RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 UBR4Q5T4S7 5183 aa11.2□□□□□ -0.62
COL9A1-210ENST00000493682 PKHD1L1Q86WI1 4243 aa11.19□□□□□ -0.62
COL9A1-210ENST00000493682 PKIAP61925 76 aa11.19□□□□□ -0.62
COL9A1-210ENST00000493682 STOML3Q8TAV4 291 aa11.19□□□□□ -0.62
COL9A1-210ENST00000493682 ZNF471Q9BX82 626 aaPredicted RBP11.19□□□□□ -0.62
COL9A1-210ENST00000493682 CXCL1P09341 107 aa11.18□□□□□ -0.62
COL9A1-210ENST00000493682 NTM-AS1Q6ZSK4 140 aa11.18□□□□□ -0.62
COL9A1-210ENST00000493682 C9orf163Q8N9P6 203 aa11.18□□□□□ -0.62
COL9A1-210ENST00000493682 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.18□□□□□ -0.62
COL9A1-210ENST00000493682 PRR34Q9NV39 138 aa11.18□□□□□ -0.62
COL9A1-210ENST00000493682 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
COL9A1-210ENST00000493682 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
COL9A1-210ENST00000493682 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
COL9A1-210ENST00000493682 PAGE4O60829 102 aa11.17□□□□□ -0.62
COL9A1-210ENST00000493682 KRTAP26-1Q6PEX3 210 aa11.17□□□□□ -0.62
COL9A1-210ENST00000493682 CLPSL2Q6UWE3 100 aa11.17□□□□□ -0.62
COL9A1-210ENST00000493682 SSBP4Q9BWG4 385 aaPredicted RBP11.17□□□□□ -0.62
COL9A1-210ENST00000493682 CYTL1Q9NRR1 136 aa11.17□□□□□ -0.62
COL9A1-210ENST00000493682 F5H697 171 aa11.16□□□□□ -0.62
COL9A1-210ENST00000493682 PANO1I0J062 215 aa11.16□□□□□ -0.62
COL9A1-210ENST00000493682 SNAI2O43623 268 aa11.16□□□□□ -0.62
COL9A1-210ENST00000493682 RBX1P62877 108 aa11.16□□□□□ -0.62
COL9A1-210ENST00000493682 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
COL9A1-210ENST00000493682 LINC00269Q8N2A0 174 aa11.16□□□□□ -0.62
COL9A1-210ENST00000493682 MLST8Q9BVC4 326 aa11.16□□□□□ -0.62
COL9A1-210ENST00000493682 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
COL9A1-210ENST00000493682 G3V3Q6 166 aa11.15□□□□□ -0.62
COL9A1-210ENST00000493682 S100A9P06702 114 aaKnown RBP11.15□□□□□ -0.62
COL9A1-210ENST00000493682 OR5AL1P0C617 328 aa11.15□□□□□ -0.62
COL9A1-210ENST00000493682 GAGE6Q13070 117 aa11.15□□□□□ -0.62
COL9A1-210ENST00000493682 SPANXN1Q5VSR9 72 aa11.15□□□□□ -0.62
COL9A1-210ENST00000493682 SDIM1Q6ZPB5 146 aa11.15□□□□□ -0.62
COL9A1-210ENST00000493682 SSTP61278 116 aa11.14□□□□□ -0.63
COL9A1-210ENST00000493682 BAGE2Q86Y30 109 aa11.14□□□□□ -0.63
COL9A1-210ENST00000493682 DERL1Q9BUN8 251 aa11.14□□□□□ -0.63
COL9A1-210ENST00000493682 KIF25-AS1Q9Y6Z4 181 aa11.14□□□□□ -0.63
COL9A1-210ENST00000493682 SCO2A0A1W2PP80 73 aa11.13□□□□□ -0.63
COL9A1-210ENST00000493682 ARPC5O15511 151 aa11.13□□□□□ -0.63
COL9A1-210ENST00000493682 TRBV25-1A0A075B6N4 114 aa11.12□□□□□ -0.63
COL9A1-210ENST00000493682 MT1HL1P0DM35 61 aa11.12□□□□□ -0.63
COL9A1-210ENST00000493682 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
COL9A1-210ENST00000493682 IQCJQ1A5X6 159 aa11.11□□□□□ -0.63
COL9A1-210ENST00000493682 CLRN3Q8NCR9 226 aa11.11□□□□□ -0.63
COL9A1-210ENST00000493682 SFT2D1Q8WV19 159 aa11.11□□□□□ -0.63
COL9A1-210ENST00000493682 IGLV10-54A0A075B6I4 117 aa11.1□□□□□ -0.63
COL9A1-210ENST00000493682 A0A0D9SG52 128 aa11.1□□□□□ -0.63
COL9A1-210ENST00000493682 A0A1B0GV50 99 aa11.1□□□□□ -0.63
COL9A1-210ENST00000493682 REG3AQ06141 175 aa11.1□□□□□ -0.63
COL9A1-210ENST00000493682 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
COL9A1-210ENST00000493682 MBD3L1Q8WWY6 194 aa11.1□□□□□ -0.63
COL9A1-210ENST00000493682 AP1S3Q96PC3 154 aa11.1□□□□□ -0.63
COL9A1-210ENST00000493682 IGHV1-24A0A0C4DH33 117 aa11.09□□□□□ -0.63
COL9A1-210ENST00000493682 PFDN1O60925 122 aa11.09□□□□□ -0.63
COL9A1-210ENST00000493682 CNBPP62633 177 aaKnown RBP11.09□□□□□ -0.63
COL9A1-210ENST00000493682 FAM213BQ8TBF2 198 aa11.09□□□□□ -0.63
COL9A1-210ENST00000493682 hDV102S1A0JD36 115 aa11.08□□□□□ -0.64
COL9A1-210ENST00000493682 M0QY20 66 aa11.08□□□□□ -0.64
COL9A1-210ENST00000493682 Q6ZRU5 148 aa11.08□□□□□ -0.64
COL9A1-210ENST00000493682 TMUB2Q71RG4 321 aa11.08□□□□□ -0.64
COL9A1-210ENST00000493682 C20orf203Q8NBC4 194 aa11.08□□□□□ -0.64
COL9A1-210ENST00000493682 TRAV8-4A0A0B4J246 113 aa11.06□□□□□ -0.64
COL9A1-210ENST00000493682 UMAD1C9J7I0 102 aa11.06□□□□□ -0.64
COL9A1-210ENST00000493682 P01737 135 aa11.06□□□□□ -0.64
COL9A1-210ENST00000493682 MGPP08493 103 aa11.06□□□□□ -0.64
COL9A1-210ENST00000493682 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
COL9A1-210ENST00000493682 IGLV4-60A0A075B6I1 120 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 SMLR1H3BR10 107 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 H7C1H1 209 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 SLPIP03973 132 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 GZMBP10144 247 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 RPL35P42766 123 aaKnown RBP11.05□□□□□ -0.64
COL9A1-210ENST00000493682 KCNRGQ8N5I3 272 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 TPPP3Q9BW30 176 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 GFRA4Q9GZZ7 299 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 BATF3Q9NR55 127 aa11.05□□□□□ -0.64
COL9A1-210ENST00000493682 A0A1B0GUV1 79 aa11.04□□□□□ -0.64
COL9A1-210ENST00000493682 IGLC6P0CF74 106 aa11.04□□□□□ -0.64
COL9A1-210ENST00000493682 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
COL9A1-210ENST00000493682 RAB5CP51148 216 aa11.04□□□□□ -0.64
COL9A1-210ENST00000493682 RNF185Q96GF1 192 aa11.04□□□□□ -0.64
COL9A1-210ENST00000493682 TMEM243Q9BU79 118 aa11.04□□□□□ -0.64
COL9A1-210ENST00000493682 AP5S1Q9NUS5 200 aa11.04□□□□□ -0.64
COL9A1-210ENST00000493682 A0A087WYN8 130 aa11.03□□□□□ -0.64
COL9A1-210ENST00000493682 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.03□□□□□ -0.64
COL9A1-210ENST00000493682 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
COL9A1-210ENST00000493682 NKX2-5P52952 324 aaPredicted RBP11.03□□□□□ -0.64
COL9A1-210ENST00000493682 FER1L6-AS1Q8NA97 138 aa11.03□□□□□ -0.64
COL9A1-210ENST00000493682 SPACA4Q8TDM5 124 aa11.03□□□□□ -0.64
COL9A1-210ENST00000493682 ZNF345Q14585 488 aa11.02□□□□□ -0.65
COL9A1-210ENST00000493682 RPS20P60866 119 aaKnown RBP11.01□□□□□ -0.65
COL9A1-210ENST00000493682 CACNG7P62955 275 aa11.01□□□□□ -0.65
COL9A1-210ENST00000493682 CENPWQ5EE01 88 aa11.01□□□□□ -0.65
COL9A1-210ENST00000493682 RASL11AQ6T310 242 aa11.01□□□□□ -0.65
COL9A1-210ENST00000493682 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
COL9A1-210ENST00000493682 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
COL9A1-210ENST00000493682 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
COL9A1-210ENST00000493682 PLAC8Q9NZF1 115 aa11□□□□□ -0.65
COL9A1-210ENST00000493682 C19orf71A6NCJ1 209 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms