RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 E9PLD3 99 aa13.71□□□□□ -0.21
TSPAN4-212ENST00000494815 H3BVH4 76 aa13.71□□□□□ -0.21
TSPAN4-212ENST00000494815 TAL2Q16559 108 aa13.71□□□□□ -0.21
TSPAN4-212ENST00000494815 GEMIN7Q9H840 131 aaKnown RBP13.71□□□□□ -0.21
TSPAN4-212ENST00000494815 MRPL35Q9NZE8 188 aaKnown RBP13.71□□□□□ -0.21
TSPAN4-212ENST00000494815 A8MTW9 85 aa13.71□□□□□ -0.22
TSPAN4-212ENST00000494815 TSPAN13O95857 204 aa13.71□□□□□ -0.22
TSPAN4-212ENST00000494815 AMTNQ6UX39 209 aa13.71□□□□□ -0.22
TSPAN4-212ENST00000494815 PGPEP1Q9NXJ5 209 aa13.71□□□□□ -0.22
TSPAN4-212ENST00000494815 IGKV3-20P01619 116 aa13.7□□□□□ -0.22
TSPAN4-212ENST00000494815 S100A4P26447 101 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-212ENST00000494815 LAGE3Q14657 143 aa13.7□□□□□ -0.22
TSPAN4-212ENST00000494815 NDUFA11Q86Y39 141 aa13.7□□□□□ -0.22
TSPAN4-212ENST00000494815 ZNF256Q9Y2P7 627 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-212ENST00000494815 IGLL5B9A064 214 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 SPANXN1Q5VSR9 72 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 FAM159AQ6UWV7 190 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 NRACQ8N912 160 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 MAP6D1Q9H9H5 199 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 WNK1Q9H4A3 2382 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 A0A087WX48 190 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 TRAV12-3A0A0B4J271 114 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 MAPKAPK5-AS1Q8N8E1 139 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 C2CD3Q4AC94 2353 aa13.69□□□□□ -0.22
TSPAN4-212ENST00000494815 F8W1H4 67 aa13.68□□□□□ -0.22
TSPAN4-212ENST00000494815 KNCNA6PVL3 124 aa13.68□□□□□ -0.22
TSPAN4-212ENST00000494815 H3BMM0 161 aa13.68□□□□□ -0.22
TSPAN4-212ENST00000494815 SPINK13Q1W4C9 94 aa13.68□□□□□ -0.22
TSPAN4-212ENST00000494815 NSUN5P1Q3KNT7 163 aa13.68□□□□□ -0.22
TSPAN4-212ENST00000494815 PLNP26678 52 aa13.67□□□□□ -0.22
TSPAN4-212ENST00000494815 SHISA2Q6UWI4 295 aa13.67□□□□□ -0.22
TSPAN4-212ENST00000494815 CYSRT1A8MQ03 144 aa13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 PHLDA3Q9Y5J5 127 aa13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 AGRNO00468 2067 aa13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 TRAV12-2A0A075B6T6 113 aa13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 GNRH2O43555 120 aa13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 RNASE3P12724 160 aaKnown RBP13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 KRTAP10-3P60369 221 aa13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 C12orf74Q32Q52 190 aa13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 SPANXB1Q9NS25 103 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-212ENST00000494815 K7EMI3 77 aa13.65□□□□□ -0.22
TSPAN4-212ENST00000494815 TRAV26-2A0A0B4J265 109 aa13.65□□□□□ -0.22
TSPAN4-212ENST00000494815 MTURNQ8N3F0 131 aa13.65□□□□□ -0.22
TSPAN4-212ENST00000494815 TRAV12-1A0A0B4J245 112 aa13.64□□□□□ -0.23
TSPAN4-212ENST00000494815 CD7P09564 240 aa13.64□□□□□ -0.23
TSPAN4-212ENST00000494815 WFDC2Q14508 124 aa13.64□□□□□ -0.23
TSPAN4-212ENST00000494815 ODF3L2Q3SX64 289 aa13.64□□□□□ -0.23
TSPAN4-212ENST00000494815 HIST1H4GQ99525 98 aa13.64□□□□□ -0.23
TSPAN4-212ENST00000494815 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-212ENST00000494815 J3QR89 54 aa13.63□□□□□ -0.23
TSPAN4-212ENST00000494815 NXPH4O95158 308 aa13.63□□□□□ -0.23
TSPAN4-212ENST00000494815 TRBV7-3A0A075B6L6 115 aa13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 OR11H12B2RN74 326 aa13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 M0R381 172 aa13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 IGLV1-51P01701 117 aa13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 OR11H2Q8NH07 326 aa13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 F8VRH5 84 aa13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 H7C1H1 209 aa13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 MRPL16Q9NX20 251 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-212ENST00000494815 RBMY1BA6NDE4 496 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 RBMY1EA6NEQ0 496 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 RBMY1DP0C7P1 496 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 CMC4P56277 68 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 RRN3P1Q2M238 152 aa13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 SMIM2Q9BVW6 85 aa13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 F8P00451 2351 aa13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 A0A1B0GWB2 263 aa13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 H3BMG7 143 aa13.61□□□□□ -0.23
TSPAN4-212ENST00000494815 IGHV3-16A0A0C4DH30 117 aa13.6□□□□□ -0.23
TSPAN4-212ENST00000494815 SS18L2Q9UHA2 77 aa13.6□□□□□ -0.23
TSPAN4-212ENST00000494815 PF4P02776 101 aa13.59□□□□□ -0.23
TSPAN4-212ENST00000494815 Q8N1Y9 231 aa13.59□□□□□ -0.23
TSPAN4-212ENST00000494815 C9orf85Q96MD7 179 aa13.59□□□□□ -0.23
TSPAN4-212ENST00000494815 MYMXA0A1B0GTQ4 84 aa13.59□□□□□ -0.23
TSPAN4-212ENST00000494815 FAM110AQ9BQ89 295 aa13.59□□□□□ -0.23
TSPAN4-212ENST00000494815 DPH3P1Q9H4G8 78 aa13.59□□□□□ -0.23
TSPAN4-212ENST00000494815 TRGV11A0A075B6L2 103 aa13.58□□□□□ -0.24
TSPAN4-212ENST00000494815 GAGE13Q4V321 117 aa13.58□□□□□ -0.24
TSPAN4-212ENST00000494815 ORMDL2Q53FV1 153 aa13.58□□□□□ -0.24
TSPAN4-212ENST00000494815 LINC00482Q8N8I6 264 aa13.58□□□□□ -0.24
TSPAN4-212ENST00000494815 TOMM6Q96B49 74 aa13.58□□□□□ -0.24
TSPAN4-212ENST00000494815 PRO0461Q9UI25 63 aa13.58□□□□□ -0.24
TSPAN4-212ENST00000494815 SPRY2O43597 315 aa13.57□□□□□ -0.24
TSPAN4-212ENST00000494815 RBMY1A1P0DJD3 496 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-212ENST00000494815 RBMY1CP0DJD4 496 aa13.57□□□□□ -0.24
TSPAN4-212ENST00000494815 RBMY1FQ15415 496 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-212ENST00000494815 ETDBQ3ZM63 59 aa13.57□□□□□ -0.24
TSPAN4-212ENST00000494815 SH2D6Q7Z4S9 175 aa13.57□□□□□ -0.24
TSPAN4-212ENST00000494815 STHQ8IWL8 128 aa13.56□□□□□ -0.24
TSPAN4-212ENST00000494815 SCGB3A1Q96QR1 104 aa13.56□□□□□ -0.24
TSPAN4-212ENST00000494815 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-212ENST00000494815 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
TSPAN4-212ENST00000494815 MDFICQ9P1T7 246 aa13.56□□□□□ -0.24
TSPAN4-212ENST00000494815 BEAN1Q3B7T3 259 aa13.55□□□□□ -0.24
TSPAN4-212ENST00000494815 C14orf178Q8N769 122 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-212ENST00000494815 SUMO2P61956 95 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-212ENST00000494815 TRPT1Q86TN4 253 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-212ENST00000494815 SYT8Q8NBV8 401 aa13.55□□□□□ -0.24
TSPAN4-212ENST00000494815 C20orf78Q9BR46 151 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms