RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 ETDBQ3ZM63 59 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 C9orf47Q6ZRZ4 202 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 OVOL1O14753 267 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 ARMS2P0C7Q2 107 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 PRR9Q5T870 116 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 OR8A1Q8NGG7 326 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 RETNQ9HD89 108 aa7.56□□□□□ -1.2
HDAC9-225ENST00000490851 ATRQ13535 2644 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 SYS1-DBNDD2H3BUS1 97 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 APCSP02743 223 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 HBBP68871 147 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 KIR3DS1Q14943 382 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 NSUN5P1Q3KNT7 163 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 SAMD5Q5TGI4 173 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 BORCS7Q96B45 105 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 C16orf95Q9H693 158 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 AGRNO00468 2067 aa7.55□□□□□ -1.2
HDAC9-225ENST00000490851 MT-ND6P03923 174 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 NMUP48645 174 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 DYNLRB2Q8TF09 96 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 PRELID3AQ96N28 172 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 PEMTQ9UBM1 199 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 A0A1B0GXF2 115 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 F2Z2F3 143 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 CCL24O00175 119 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 HLA-DQA1P01909 254 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 SNRPD3P62318 126 aaKnown RBP7.54□□□□□ -1.2
HDAC9-225ENST00000490851 LYZL1Q6UWQ5 148 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 COX8CQ7Z4L0 72 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 KIR2DL4Q99706 377 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 JPT2Q9H910 190 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 C11orf21Q9P2W6 132 aa7.54□□□□□ -1.2
HDAC9-225ENST00000490851 K7EQG2 157 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 ZNF324O75467 553 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-225ENST00000490851 APOMO95445 188 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 GCSHP23434 173 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
HDAC9-225ENST00000490851 HERVK_113P63121 156 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 TRPT1Q86TN4 253 aaKnown RBP7.53□□□□□ -1.2
HDAC9-225ENST00000490851 IL17DQ8TAD2 202 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 SCRT2Q9NQ03 307 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 A0A1B0GUT8 65 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 SH2D6Q7Z4S9 175 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 TMEM61Q8N0U2 210 aa7.53□□□□□ -1.2
HDAC9-225ENST00000490851 TIMM8BQ9Y5J9 83 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-225ENST00000490851 H3BMG7 143 aa7.52□□□□□ -1.2
HDAC9-225ENST00000490851 PRO0461Q9UI25 63 aa7.52□□□□□ -1.2
HDAC9-225ENST00000490851 VWFP04275 2813 aa7.52□□□□□ -1.21
HDAC9-225ENST00000490851 IGKV3D-20A0A0C4DH25 116 aa7.52□□□□□ -1.21
HDAC9-225ENST00000490851 ASIPP42127 132 aa7.52□□□□□ -1.21
HDAC9-225ENST00000490851 INSL3P51460 131 aa7.52□□□□□ -1.21
HDAC9-225ENST00000490851 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-225ENST00000490851 FHL3Q13643 280 aa7.52□□□□□ -1.21
HDAC9-225ENST00000490851 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
HDAC9-225ENST00000490851 PLEKHB2Q96CS7 222 aa7.52□□□□□ -1.21
HDAC9-225ENST00000490851 NOTCH3Q9UM47 2321 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 FAM236DA0A1B0GTK5 79 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 FAM236CP0DP71 79 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 PROK1P58294 105 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 CD164Q04900 197 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 ZNF575Q86XF7 245 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 SNCGO76070 127 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 RIGQ13278 110 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 LINC01559Q495D7 138 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 GAGE13Q4V321 117 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 C9orf85Q96MD7 179 aa7.51□□□□□ -1.21
HDAC9-225ENST00000490851 KNCNA6PVL3 124 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 SPRY2O43597 315 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 OXTP01178 125 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 DEFB131AP59861 70 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 KRTAP10-3P60369 221 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 TWIST1Q15672 202 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 EBLN2Q6P2I7 272 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 C2orf91Q6ZV80 131 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 TRAV12-2A0A075B6T6 113 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 A0A0J9YX75 114 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 DUSP14O95147 198 aaKnown RBP7.5□□□□□ -1.21
HDAC9-225ENST00000490851 DEFB114Q30KQ6 69 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 MSRB1Q9NZV6 116 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 LENEPQ9Y5L5 61 aa7.5□□□□□ -1.21
HDAC9-225ENST00000490851 CRXO43186 299 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-225ENST00000490851 FXYD7P58549 80 aa7.49□□□□□ -1.21
HDAC9-225ENST00000490851 PPDPFLQ8WWR9 84 aa7.49□□□□□ -1.21
HDAC9-225ENST00000490851 TRAV12-3A0A0B4J271 114 aa7.49□□□□□ -1.21
HDAC9-225ENST00000490851 TRAV21A0A0B4J279 112 aa7.49□□□□□ -1.21
HDAC9-225ENST00000490851 H3BVH4 76 aa7.49□□□□□ -1.21
HDAC9-225ENST00000490851 SPINK13Q1W4C9 94 aa7.49□□□□□ -1.21
HDAC9-225ENST00000490851 FAM19A4Q96LR4 140 aa7.49□□□□□ -1.21
HDAC9-225ENST00000490851 TMEM191AQ9H0A3 160 aa7.49□□□□□ -1.21
HDAC9-225ENST00000490851 ADARB2-AS1A8MUL3 147 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 M0R2P5 195 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 COX8AP10176 69 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 LEPP41159 167 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 AMTNQ6UX39 209 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 C3orf22Q8N5N4 141 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms