RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 RPL35AP18077 110 aaKnown RBP4.86□□□□□ -1.63
MSH5-217ENST00000494458 KRTAP10-11P60412 298 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 CDPF1Q6NVV7 123 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 C12orf54Q6X4T0 127 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 RPL39LQ96EH5 51 aaKnown RBP4.86□□□□□ -1.63
MSH5-217ENST00000494458 TMEM70Q9BUB7 260 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 NIT2Q9NQR4 276 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 ZMAT5Q9UDW3 170 aaKnown RBP4.86□□□□□ -1.63
MSH5-217ENST00000494458 STAB1Q9NY15 2570 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 COL6A5A8TX70 2615 aa4.86□□□□□ -1.63
MSH5-217ENST00000494458 TRAV4A0A0B4J268 109 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 LOC389332A0A1B0GUA5 103 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 LINC01549A6NIU2 74 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 SYS1-DBNDD2H3BUS1 97 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 VCYO14598 125 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 HBDP02042 147 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 BTF3P20290 206 aaKnown RBP4.85□□□□□ -1.63
MSH5-217ENST00000494458 RIPPLY3P57055 190 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 LAGE3Q14657 143 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 RRN3P1Q2M238 152 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 ORMDL2Q53FV1 153 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 SAMD5Q5TGI4 173 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 PET117Q6UWS5 81 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 Q6ZSN1 163 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 LINC00173Q6ZV60 143 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 DNAJC30Q96LL9 226 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 ST20Q9HBF5 79 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 HSPB8Q9UJY1 196 aa4.85□□□□□ -1.63
MSH5-217ENST00000494458 TRBV10-1A0A0K0K1A3 114 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 SDHAF1A6NFY7 115 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 H7C1H1 209 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 TCAPO15273 167 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 IGHV4-30-4P0DP06 118 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 HTN1P15515 57 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 APOC4P55056 127 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 S100A12P80511 92 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 PMCHL1Q16048 86 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 OXLD1Q5BKU9 147 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 KPRPQ5T749 579 aaPredicted RBP4.84□□□□□ -1.63
MSH5-217ENST00000494458 LINC01545Q5VT33 79 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 TOMM6Q96B49 74 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 RNF183Q96D59 192 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 TMEM208Q9BTX3 173 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 ZMAT4Q9H898 229 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 PKD1L1Q8TDX9 2849 aa4.84□□□□□ -1.63
MSH5-217ENST00000494458 NACAE9PAV3 2078 aa4.84□□□□□ -1.64
MSH5-217ENST00000494458 MGPP08493 103 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 P0DMU3 169 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 FAM231AP0DMU4 169 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 FAM231CP0DMU5 169 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 G0S2P27469 103 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 RHOHQ15669 191 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 LGALS9CQ6DKI2 356 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 Q6ZTI0 123 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 ZNF664Q8N3J9 261 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
MSH5-217ENST00000494458 TP53TG1Q9Y2A0 90 aa4.83□□□□□ -1.64
MSH5-217ENST00000494458 IGIPA6NJ69 53 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 F5H697 171 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 I3L3M4 83 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 ATP5LO75964 103 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 SCGB1D1O95968 90 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 TSHBP01222 138 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 NPSP0C0P6 89 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 LINC00694P0DN24 101 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 MIFP14174 115 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 KRTDAPP60985 99 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 FHL2Q14192 279 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 FAM74A4Q5TZK3 123 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 Q8NAQ8 132 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 NEXN-AS1Q8NBZ9 246 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 IFI27L1Q96BM0 104 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 ZNF479Q96JC4 524 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 MAP1LC3CQ9BXW4 147 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 NOP10Q9NPE3 64 aaKnown RBP4.82□□□□□ -1.64
MSH5-217ENST00000494458 Q9UF83 564 aa4.82□□□□□ -1.64
MSH5-217ENST00000494458 IGHV3OR16-12A0A075B7B8 117 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 TRGV1A0A0A0MS02 117 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 TRAV12-1A0A0B4J245 112 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 TRBV6-4A0A1B0GX49 114 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 C20orf202A1L168 122 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 LYRM9A8MSI8 78 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 PKIAP61925 76 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 ZNF56Q15929 161 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 ERASQ7Z444 233 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 OR4C5Q8NGB2 326 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 FAM104AQ969W3 186 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 TIMM17AQ99595 171 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 KIR2DL4Q99706 377 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 MDFIQ99750 246 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
MSH5-217ENST00000494458 TRBV7-3A0A075B6L6 115 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 CRYBA4P53673 196 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 UBE2D3P61077 147 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 UBE2D2P62837 147 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 ODF1Q14990 250 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 C2orf66Q6UXQ4 117 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 SLC25A29Q8N8R3 303 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 C20orf203Q8NBC4 194 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms