RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TEX29Q8N6K0 151 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 ZFAND2AQ8N6M9 145 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 C14orf178Q8N769 122 aaPredicted RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 KLHL30-AS1Q8NEE0 82 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 ZNF418Q8TF45 676 aaPredicted RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 ITLN2Q8WWU7 325 aaPredicted RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 BAALCQ8WXS3 180 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 PTH2Q96A98 100 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 PLEKHB2Q96CS7 222 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 ODF3Q96PU9 254 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TIMM17AQ99595 171 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 SMIM2Q9BVW6 85 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 GTSF1LQ9H1H1 148 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 MRPL16Q9NX20 251 aaKnown RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 SPANXCQ9NY87 97 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 PRO0461Q9UI25 63 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TSSC4Q9Y5U2 329 aaPredicted RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 S4R3C0 116 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 NAV3Q8IVL0 2385 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 CFAP54Q96N23 3096 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 CNOT1A5YKK6 2376 aaKnown RBP1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 ROS1P08922 2347 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 ABCA4P78363 2273 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV4-61A0A0C4DH41 118 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 A0A0J9YXY3 114 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 TMEM223A0PJW6 202 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 SDHAF1A6NFY7 115 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 ZNF815PA8K554 130 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 KLLNB2CW77 178 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 G3V318 75 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 J3QQQ9 107 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 M0QY20 66 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 M0R2P5 195 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 ATP6V0E1O15342 81 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 NXPH4O95158 308 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV1-69P01742 117 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-30P01768 117 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV4-59P01825 116 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 ACYP1P07311 99 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-30-5P0DP03 117 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 RNASE3P12724 160 aaKnown RBP1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 IFITM1P13164 125 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 COX6B1P14854 86 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 LGALS3P17931 250 aaKnown RBP1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 CMC4P56277 68 aaPredicted RBP1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 KRTAP10-3P60369 221 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 PRB3Q04118 309 aaPredicted RBP1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 GAGE2BQ13066 116 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 KLRD1Q13241 179 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 RHOHQ15669 191 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 GAGE2EQ4V326 116 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 DEFB121Q5J5C9 76 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 TMEM170BQ5T4T1 132 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 LCE3CQ5T5A8 94 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 MUSTN1Q8IVN3 82 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 RNF182Q8N6D2 247 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 ANKRD29Q8N6D5 301 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 C5orf56Q8N8D9 126 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 Q8TAT8 98 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 COPS9Q8WXC6 57 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 DNAJC30Q96LL9 226 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 CARD19Q96LW7 228 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 NAA38Q9BRA0 125 aaKnown RBP1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 PRADC1Q9BSG0 188 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 RHPN1-AS1Q9BWJ2 59 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 TTTY13Q9BZ97 58 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 IMUPQ9GZP8 106 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 GEMIN7Q9H840 131 aaKnown RBP1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 EDA2RQ9HAV5 297 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 YAE1D1Q9NRH1 226 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 GAGE2DQ9UEU5 116 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 SH3BGRL2Q9UJC5 107 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 UFC1Q9Y3C8 167 aa1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 DSPP15924 2871 aaKnown RBP1.49□□□□□ -2.17
SNRNP40-207ENST00000491106 XIRP2A4UGR9 3374 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 MED13LQ71F56 2210 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 LAMA3Q16787 3333 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 RANBP2P49792 3224 aaKnown RBP1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV1OR15-1A0A075B7D0 117 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3OR16-13A0A075B7E8 117 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 A0A087X002 238 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-74A0A0B4J1X5 117 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 TRAV26-2A0A0B4J265 109 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 A0A0B4J2C4 111 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-35A0A0C4DH35 117 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-66A0A0C4DH42 116 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 TRBV10-2A0A0K0K1G8 114 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 A4D1N5 150 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 A6NDX4 124 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 H3BVH4 76 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 SOCS3O14543 225 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 SLC25A20O43772 301 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 TIMM17BO60830 172 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 TCL1BO95988 128 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-33P01772 117 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 SAA4P35542 130 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 SNRPD3P62318 126 aaKnown RBP1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 MRPS36P82909 103 aaKnown RBP1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 NDPQ00604 133 aa1.48□□□□□ -2.17
SNRNP40-207ENST00000491106 ATXN8Q156A1 80 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms