RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 CENPWQ5EE01 88 aa9.6□□□□□ -0.87
ATG4B-223ENST00000493618 ENHOQ6UWT2 76 aa9.6□□□□□ -0.87
ATG4B-223ENST00000493618 Q6ZSA8 131 aa9.6□□□□□ -0.87
ATG4B-223ENST00000493618 Q8N976 141 aa9.6□□□□□ -0.87
ATG4B-223ENST00000493618 CHCHD5Q9BSY4 110 aa9.6□□□□□ -0.87
ATG4B-223ENST00000493618 CRPP02741 224 aa9.59□□□□□ -0.87
ATG4B-223ENST00000493618 ANGP03950 147 aaKnown RBP9.59□□□□□ -0.87
ATG4B-223ENST00000493618 MGPP08493 103 aa9.59□□□□□ -0.87
ATG4B-223ENST00000493618 SMIM17P0DL12 118 aa9.59□□□□□ -0.87
ATG4B-223ENST00000493618 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
ATG4B-223ENST00000493618 C11orf52Q96A22 123 aa9.59□□□□□ -0.87
ATG4B-223ENST00000493618 KIF25-AS1Q9Y6Z4 181 aa9.59□□□□□ -0.87
ATG4B-223ENST00000493618 IGLV2-8P01709 118 aa9.58□□□□□ -0.88
ATG4B-223ENST00000493618 Q0VG73 95 aa9.58□□□□□ -0.88
ATG4B-223ENST00000493618 ATRAIDQ6UW56 229 aa9.58□□□□□ -0.88
ATG4B-223ENST00000493618 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
ATG4B-223ENST00000493618 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
ATG4B-223ENST00000493618 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
ATG4B-223ENST00000493618 AP1S3Q96PC3 154 aa9.58□□□□□ -0.88
ATG4B-223ENST00000493618 C1orf43Q9BWL3 253 aa9.58□□□□□ -0.88
ATG4B-223ENST00000493618 FLG2Q5D862 2391 aaPredicted RBP9.58□□□□□ -0.88
ATG4B-223ENST00000493618 GAGE6Q13070 117 aa9.57□□□□□ -0.88
ATG4B-223ENST00000493618 SCXQ7RTU7 201 aa9.57□□□□□ -0.88
ATG4B-223ENST00000493618 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
ATG4B-223ENST00000493618 FER1L6-AS1Q8NA97 138 aa9.57□□□□□ -0.88
ATG4B-223ENST00000493618 DAZAP1Q96EP5 407 aaKnown RBP9.57□□□□□ -0.88
ATG4B-223ENST00000493618 TRAV1-1A0A0B4J248 108 aa9.56□□□□□ -0.88
ATG4B-223ENST00000493618 HLA-DQA1P01909 254 aa9.56□□□□□ -0.88
ATG4B-223ENST00000493618 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
ATG4B-223ENST00000493618 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
ATG4B-223ENST00000493618 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
ATG4B-223ENST00000493618 GNG4P50150 75 aa9.55□□□□□ -0.88
ATG4B-223ENST00000493618 SULT1A2P50226 295 aa9.55□□□□□ -0.88
ATG4B-223ENST00000493618 RAB5CP51148 216 aa9.55□□□□□ -0.88
ATG4B-223ENST00000493618 SUMO4Q6EEV6 95 aa9.55□□□□□ -0.88
ATG4B-223ENST00000493618 DEFB104AQ8WTQ1 72 aa9.55□□□□□ -0.88
ATG4B-223ENST00000493618 MED9Q9NWA0 146 aa9.55□□□□□ -0.88
ATG4B-223ENST00000493618 VAX2Q9UIW0 290 aa9.55□□□□□ -0.88
ATG4B-223ENST00000493618 TEX46H3BTG2 121 aa9.54□□□□□ -0.88
ATG4B-223ENST00000493618 RPS20P60866 119 aaKnown RBP9.54□□□□□ -0.88
ATG4B-223ENST00000493618 RBX1P62877 108 aa9.54□□□□□ -0.88
ATG4B-223ENST00000493618 PKHD1L1Q86WI1 4243 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 TRBV25-1A0A075B6N4 114 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 USP17L23D6RBM5 183 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 M0QY20 66 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 P01737 135 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 NKX2-5P52952 324 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-223ENST00000493618 CACNG7P62955 275 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-223ENST00000493618 TMEM97Q5BJF2 176 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 EIF5AL1Q6IS14 154 aaKnown RBP9.53□□□□□ -0.88
ATG4B-223ENST00000493618 LYZL1Q6UWQ5 148 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 LINC00269Q8N2A0 174 aa9.53□□□□□ -0.88
ATG4B-223ENST00000493618 TRBV20OR9-2A0A075B6H5 130 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 PDE6DO43924 150 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 IFNA1P01562 189 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 BCL2P10415 239 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 PKIAP61925 76 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 MIAQ16674 131 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 C14orf177Q52M58 125 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 CIRBP-AS1Q8TBR5 109 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 CHAC1Q9BUX1 264 aa9.52□□□□□ -0.89
ATG4B-223ENST00000493618 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
ATG4B-223ENST00000493618 J3QL48 77 aa9.51□□□□□ -0.89
ATG4B-223ENST00000493618 PRSS1P07477 247 aa9.51□□□□□ -0.89
ATG4B-223ENST00000493618 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 H7C1H1 209 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 NTF3P20783 257 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 TCTE3Q8IZS6 198 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 NUDT10Q8NFP7 164 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 SMIM12Q96EX1 92 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 NUDT11Q96G61 164 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 PRR34Q9NV39 138 aa9.5□□□□□ -0.89
ATG4B-223ENST00000493618 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
ATG4B-223ENST00000493618 F2Z2F3 143 aa9.49□□□□□ -0.89
ATG4B-223ENST00000493618 TRGC1P0CF51 173 aa9.49□□□□□ -0.89
ATG4B-223ENST00000493618 KRTAP26-1Q6PEX3 210 aa9.49□□□□□ -0.89
ATG4B-223ENST00000493618 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
ATG4B-223ENST00000493618 SLC51BQ86UW2 128 aa9.49□□□□□ -0.89
ATG4B-223ENST00000493618 DPH3P1Q9H4G8 78 aa9.49□□□□□ -0.89
ATG4B-223ENST00000493618 REG3AQ06141 175 aa9.48□□□□□ -0.89
ATG4B-223ENST00000493618 TMEM243Q9BU79 118 aa9.48□□□□□ -0.89
ATG4B-223ENST00000493618 RNASE7Q9H1E1 156 aaKnown RBP9.48□□□□□ -0.89
ATG4B-223ENST00000493618 IGLV4-60A0A075B6I1 120 aa9.47□□□□□ -0.89
ATG4B-223ENST00000493618 K7EN84 100 aa9.47□□□□□ -0.89
ATG4B-223ENST00000493618 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
ATG4B-223ENST00000493618 TWIST1Q15672 202 aa9.47□□□□□ -0.89
ATG4B-223ENST00000493618 C20orf203Q8NBC4 194 aa9.47□□□□□ -0.89
ATG4B-223ENST00000493618 OCC1Q8TAD7 63 aa9.47□□□□□ -0.89
ATG4B-223ENST00000493618 GFRA4Q9GZZ7 299 aa9.47□□□□□ -0.89
ATG4B-223ENST00000493618 NIT2Q9NQR4 276 aa9.47□□□□□ -0.89
ATG4B-223ENST00000493618 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
ATG4B-223ENST00000493618 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.9
ATG4B-223ENST00000493618 CTRLP40313 264 aa9.46□□□□□ -0.9
ATG4B-223ENST00000493618 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.9
ATG4B-223ENST00000493618 FAT3Q8TDW7 4589 aa9.46□□□□□ -0.9
ATG4B-223ENST00000493618 C9orf62Q8N4C0 152 aa9.45□□□□□ -0.9
ATG4B-223ENST00000493618 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
ATG4B-223ENST00000493618 UBE2L6O14933 153 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms