RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 ZNF580Q9UK33 172 aa11.37□□□□□ -0.59
TNFRSF1B-203ENST00000492361 TNFRSF18Q9Y5U5 241 aa11.37□□□□□ -0.59
TNFRSF1B-203ENST00000492361 A8MZ25 164 aa11.36□□□□□ -0.59
TNFRSF1B-203ENST00000492361 HIST2H2BCQ6DN03 193 aa11.36□□□□□ -0.59
TNFRSF1B-203ENST00000492361 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1B-203ENST00000492361 TMEM238LA0A1B0GVL6 79 aa11.35□□□□□ -0.59
TNFRSF1B-203ENST00000492361 A6NJY4 79 aa11.35□□□□□ -0.59
TNFRSF1B-203ENST00000492361 COX6B1P14854 86 aa11.35□□□□□ -0.59
TNFRSF1B-203ENST00000492361 PMVKQ15126 192 aa11.35□□□□□ -0.59
TNFRSF1B-203ENST00000492361 IGHV1OR15-1A0A075B7D0 117 aa11.35□□□□□ -0.59
TNFRSF1B-203ENST00000492361 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
TNFRSF1B-203ENST00000492361 UFSP1Q6NVU6 142 aa11.35□□□□□ -0.59
TNFRSF1B-203ENST00000492361 NEXN-AS1Q8NBZ9 246 aa11.35□□□□□ -0.59
TNFRSF1B-203ENST00000492361 CFHR3Q02985 330 aa11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 C20orf78Q9BR46 151 aa11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 Q9UF83 564 aa11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 NIPBLQ6KC79 2804 aaeCLIP11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 IGKV2-29A2NJV5 120 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 FOXI2Q6ZQN5 318 aa11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 COX8CQ7Z4L0 72 aa11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 RRN3P1Q2M238 152 aa11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 DAND5Q8N907 189 aa11.34□□□□□ -0.59
TNFRSF1B-203ENST00000492361 TRAV8-3A0A0A6YYJ7 113 aa11.33□□□□□ -0.6
TNFRSF1B-203ENST00000492361 AZU1P20160 251 aa11.33□□□□□ -0.6
TNFRSF1B-203ENST00000492361 USP24Q9UPU5 2620 aa11.33□□□□□ -0.6
TNFRSF1B-203ENST00000492361 G3V4G9 280 aa11.33□□□□□ -0.6
TNFRSF1B-203ENST00000492361 J3QQQ9 107 aa11.32□□□□□ -0.6
TNFRSF1B-203ENST00000492361 SRSF2Q01130 221 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1B-203ENST00000492361 PPP1R17O96001 155 aa11.31□□□□□ -0.6
TNFRSF1B-203ENST00000492361 Q5PR19 223 aa11.31□□□□□ -0.6
TNFRSF1B-203ENST00000492361 PSMG3-AS1Q96PY0 264 aa11.31□□□□□ -0.6
TNFRSF1B-203ENST00000492361 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
TNFRSF1B-203ENST00000492361 LENEPQ9Y5L5 61 aa11.31□□□□□ -0.6
TNFRSF1B-203ENST00000492361 KRTAP10-9P60411 292 aa11.31□□□□□ -0.6
TNFRSF1B-203ENST00000492361 HIGD1BQ9P298 99 aa11.31□□□□□ -0.6
TNFRSF1B-203ENST00000492361 DCANP1Q8TF63 244 aa11.31□□□□□ -0.6
TNFRSF1B-203ENST00000492361 SOCS3O14543 225 aa11.3□□□□□ -0.6
TNFRSF1B-203ENST00000492361 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
TNFRSF1B-203ENST00000492361 LINC01356Q8N9X3 169 aa11.3□□□□□ -0.6
TNFRSF1B-203ENST00000492361 ZNRF2Q8NHG8 242 aa11.3□□□□□ -0.6
TNFRSF1B-203ENST00000492361 GEMIN7Q9H840 131 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1B-203ENST00000492361 A0A0J9YX75 114 aa11.29□□□□□ -0.6
TNFRSF1B-203ENST00000492361 SIGMAR1Q99720 223 aa11.29□□□□□ -0.6
TNFRSF1B-203ENST00000492361 TM2D2Q9BX73 214 aa11.29□□□□□ -0.6
TNFRSF1B-203ENST00000492361 GCN1Q92616 2671 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1B-203ENST00000492361 E9PLD3 99 aa11.29□□□□□ -0.6
TNFRSF1B-203ENST00000492361 SPINK8P0C7L1 97 aa11.29□□□□□ -0.6
TNFRSF1B-203ENST00000492361 SPAG8Q99932 426 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1B-203ENST00000492361 CIDEAO60543 219 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 TMEM61Q8N0U2 210 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 A4D1N5 150 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 C9JAW5 83 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 TRGV1A0A0A0MS02 117 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 TRAV13-1A0A0B4J241 112 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 NDUFS8O00217 210 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 TSHBP01222 138 aa11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 DLX4Q92988 240 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1B-203ENST00000492361 PRORYQ9H606 182 aa11.27□□□□□ -0.6
TNFRSF1B-203ENST00000492361 CRYGDP07320 174 aa11.27□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TRPT1Q86TN4 253 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TMEM238C9JI98 176 aa11.27□□□□□ -0.61
TNFRSF1B-203ENST00000492361 Q96MF0 132 aa11.26□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TRAV12-1A0A0B4J245 112 aa11.26□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TRBV7-3A0A075B6L6 115 aa11.26□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TSPAN13O95857 204 aa11.26□□□□□ -0.61
TNFRSF1B-203ENST00000492361 RPL35AP18077 110 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1B-203ENST00000492361 PSMB8P28062 276 aa11.25□□□□□ -0.61
TNFRSF1B-203ENST00000492361 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
TNFRSF1B-203ENST00000492361 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
TNFRSF1B-203ENST00000492361 I3L3M4 83 aa11.25□□□□□ -0.61
TNFRSF1B-203ENST00000492361 IGLV1-40P01703 118 aa11.25□□□□□ -0.61
TNFRSF1B-203ENST00000492361 Q6ZSV7 163 aa11.25□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
TNFRSF1B-203ENST00000492361 KLLNB2CW77 178 aa11.24□□□□□ -0.61
TNFRSF1B-203ENST00000492361 M0QY20 66 aa11.24□□□□□ -0.61
TNFRSF1B-203ENST00000492361 F8W1H4 67 aa11.24□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
TNFRSF1B-203ENST00000492361 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1B-203ENST00000492361 ERG28Q9UKR5 140 aa11.24□□□□□ -0.61
TNFRSF1B-203ENST00000492361 A0A0J9YY99 117 aa11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 POLR2KP53803 58 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 K7EQG2 157 aa11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 VPREB3Q9UKI3 123 aa11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 HELZ2Q9BYK8 2649 aaKnown RBP11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 IGLV4-69A0A075B6H9 119 aa11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 A0A1B0GV72 72 aa11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 LINC00315P59091 139 aa11.23□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TRGV11A0A075B6L2 103 aa11.22□□□□□ -0.61
TNFRSF1B-203ENST00000492361 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
TNFRSF1B-203ENST00000492361 IGIPA6NJ69 53 aa11.22□□□□□ -0.61
TNFRSF1B-203ENST00000492361 TCL1BO95988 128 aa11.22□□□□□ -0.61
TNFRSF1B-203ENST00000492361 PRO1854Q9UHT4 67 aa11.22□□□□□ -0.61
TNFRSF1B-203ENST00000492361 CRIP2P52943 208 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1B-203ENST00000492361 STHQ8IWL8 128 aa11.21□□□□□ -0.61
TNFRSF1B-203ENST00000492361 C11orf68Q9H3H3 251 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1B-203ENST00000492361 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.62
TNFRSF1B-203ENST00000492361 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms