RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 M0QY20 66 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 PHOX2AO14813 284 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 APCSP02743 223 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 LINC00315P59091 139 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 GAGE1Q13065 139 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 GAGE4Q13068 117 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 GAGE5Q13069 117 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 GAGE13Q4V321 117 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 DAZ4Q86SG3 579 aaKnown RBP10.44□□□□□ -0.74
ACTB-213ENST00000493945 VSIG2Q96IQ7 327 aa10.44□□□□□ -0.74
ACTB-213ENST00000493945 DAZ3Q9NR90 486 aaKnown RBP10.44□□□□□ -0.74
ACTB-213ENST00000493945 P0DMU3 169 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 FAM231AP0DMU4 169 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 FAM231CP0DMU5 169 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 CCL18P55774 89 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 MRPL51Q4U2R6 128 aaKnown RBP10.43□□□□□ -0.74
ACTB-213ENST00000493945 TMEM136Q6ZRR5 245 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 ATP6V0E2Q8NHE4 81 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 ST20Q9HBF5 79 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 TRAPPC1Q9Y5R8 145 aa10.43□□□□□ -0.74
ACTB-213ENST00000493945 D6R8Y8 96 aa10.42□□□□□ -0.74
ACTB-213ENST00000493945 TCAPO15273 167 aa10.42□□□□□ -0.74
ACTB-213ENST00000493945 CASC10Q5T4H9 136 aa10.42□□□□□ -0.74
ACTB-213ENST00000493945 UBE2DNLQ8IWF7 75 aa10.42□□□□□ -0.74
ACTB-213ENST00000493945 NEXN-AS1Q8NBZ9 246 aa10.42□□□□□ -0.74
ACTB-213ENST00000493945 RNF185Q96GF1 192 aa10.42□□□□□ -0.74
ACTB-213ENST00000493945 MRPL18Q9H0U6 180 aaKnown RBP10.42□□□□□ -0.74
ACTB-213ENST00000493945 A0A096LPF7 62 aa10.41□□□□□ -0.74
ACTB-213ENST00000493945 TRAV26-2A0A0B4J265 109 aa10.41□□□□□ -0.74
ACTB-213ENST00000493945 FABP9Q0Z7S8 132 aa10.41□□□□□ -0.74
ACTB-213ENST00000493945 PRELID3AQ96N28 172 aa10.41□□□□□ -0.74
ACTB-213ENST00000493945 C20orf78Q9BR46 151 aa10.41□□□□□ -0.74
ACTB-213ENST00000493945 TRBV6-5A0A0K0K1A5 114 aa10.4□□□□□ -0.74
ACTB-213ENST00000493945 TIRAPP58753 221 aa10.4□□□□□ -0.74
ACTB-213ENST00000493945 PKIAP61925 76 aa10.4□□□□□ -0.74
ACTB-213ENST00000493945 Q6ZSN1 163 aa10.4□□□□□ -0.74
ACTB-213ENST00000493945 GTSF1LQ9H1H1 148 aa10.4□□□□□ -0.74
ACTB-213ENST00000493945 MAP1LC3AQ9H492 121 aa10.4□□□□□ -0.74
ACTB-213ENST00000493945 NCR2O95944 276 aa10.39□□□□□ -0.75
ACTB-213ENST00000493945 RPS10P46783 165 aaKnown RBP10.39□□□□□ -0.75
ACTB-213ENST00000493945 UBE2D3P61077 147 aa10.39□□□□□ -0.75
ACTB-213ENST00000493945 SUMO2P61956 95 aaKnown RBP10.39□□□□□ -0.75
ACTB-213ENST00000493945 UBE2D2P62837 147 aa10.39□□□□□ -0.75
ACTB-213ENST00000493945 KIR2DL4Q99706 377 aa10.39□□□□□ -0.75
ACTB-213ENST00000493945 APLNQ9ULZ1 77 aa10.39□□□□□ -0.75
ACTB-213ENST00000493945 TRAV8-6A0A0B4J262 113 aa10.38□□□□□ -0.75
ACTB-213ENST00000493945 LOC100131303A0A0U1RQF7 123 aa10.38□□□□□ -0.75
ACTB-213ENST00000493945 SDHAF1A6NFY7 115 aa10.38□□□□□ -0.75
ACTB-213ENST00000493945 TNFRSF6BO95407 300 aa10.38□□□□□ -0.75
ACTB-213ENST00000493945 LINC00694P0DN24 101 aa10.38□□□□□ -0.75
ACTB-213ENST00000493945 PMCHP20382 165 aa10.38□□□□□ -0.75
ACTB-213ENST00000493945 COTL1Q14019 142 aa10.38□□□□□ -0.75
ACTB-213ENST00000493945 YPEL4Q96NS1 127 aa10.38□□□□□ -0.75
ACTB-213ENST00000493945 I3L3M4 83 aa10.37□□□□□ -0.75
ACTB-213ENST00000493945 VCYO14598 125 aa10.37□□□□□ -0.75
ACTB-213ENST00000493945 RAB5AP20339 215 aa10.37□□□□□ -0.75
ACTB-213ENST00000493945 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
ACTB-213ENST00000493945 SMAGPQ0VAQ4 97 aa10.37□□□□□ -0.75
ACTB-213ENST00000493945 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
ACTB-213ENST00000493945 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
ACTB-213ENST00000493945 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
ACTB-213ENST00000493945 SCO1O75880 301 aa10.36□□□□□ -0.75
ACTB-213ENST00000493945 FCER1GP30273 86 aa10.36□□□□□ -0.75
ACTB-213ENST00000493945 NXT2Q9NPJ8 142 aaKnown RBP10.36□□□□□ -0.75
ACTB-213ENST00000493945 LELP1Q5T871 98 aa10.35□□□□□ -0.75
ACTB-213ENST00000493945 NRACQ8N912 160 aa10.35□□□□□ -0.75
ACTB-213ENST00000493945 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
ACTB-213ENST00000493945 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
ACTB-213ENST00000493945 DNAH7Q8WXX0 4024 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 IGHV1-24A0A0C4DH33 117 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 COLCA2A8K830 154 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 K7EMI3 77 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 UBE2L6O14933 153 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 NPYP01303 97 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 G0S2P27469 103 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 LYPD5Q6UWN5 251 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
ACTB-213ENST00000493945 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
ACTB-213ENST00000493945 AMTP48728 403 aa10.33□□□□□ -0.76
ACTB-213ENST00000493945 KIAA1644Q3SXP7 199 aa10.33□□□□□ -0.76
ACTB-213ENST00000493945 LGALS9CQ6DKI2 356 aa10.33□□□□□ -0.76
ACTB-213ENST00000493945 TRBV6-8A0A0A6YYG3 113 aa10.32□□□□□ -0.76
ACTB-213ENST00000493945 IGHV3-38A0A0C4DH36 116 aa10.32□□□□□ -0.76
ACTB-213ENST00000493945 RAB5BP61020 215 aa10.32□□□□□ -0.76
ACTB-213ENST00000493945 PRSS3P2Q8NHM4 247 aa10.32□□□□□ -0.76
ACTB-213ENST00000493945 ALKBH7Q9BT30 221 aaPredicted RBP10.32□□□□□ -0.76
ACTB-213ENST00000493945 UPK3BQ9BT76 320 aa10.32□□□□□ -0.76
ACTB-213ENST00000493945 PRSS47A8MTI9 375 aa10.31□□□□□ -0.76
ACTB-213ENST00000493945 POLR2KP53803 58 aaKnown RBP10.31□□□□□ -0.76
ACTB-213ENST00000493945 ESRGQ1W209 222 aa10.31□□□□□ -0.76
ACTB-213ENST00000493945 TMEM243Q9BU79 118 aa10.31□□□□□ -0.76
ACTB-213ENST00000493945 TRAV9-2A0A087WT02 112 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 K7EP13 123 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 TRGC2P03986 189 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 IQCJQ1A5X6 159 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 ORMDL2Q53FV1 153 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms