RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 CIDEAO60543 219 aa7.36□□□□□ -1.23
CLCNKA-206ENST00000491433 FOXA3P55318 350 aaPredicted RBP7.36□□□□□ -1.23
CLCNKA-206ENST00000491433 KRTAP10-4P60372 401 aaPredicted RBP7.36□□□□□ -1.23
CLCNKA-206ENST00000491433 SMUG1Q53HV7 270 aa7.36□□□□□ -1.23
CLCNKA-206ENST00000491433 Q6AWC8 147 aa7.36□□□□□ -1.23
CLCNKA-206ENST00000491433 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 FAM231BA6NCW3 169 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 FABP5P3A8MUU1 101 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 SCO1O75880 301 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 IGHV3-30P01768 117 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 IGHV3-33P01772 117 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 IGHV3-30-3P0DP02 117 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 IGHV3-30-5P0DP03 117 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 PRR9Q5T870 116 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 FAM159AQ6UWV7 190 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 Q8N976 141 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 RMI2Q96E14 147 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 PRADC1Q9BSG0 188 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 NDFIP1Q9BT67 221 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 RNASE7Q9H1E1 156 aaKnown RBP7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 SMCO4Q9NRQ5 59 aa7.35□□□□□ -1.23
CLCNKA-206ENST00000491433 A0A0U1RQV1 116 aa7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 SMIM27A0A1W2PRY6 76 aa7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 MGST1P10620 155 aaKnown RBP7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 DNLZQ5SXM8 178 aa7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 ATP6V0E2Q8NHE4 81 aa7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 CIRBP-AS1Q8TBR5 109 aa7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 GFRA4Q9GZZ7 299 aa7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 IL36BQ9NZH7 164 aa7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 C11orf21Q9P2W6 132 aa7.34□□□□□ -1.23
CLCNKA-206ENST00000491433 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 COLCA2A8K830 154 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 M0R2P5 195 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 GATCO43716 136 aaKnown RBP7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 SH2D1AO60880 128 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 CXCL1P09341 107 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 ELOBQ15370 118 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 LINC01559Q495D7 138 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 FAM162BQ5T6X4 162 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 C15orf54Q8N8G6 183 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 FAT3Q8TDW7 4589 aa7.33□□□□□ -1.24
CLCNKA-206ENST00000491433 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 LOC100131303A0A0U1RQF7 123 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 WFDC2Q14508 124 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 RHOHQ15669 191 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 MUC21Q5SSG8 566 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 Q6ZQT7 251 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 CBLN2Q8IUK8 224 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 TSKUQ8WUA8 353 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 GTSF1LQ9H1H1 148 aa7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 RPP21Q9H633 154 aaKnown RBP7.32□□□□□ -1.24
CLCNKA-206ENST00000491433 TRAV21A0A0B4J279 112 aa7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 TRBV6-4A0A1B0GX49 114 aa7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 A8MWL6 223 aa7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 LECT2O14960 151 aa7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 P01737 135 aa7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 PRR27Q6MZM9 219 aa7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 DAZAP1Q96EP5 407 aaKnown RBP7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 SSBP4Q9BWG4 385 aaPredicted RBP7.31□□□□□ -1.24
CLCNKA-206ENST00000491433 FSIP2Q5CZC0 6907 aa7.3□□□□□ -1.24
CLCNKA-206ENST00000491433 TYMSP04818 313 aa7.3□□□□□ -1.24
CLCNKA-206ENST00000491433 RPS20P60866 119 aaKnown RBP7.3□□□□□ -1.24
CLCNKA-206ENST00000491433 DNAH8Q96JB1 4490 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 RPL19P84098 196 aaKnown RBP7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 LINC01620Q4KN68 170 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 C14orf177Q52M58 125 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 WDR73Q6P4I2 378 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 Q6ZRU5 148 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 SLC25A29Q8N8R3 303 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 NUP35Q8NFH5 326 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 OR2D3Q8NGH3 330 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 BAALCQ8WXS3 180 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 KCNS1Q96KK3 526 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
CLCNKA-206ENST00000491433 IGHV3-16A0A0C4DH30 117 aa7.28□□□□□ -1.24
CLCNKA-206ENST00000491433 SNAI2O43623 268 aa7.28□□□□□ -1.24
CLCNKA-206ENST00000491433 KCNIP4Q6PIL6 250 aa7.28□□□□□ -1.24
CLCNKA-206ENST00000491433 GATD1Q8NB37 220 aa7.28□□□□□ -1.24
CLCNKA-206ENST00000491433 BTF3L4Q96K17 158 aa7.28□□□□□ -1.24
CLCNKA-206ENST00000491433 NAT8BQ9UHF3 227 aa7.28□□□□□ -1.24
CLCNKA-206ENST00000491433 URGCP-MRPS24S4R325 110 aa7.28□□□□□ -1.24
CLCNKA-206ENST00000491433 A0A1B0GXF2 115 aa7.27□□□□□ -1.25
CLCNKA-206ENST00000491433 HIGD1CA8MV81 97 aa7.27□□□□□ -1.25
CLCNKA-206ENST00000491433 OR5AL1P0C617 328 aa7.27□□□□□ -1.25
CLCNKA-206ENST00000491433 S100PP25815 95 aa7.27□□□□□ -1.25
CLCNKA-206ENST00000491433 CTRLP40313 264 aa7.27□□□□□ -1.25
CLCNKA-206ENST00000491433 RASL11AQ6T310 242 aa7.27□□□□□ -1.25
CLCNKA-206ENST00000491433 NAGKQ9UJ70 344 aa7.27□□□□□ -1.25
CLCNKA-206ENST00000491433 IGKV2D-24A0A075B6R9 120 aa7.26□□□□□ -1.25
CLCNKA-206ENST00000491433 TGIF2-C20orf24A0A0A6YYL0 155 aa7.26□□□□□ -1.25
CLCNKA-206ENST00000491433 XKRY2A2RUG3 117 aa7.26□□□□□ -1.25
CLCNKA-206ENST00000491433 PHOX2AO14813 284 aa7.26□□□□□ -1.25
CLCNKA-206ENST00000491433 GZMBP10144 247 aa7.26□□□□□ -1.25
CLCNKA-206ENST00000491433 RNASE3P12724 160 aaKnown RBP7.26□□□□□ -1.25
CLCNKA-206ENST00000491433 F2Z2F3 143 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms