RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 MIR17HGQ75NE6 70 aa3.17□□□□□ -1.9
CCDC66-222ENST00000494672 C17orf82Q86X59 251 aaPredicted RBP3.17□□□□□ -1.9
CCDC66-222ENST00000494672 Q96M85 177 aa3.17□□□□□ -1.9
CCDC66-222ENST00000494672 TAC3Q9UHF0 121 aa3.17□□□□□ -1.9
CCDC66-222ENST00000494672 EML5Q05BV3 1969 aa3.17□□□□□ -1.9
CCDC66-222ENST00000494672 COL4A6Q14031 1691 aa3.17□□□□□ -1.9
CCDC66-222ENST00000494672 PLXNB2O15031 1838 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 IGKV1-12A0A0C4DH73 117 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 TMEM30CPA0ZSE6 113 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 F8WEM9 126 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 IGKV1D-12P01611 117 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 ZNF32P17041 273 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 DYNLT1P63172 113 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 NDPQ00604 133 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 SYCNQ0VAF6 134 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 C9orf66Q5T8R8 295 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 ZNF818PQ6ZRF7 136 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
CCDC66-222ENST00000494672 SMCR5Q8TEV8 140 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 RMI2Q96E14 147 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 TMEM141Q96I45 108 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 LINC00167Q96N53 147 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 CYP4F30PQ9H0H9 118 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 PROK2Q9HC23 129 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 PHLDA3Q9Y5J5 127 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 MYOFQ9NZM1 2061 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 MYO16Q9Y6X6 1858 aa3.16□□□□□ -1.9
CCDC66-222ENST00000494672 DSCAML1Q8TD84 2053 aa3.15□□□□□ -1.9
CCDC66-222ENST00000494672 IGHV1OR15-1A0A075B7D0 117 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 IGHV5-51A0A0C4DH38 117 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 PIN1P1O15428 100 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 GNRH2O43555 120 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 MIFP14174 115 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 NPPCP23582 126 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 FCER1GP30273 86 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 Q1RN00 199 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 ZNF826PQ6ZT77 177 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 ORMDL3Q8N138 153 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 PRO1854Q9UHT4 67 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 NDUFA12Q9UI09 145 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.91
CCDC66-222ENST00000494672 COL11A1P12107 1806 aaPredicted RBP3.14□□□□□ -1.91
CCDC66-222ENST00000494672 BRWD3Q6RI45 1802 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 IGLV3-9A0A075B6K5 115 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 IGLV3-32A0A0A0MS00 114 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 TRBV10-3A0A0K0K1G6 114 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 TMEM223A0PJW6 202 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 LY6G6DO95868 133 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 IGHV4-34P06331 123 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 IGHV1-2P23083 117 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 GDF5OSQ5U4N7 250 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 TMEM61Q8N0U2 210 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 DYNAPQ8N1N2 210 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 Q8N6K4 173 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 SCGB3A1Q96QR1 104 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 BPESC1Q9GZL8 116 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 SND1-IT1Q9HBX3 110 aa3.14□□□□□ -1.91
CCDC66-222ENST00000494672 IGKV6-21A0A0C4DH24 114 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 TRBV30A0A0K0K1B3 111 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 C16orf90A8MZG2 172 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 SH2D1AO60880 128 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 ERC2-IT1O76042 136 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 COX6CP09669 75 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 FAM229BQ4G0N7 80 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 CXCL17Q6UXB2 119 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 FAM167A-AS1Q96KT0 104 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 XAGE1AQ9HD64 81 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 PCNX2A6NKB5 2137 aa3.13□□□□□ -1.91
CCDC66-222ENST00000494672 HEATR1Q9H583 2144 aaKnown RBP3.13□□□□□ -1.91
CCDC66-222ENST00000494672 DSCAMO60469 2012 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 LTBP4Q8N2S1 1624 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 IGLV3-12A0A075B6K2 115 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 IGKV2D-26A0A0A0MRZ7 120 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 IGHV3-16A0A0C4DH30 117 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 RPL37AP8A6NKH3 93 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 E7EUB6 86 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 PLXNB1O43157 2135 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 RPL27AP46776 148 aaKnown RBP3.12□□□□□ -1.91
CCDC66-222ENST00000494672 RPL38P63173 70 aaKnown RBP3.12□□□□□ -1.91
CCDC66-222ENST00000494672 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 CCL28Q9NRJ3 127 aa3.12□□□□□ -1.91
CCDC66-222ENST00000494672 TRAV22A0A0B4J277 110 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 FAM168BA1KXE4 195 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 ZNF815PA8K554 130 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 HCG22E2RYF7 251 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 C5orf67F2Z3F1 127 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 IGHV3-48P01763 117 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 SPINT3P49223 89 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 RPS27LQ71UM5 84 aaKnown RBP3.11□□□□□ -1.91
CCDC66-222ENST00000494672 SPTSSBQ8NFR3 76 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 RETNLBQ9BQ08 111 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 PSENENQ9NZ42 101 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 MPDZO75970 2070 aa3.11□□□□□ -1.91
CCDC66-222ENST00000494672 ARID1AO14497 2285 aa3.1□□□□□ -1.91
CCDC66-222ENST00000494672 hDV103S1A0JD37 113 aa3.1□□□□□ -1.91
CCDC66-222ENST00000494672 SPINK4O60575 86 aa3.1□□□□□ -1.91
CCDC66-222ENST00000494672 IGHV3-33P01772 117 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms