RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 H3BVH4 76 aa9.2□□□□□ -0.94
ERCC3-209ENST00000494464 M0R2N4 97 aa9.2□□□□□ -0.94
ERCC3-209ENST00000494464 NUDT3O95989 172 aa9.2□□□□□ -0.94
ERCC3-209ENST00000494464 PPBPP02775 128 aa9.2□□□□□ -0.94
ERCC3-209ENST00000494464 AMN1Q8IY45 258 aa9.2□□□□□ -0.94
ERCC3-209ENST00000494464 ORMDL3Q8N138 153 aa9.2□□□□□ -0.94
ERCC3-209ENST00000494464 OR10AG1Q8NH19 301 aa9.2□□□□□ -0.94
ERCC3-209ENST00000494464 IGLV2-18A0A075B6J9 118 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 NXPH4O95158 308 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 CCL18P55774 89 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 ZNF415Q09FC8 603 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 MRPL51Q4U2R6 128 aaKnown RBP9.19□□□□□ -0.94
ERCC3-209ENST00000494464 FAM159AQ6UWV7 190 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 SMIM15Q7Z3B0 74 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 RNF185Q96GF1 192 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 LAMTOR2Q9Y2Q5 125 aa9.19□□□□□ -0.94
ERCC3-209ENST00000494464 TRGV2A0A075B6R0 118 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 TRGV1A0A0A0MS02 117 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 D6R8Y8 96 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 RTL8CO15255 209 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 HSBP1O75506 76 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 S100A4P26447 101 aaKnown RBP9.18□□□□□ -0.94
ERCC3-209ENST00000494464 AMTP48728 403 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 SPANXN1Q5VSR9 72 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 ZNRF2Q8NHG8 242 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 URB1-AS1Q96HZ7 61 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 MSRB1Q9NZV6 116 aa9.18□□□□□ -0.94
ERCC3-209ENST00000494464 RNASE3P12724 160 aaKnown RBP9.17□□□□□ -0.94
ERCC3-209ENST00000494464 RAB4AP20338 218 aa9.17□□□□□ -0.94
ERCC3-209ENST00000494464 PMCHP20382 165 aa9.17□□□□□ -0.94
ERCC3-209ENST00000494464 RNASEKQ6P5S7 137 aaKnown RBP9.17□□□□□ -0.94
ERCC3-209ENST00000494464 NIT1Q86X76 327 aa9.17□□□□□ -0.94
ERCC3-209ENST00000494464 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
ERCC3-209ENST00000494464 NIT2Q9NQR4 276 aa9.17□□□□□ -0.94
ERCC3-209ENST00000494464 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
ERCC3-209ENST00000494464 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
ERCC3-209ENST00000494464 LINC00614P0C842 121 aa9.16□□□□□ -0.94
ERCC3-209ENST00000494464 PHLDA3Q9Y5J5 127 aa9.16□□□□□ -0.94
ERCC3-209ENST00000494464 PKHD1P08F94 4074 aa9.16□□□□□ -0.94
ERCC3-209ENST00000494464 MUC4Q99102 2169 aa9.15□□□□□ -0.94
ERCC3-209ENST00000494464 TRGV11A0A075B6L2 103 aa9.15□□□□□ -0.94
ERCC3-209ENST00000494464 A0A0J9YY99 117 aa9.15□□□□□ -0.94
ERCC3-209ENST00000494464 PRSS29PA6NIE9 313 aa9.15□□□□□ -0.94
ERCC3-209ENST00000494464 CKS2P33552 79 aa9.15□□□□□ -0.94
ERCC3-209ENST00000494464 SSTP61278 116 aa9.15□□□□□ -0.94
ERCC3-209ENST00000494464 VSIG2Q96IQ7 327 aa9.15□□□□□ -0.94
ERCC3-209ENST00000494464 C9orf85Q96MD7 179 aa9.15□□□□□ -0.94
ERCC3-209ENST00000494464 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
ERCC3-209ENST00000494464 IGHV3-16A0A0C4DH30 117 aa9.14□□□□□ -0.95
ERCC3-209ENST00000494464 NBDYA0A0U1RRE5 68 aa9.14□□□□□ -0.95
ERCC3-209ENST00000494464 GNRH2O43555 120 aa9.14□□□□□ -0.95
ERCC3-209ENST00000494464 S100A12P80511 92 aa9.14□□□□□ -0.95
ERCC3-209ENST00000494464 MRAP2Q96G30 205 aa9.14□□□□□ -0.95
ERCC3-209ENST00000494464 AP1S3Q96PC3 154 aa9.14□□□□□ -0.95
ERCC3-209ENST00000494464 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
ERCC3-209ENST00000494464 PKD1P98161 4303 aa9.14□□□□□ -0.95
ERCC3-209ENST00000494464 IGHV1-24A0A0C4DH33 117 aa9.13□□□□□ -0.95
ERCC3-209ENST00000494464 NPYP01303 97 aa9.13□□□□□ -0.95
ERCC3-209ENST00000494464 EVI2AP22794 236 aa9.13□□□□□ -0.95
ERCC3-209ENST00000494464 C1orf134Q5TEV5 83 aa9.13□□□□□ -0.95
ERCC3-209ENST00000494464 SPXQ9BT56 116 aa9.13□□□□□ -0.95
ERCC3-209ENST00000494464 DPH3P1Q9H4G8 78 aa9.13□□□□□ -0.95
ERCC3-209ENST00000494464 AP5S1Q9NUS5 200 aa9.13□□□□□ -0.95
ERCC3-209ENST00000494464 MDFICQ9P1T7 246 aa9.13□□□□□ -0.95
ERCC3-209ENST00000494464 A0A096LPF7 62 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 M0R381 172 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 FA2HQ7L5A8 372 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 PRSS3P2Q8NHM4 247 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 MAP1LC3AQ9H492 121 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
ERCC3-209ENST00000494464 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
ERCC3-209ENST00000494464 PRSS47A8MTI9 375 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 SMKR1H3BMG3 65 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 NCR2O95944 276 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 ESRGQ1W209 222 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 CDPF1Q6NVV7 123 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 RASL10AQ92737 203 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 PRO0255Q9UI72 69 aa9.12□□□□□ -0.95
ERCC3-209ENST00000494464 DNAH11Q96DT5 4516 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 CRYBA4P53673 196 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 FHL2Q14192 279 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 TTC32Q5I0X7 151 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 NRACQ8N912 160 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 SYT8Q8NBV8 401 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 Q9H8V8 135 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 NXT2Q9NPJ8 142 aaKnown RBP9.11□□□□□ -0.95
ERCC3-209ENST00000494464 ICOSQ9Y6W8 199 aa9.11□□□□□ -0.95
ERCC3-209ENST00000494464 PAX4O43316 350 aa9.1□□□□□ -0.95
ERCC3-209ENST00000494464 SCGB1D1O95968 90 aa9.1□□□□□ -0.95
ERCC3-209ENST00000494464 C3orf79P0CE67 100 aa9.1□□□□□ -0.95
ERCC3-209ENST00000494464 IFI27P40305 119 aaPredicted RBP9.1□□□□□ -0.95
ERCC3-209ENST00000494464 C6orf223Q8N319 242 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms