RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
CACNA1C-227ENST00000491104 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.22
CACNA1C-227ENST00000491104 TRAV9-1A0A075B6T8 112 aa7.45□□□□□ -1.22
CACNA1C-227ENST00000491104 S100A8P05109 93 aa7.45□□□□□ -1.22
CACNA1C-227ENST00000491104 RPS10P46783 165 aaKnown RBP7.45□□□□□ -1.22
CACNA1C-227ENST00000491104 ELOBQ15370 118 aa7.45□□□□□ -1.22
CACNA1C-227ENST00000491104 MRPL23Q16540 153 aaKnown RBP7.45□□□□□ -1.22
CACNA1C-227ENST00000491104 MRPL51Q4U2R6 128 aaKnown RBP7.45□□□□□ -1.22
CACNA1C-227ENST00000491104 RASL11AQ6T310 242 aa7.45□□□□□ -1.22
CACNA1C-227ENST00000491104 IGHV3-38A0A0C4DH36 116 aa7.44□□□□□ -1.22
CACNA1C-227ENST00000491104 TRBV10-1A0A0K0K1A3 114 aa7.44□□□□□ -1.22
CACNA1C-227ENST00000491104 TCTAP57738 103 aa7.44□□□□□ -1.22
CACNA1C-227ENST00000491104 RPL36AP83881 106 aaKnown RBP7.44□□□□□ -1.22
CACNA1C-227ENST00000491104 ESRGQ1W209 222 aa7.44□□□□□ -1.22
CACNA1C-227ENST00000491104 TMEM136Q6ZRR5 245 aa7.44□□□□□ -1.22
CACNA1C-227ENST00000491104 NEGR1Q7Z3B1 354 aa7.44□□□□□ -1.22
CACNA1C-227ENST00000491104 RPL36ALQ969Q0 106 aaKnown RBP7.44□□□□□ -1.22
CACNA1C-227ENST00000491104 D6R8Y8 96 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 H7C1H1 209 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 UBE2D3P61077 147 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 UBE2D2P62837 147 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 UBE2DNLQ8IWF7 75 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 ATP6V0E2Q8NHE4 81 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 DEFB104AQ8WTQ1 72 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 MRAP2Q96G30 205 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 YPEL4Q96NS1 127 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
CACNA1C-227ENST00000491104 TRBV7-3A0A075B6L6 115 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 KIAA1644Q3SXP7 199 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 OR10J3Q5JRS4 329 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 LINC00476Q8WZB0 136 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 NIT2Q9NQR4 276 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 SMCO4Q9NRQ5 59 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 TNFRSF18Q9Y5U5 241 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 SACSQ9NZJ4 4579 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 DNAH1Q9P2D7 4330 aa7.42□□□□□ -1.22
CACNA1C-227ENST00000491104 VPS13DQ5THJ4 4388 aa7.41□□□□□ -1.22
CACNA1C-227ENST00000491104 TRBV24-1A0A075B6N3 115 aa7.41□□□□□ -1.22
CACNA1C-227ENST00000491104 LY6G6CO95867 125 aa7.41□□□□□ -1.22
CACNA1C-227ENST00000491104 CKS2P33552 79 aa7.41□□□□□ -1.22
CACNA1C-227ENST00000491104 CCL18P55774 89 aa7.41□□□□□ -1.22
CACNA1C-227ENST00000491104 NRACQ8N912 160 aa7.41□□□□□ -1.22
CACNA1C-227ENST00000491104 DNAJC30Q96LL9 226 aa7.41□□□□□ -1.22
CACNA1C-227ENST00000491104 NPYP01303 97 aa7.4□□□□□ -1.22
CACNA1C-227ENST00000491104 HLA-DQA1P01909 254 aa7.4□□□□□ -1.22
CACNA1C-227ENST00000491104 LGALS9CQ6DKI2 356 aa7.4□□□□□ -1.22
CACNA1C-227ENST00000491104 GTSF1LQ9H1H1 148 aa7.4□□□□□ -1.22
CACNA1C-227ENST00000491104 HYDINQ4G0P3 5121 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 APCSP02743 223 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 S100A1P23297 94 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 SH2D6Q7Z4S9 175 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 WFDC10BQ8IUB3 73 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 FRZBQ92765 325 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 GNB1LQ9BYB4 327 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 MRPL18Q9H0U6 180 aaKnown RBP7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 ST20Q9HBF5 79 aa7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 MRPS16Q9Y3D3 137 aaKnown RBP7.39□□□□□ -1.23
CACNA1C-227ENST00000491104 TRBV6-5A0A0K0K1A5 114 aa7.38□□□□□ -1.23
CACNA1C-227ENST00000491104 FABP9Q0Z7S8 132 aa7.38□□□□□ -1.23
CACNA1C-227ENST00000491104 COX19Q49B96 90 aa7.38□□□□□ -1.23
CACNA1C-227ENST00000491104 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
CACNA1C-227ENST00000491104 ORMDL3Q8N138 153 aa7.38□□□□□ -1.23
CACNA1C-227ENST00000491104 PRELID3AQ96N28 172 aa7.38□□□□□ -1.23
CACNA1C-227ENST00000491104 LYSTQ99698 3801 aa7.38□□□□□ -1.23
CACNA1C-227ENST00000491104 TRAPPC1Q9Y5R8 145 aa7.38□□□□□ -1.23
CACNA1C-227ENST00000491104 LCE6AA0A183 80 aa7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 MT-ND6P03923 174 aa7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 TIRAPP58753 221 aa7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 SUMO2P61956 95 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 LELP1Q5T871 98 aa7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 DAZ4Q86SG3 579 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 TMEM70Q9BUB7 260 aa7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 DAZ3Q9NR90 486 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 RYR2Q92736 4967 aa7.37□□□□□ -1.23
CACNA1C-227ENST00000491104 IGLV2-18A0A075B6J9 118 aa7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 LOC389332A0A1B0GUA5 103 aa7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 COLCA2A8K830 154 aa7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 PPBPP02775 128 aa7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 PMCHP20382 165 aa7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 POLR2KP53803 58 aaKnown RBP7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 Q8N3U1 123 aa7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 UPK3BQ9BT76 320 aa7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 DNAH6Q9C0G6 4158 aa7.36□□□□□ -1.23
CACNA1C-227ENST00000491104 TRBV6-8A0A0A6YYG3 113 aa7.35□□□□□ -1.23
CACNA1C-227ENST00000491104 PPP1R17O96001 155 aa7.35□□□□□ -1.23
CACNA1C-227ENST00000491104 TSHBP01222 138 aa7.35□□□□□ -1.23
CACNA1C-227ENST00000491104 COTL1Q14019 142 aa7.35□□□□□ -1.23
CACNA1C-227ENST00000491104 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
CACNA1C-227ENST00000491104 SMIM2Q9BVW6 85 aa7.35□□□□□ -1.23
CACNA1C-227ENST00000491104 TRAV8-6A0A0B4J262 113 aa7.34□□□□□ -1.23
CACNA1C-227ENST00000491104 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
CACNA1C-227ENST00000491104 TRBV27A0A0K0K1C4 114 aa7.34□□□□□ -1.23
CACNA1C-227ENST00000491104 I3L3M4 83 aa7.34□□□□□ -1.23
CACNA1C-227ENST00000491104 M0R2N4 97 aa7.34□□□□□ -1.23
CACNA1C-227ENST00000491104 PHOX2AO14813 284 aa7.34□□□□□ -1.23
CACNA1C-227ENST00000491104 IGHV3-30P01768 117 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms