2G1BP04054 148 aaKnown RBP11.71□□□□□ -0.53
YIPF4-204ENST00000495355 IGLC6P0CF74 106 aa11.71□□□□□ -0.53
YIPF4-204ENST00000495355 GZMBP10144 247 aa11.71□□□□□ -0.53
YIPF4-204ENST00000495355 Q0VG73 95 aa11.71□□□□□ -0.53
YIPF4-204ENST00000495355 SPANXN1Q5VSR9 72 aa11.71□□□□□ -0.53
YIPF4-204ENST00000495355 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.54
YIPF4-204ENST00000495355 C1orf43Q9BWL3 253 aa11.7□□□□□ -0.54
YIPF4-204ENST00000495355 C19orf71A6NCJ1 209 aa11.69□□□□□ -0.54
YIPF4-204ENST00000495355 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
YIPF4-204ENST00000495355 PRR34Q9NV39 138 aa11.69□□□□□ -0.54
YIPF4-204ENST00000495355 GNG13Q9P2W3 67 aa11.69□□□□□ -0.54
YIPF4-204ENST00000495355 TRAV1-1A0A0B4J248 108 aa11.68□□□□□ -0.54
YIPF4-204ENST00000495355 KRTAP29-1A8MX34 341 aaPredicted RBP11.68□□□□□ -0.54
YIPF4-204ENST00000495355 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
YIPF4-204ENST00000495355 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
YIPF4-204ENST00000495355 AP1S3Q96PC3 154 aa11.68□□□□□ -0.54
YIPF4-204ENST00000495355 CHCHD5Q9BSY4 110 aa11.68□□□□□ -0.54
YIPF4-204ENST00000495355 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
YIPF4-204ENST00000495355 RAB19A4D1S5 217 aa11.67□□□□□ -0.54
YIPF4-204ENST00000495355 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
YIPF4-204ENST00000495355 F5H697 171 aa11.67□□□□□ -0.54
YIPF4-204ENST00000495355 M0QY20 66 aa11.67□□□□□ -0.54
YIPF4-204ENST00000495355 RBX1P62877 108 aa11.67□□□□□ -0.54
YIPF4-204ENST00000495355 MANBALQ9NQG1 85 aa11.67□□□□□ -0.54
YIPF4-204ENST00000495355 CRPP02741 224 aa11.66□□□□□ -0.54
YIPF4-204ENST00000495355 PRSS1P07477 247 aa11.66□□□□□ -0.54
YIPF4-204ENST00000495355 GAGE6Q13070 117 aa11.66□□□□□ -0.54
YIPF4-204ENST00000495355 SUMO4Q6EEV6 95 aa11.66□□□□□ -0.54
YIPF4-204ENST00000495355 CLPSL2Q6UWE3 100 aa11.66□□□□□ -0.54
YIPF4-204ENST00000495355 HLA-DQA1P01909 254 aa11.65□□□□□ -0.54
YIPF4-204ENST00000495355 EIF5AP63241 154 aaKnown RBP11.65□□□□□ -0.54
YIPF4-204ENST00000495355 MIAQ16674 131 aa11.65□□□□□ -0.54
YIPF4-204ENST00000495355 IQCJQ1A5X6 159 aa11.65□□□□□ -0.54
YIPF4-204ENST00000495355 FER1L6-AS1Q8NA97 138 aa11.65□□□□□ -0.54
YIPF4-204ENST00000495355 OR2D3Q8NGH3 330 aa11.65□□□□□ -0.54
YIPF4-204ENST00000495355 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
YIPF4-204ENST00000495355 LINC00269Q8N2A0 174 aa11.64□□□□□ -0.55
YIPF4-204ENST00000495355 PANO1I0J062 215 aa11.63□□□□□ -0.55
YIPF4-204ENST00000495355 MGPP08493 103 aa11.63□□□□□ -0.55
YIPF4-204ENST00000495355 C14orf177Q52M58 125 aa11.63□□□□□ -0.55
YIPF4-204ENST00000495355 TMEM97Q5BJF2 176 aa11.63□□□□□ -0.55
YIPF4-204ENST00000495355 TPPP3Q9BW30 176 aa11.63□□□□□ -0.55
YIPF4-204ENST00000495355 GFRA4Q9GZZ7 299 aa11.63□□□□□ -0.55
YIPF4-204ENST00000495355 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
YIPF4-204ENST00000495355 SMIM17P0DL12 118 aa11.62□□□□□ -0.55
YIPF4-204ENST00000495355 SULT1A2P50226 295 aa11.62□□□□□ -0.55
YIPF4-204ENST00000495355 PKIAP61925 76 aa11.62□□□□□ -0.55
YIPF4-204ENST00000495355 C20orf203Q8NBC4 194 aa11.62□□□□□ -0.55
YIPF4-204ENST00000495355 HMCN2Q8NDA2 5059 aa11.61□□□□□ -0.55
YIPF4-204ENST00000495355 LOC100996750A0A140TA64 210 aa11.61□□□□□ -0.55
YIPF4-204ENST00000495355 RAB5CP51148 216 aa11.61□□□□□ -0.55
YIPF4-204ENST00000495355 MEF2BQ02080 365 aaPredicted RBP11.61□□□□□ -0.55
YIPF4-204ENST00000495355 SMIM12Q96EX1 92 aa11.61□□□□□ -0.55
YIPF4-204ENST00000495355 KRTAP4-6Q9BYQ5 205 aa11.61□□□□□ -0.55
YIPF4-204ENST00000495355 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.61□□□□□ -0.55
YIPF4-204ENST00000495355 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
YIPF4-204ENST00000495355 IGHV1-24A0A0C4DH33 117 aa11.6□□□□□ -0.55
YIPF4-204ENST00000495355 GNG4P50150 75 aa11.6□□□□□ -0.55
YIPF4-204ENST00000495355 HNRNPA3P51991 378 aaKnown RBP11.6□□□□□ -0.55
YIPF4-204ENST00000495355 NKX2-5P52952 324 aaPredicted RBP11.6□□□□□ -0.55
YIPF4-204ENST00000495355 RPS20P60866 119 aaKnown RBP11.6□□□□□ -0.55
YIPF4-204ENST00000495355 LYZL1Q6UWQ5 148 aa11.6□□□□□ -0.55
YIPF4-204ENST00000495355 C9orf163Q8N9P6 203 aa11.6□□□□□ -0.55
YIPF4-204ENST00000495355 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.6□□□□□ -0.55
YIPF4-204ENST00000495355 CACNG7P62955 275 aa11.59□□□□□ -0.55
YIPF4-204ENST00000495355 IGLV10-54A0A075B6I4 117 aa11.58□□□□□ -0.56
YIPF4-204ENST00000495355 BCL2P10415 239 aa11.58□□□□□ -0.56
YIPF4-204ENST00000495355 REG3AQ06141 175 aa11.58□□□□□ -0.56
YIPF4-204ENST00000495355 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
YIPF4-204ENST00000495355 RASL11AQ6T310 242 aa11.58□□□□□ -0.56
YIPF4-204ENST00000495355 DAZAP1Q96EP5 407 aaKnown RBP11.58□□□□□ -0.56
YIPF4-204ENST00000495355 PDE6DO43924 150 aa11.57□□□□□ -0.56
YIPF4-204ENST00000495355 P01737 135 aa11.57□□□□□ -0.56
YIPF4-204ENST00000495355 NTF3P20783 257 aa11.57□□□□□ -0.56
YIPF4-204ENST00000495355 CTRLP40313 264 aa11.57□□□□□ -0.56
YIPF4-204ENST00000495355 NUDT10Q8NFP7 164 aa11.57□□□□□ -0.56
YIPF4-204ENST00000495355 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
YIPF4-204ENST00000495355 MED9Q9NWA0 146 aa11.57□□□□□ -0.56
YIPF4-204ENST00000495355 F2Z2F3 143 aa11.56□□□□□ -0.56
YIPF4-204ENST00000495355 H7C1H1 209 aa11.56□□□□□ -0.56
YIPF4-204ENST00000495355 K7EN84 100 aa11.56□□□□□ -0.56
YIPF4-204ENST00000495355 SLPIP03973 132 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms