RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 Q9HAA7 133 aa10.15□□□□□ -0.78
COL27A1-206ENST00000490831 DAZ3Q9NR90 486 aaKnown RBP10.15□□□□□ -0.78
COL27A1-206ENST00000490831 TRBV6-8A0A0A6YYG3 113 aa10.14□□□□□ -0.79
COL27A1-206ENST00000490831 F5H697 171 aa10.14□□□□□ -0.79
COL27A1-206ENST00000490831 PSCAO43653 123 aa10.14□□□□□ -0.79
COL27A1-206ENST00000490831 SSTP61278 116 aa10.14□□□□□ -0.79
COL27A1-206ENST00000490831 TM2D2Q9BX73 214 aa10.14□□□□□ -0.79
COL27A1-206ENST00000490831 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
COL27A1-206ENST00000490831 M0QY20 66 aa10.13□□□□□ -0.79
COL27A1-206ENST00000490831 FAM210AQ96ND0 272 aa10.13□□□□□ -0.79
COL27A1-206ENST00000490831 KRTAP17-1Q9BYP8 105 aa10.13□□□□□ -0.79
COL27A1-206ENST00000490831 RNASE7Q9H1E1 156 aaKnown RBP10.13□□□□□ -0.79
COL27A1-206ENST00000490831 TRGC1P0CF51 173 aa10.12□□□□□ -0.79
COL27A1-206ENST00000490831 NTF3P20783 257 aa10.12□□□□□ -0.79
COL27A1-206ENST00000490831 FUSP35637 526 aaKnown RBP eCLIP10.12□□□□□ -0.79
COL27A1-206ENST00000490831 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
COL27A1-206ENST00000490831 FAM231DQ6ZW35 169 aa10.12□□□□□ -0.79
COL27A1-206ENST00000490831 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-206ENST00000490831 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
COL27A1-206ENST00000490831 URGCP-MRPS24S4R325 110 aa10.12□□□□□ -0.79
COL27A1-206ENST00000490831 ABCA13Q86UQ4 5058 aa10.12□□□□□ -0.79
COL27A1-206ENST00000490831 H7C1H1 209 aa10.11□□□□□ -0.79
COL27A1-206ENST00000490831 SUMO4Q6EEV6 95 aa10.11□□□□□ -0.79
COL27A1-206ENST00000490831 NTN5Q8WTR8 489 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-206ENST00000490831 COX11Q9Y6N1 276 aa10.11□□□□□ -0.79
COL27A1-206ENST00000490831 A0A087WX48 190 aa10.1□□□□□ -0.79
COL27A1-206ENST00000490831 ELOBQ15370 118 aa10.1□□□□□ -0.79
COL27A1-206ENST00000490831 ATRAIDQ6UW56 229 aa10.1□□□□□ -0.79
COL27A1-206ENST00000490831 NTM-AS1Q6ZSK4 140 aa10.1□□□□□ -0.79
COL27A1-206ENST00000490831 Q8N814 137 aa10.1□□□□□ -0.79
COL27A1-206ENST00000490831 GTSF1Q8WW33 167 aa10.1□□□□□ -0.79
COL27A1-206ENST00000490831 EIF5A2Q9GZV4 153 aaKnown RBP10.1□□□□□ -0.79
COL27A1-206ENST00000490831 DPH3P1Q9H4G8 78 aa10.1□□□□□ -0.79
COL27A1-206ENST00000490831 MGPP08493 103 aa10.09□□□□□ -0.79
COL27A1-206ENST00000490831 PKIAP61925 76 aa10.09□□□□□ -0.79
COL27A1-206ENST00000490831 CT83Q5H943 113 aa10.09□□□□□ -0.79
COL27A1-206ENST00000490831 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
COL27A1-206ENST00000490831 KLK12Q9UKR0 248 aa10.09□□□□□ -0.79
COL27A1-206ENST00000490831 GATCO43716 136 aaKnown RBP10.08□□□□□ -0.8
COL27A1-206ENST00000490831 SRP19P09132 144 aaKnown RBP10.08□□□□□ -0.8
COL27A1-206ENST00000490831 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
COL27A1-206ENST00000490831 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
COL27A1-206ENST00000490831 KCNIP4Q6PIL6 250 aa10.08□□□□□ -0.8
COL27A1-206ENST00000490831 RASL11AQ6T310 242 aa10.08□□□□□ -0.8
COL27A1-206ENST00000490831 LINC01551Q86U37 167 aa10.08□□□□□ -0.8
COL27A1-206ENST00000490831 MAPKAPK5-AS1Q8N8E1 139 aa10.08□□□□□ -0.8
COL27A1-206ENST00000490831 RMI2Q96E14 147 aa10.08□□□□□ -0.8
COL27A1-206ENST00000490831 SMIM7Q9BQ49 75 aa10.08□□□□□ -0.8
COL27A1-206ENST00000490831 A8MWL6 223 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 GCSHP23434 173 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 CEBPGP53567 150 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 Q0VG73 95 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 WFDC2Q14508 124 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 TWIST1Q15672 202 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 IQCJQ1A5X6 159 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 Q8N1X5 172 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 NIT2Q9NQR4 276 aa10.07□□□□□ -0.8
COL27A1-206ENST00000490831 IGLV5-52A0A0A0MRZ9 124 aa10.06□□□□□ -0.8
COL27A1-206ENST00000490831 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
COL27A1-206ENST00000490831 XGP55808 180 aa10.06□□□□□ -0.8
COL27A1-206ENST00000490831 FRZBQ92765 325 aa10.06□□□□□ -0.8
COL27A1-206ENST00000490831 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
COL27A1-206ENST00000490831 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
COL27A1-206ENST00000490831 TRBV25-1A0A075B6N4 114 aa10.05□□□□□ -0.8
COL27A1-206ENST00000490831 ZNF727A8MUV8 499 aa10.05□□□□□ -0.8
COL27A1-206ENST00000490831 TEX261Q6UWH6 196 aa10.05□□□□□ -0.8
COL27A1-206ENST00000490831 ENHOQ6UWT2 76 aa10.05□□□□□ -0.8
COL27A1-206ENST00000490831 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
COL27A1-206ENST00000490831 IGHV1-24A0A0C4DH33 117 aa10.04□□□□□ -0.8
COL27A1-206ENST00000490831 GFRA4Q9GZZ7 299 aa10.04□□□□□ -0.8
COL27A1-206ENST00000490831 OSTCQ9NRP0 149 aa10.04□□□□□ -0.8
COL27A1-206ENST00000490831 PRR34Q9NV39 138 aa10.04□□□□□ -0.8
COL27A1-206ENST00000490831 IGKV2D-24A0A075B6R9 120 aa10.03□□□□□ -0.8
COL27A1-206ENST00000490831 FAM231BA6NCW3 169 aa10.03□□□□□ -0.8
COL27A1-206ENST00000490831 FAM74A3Q4VXF1 159 aa10.03□□□□□ -0.8
COL27A1-206ENST00000490831 C15orf54Q8N8G6 183 aa10.03□□□□□ -0.8
COL27A1-206ENST00000490831 GATD1Q8NB37 220 aa10.03□□□□□ -0.8
COL27A1-206ENST00000490831 TSKUQ8WUA8 353 aa10.03□□□□□ -0.8
COL27A1-206ENST00000490831 DNAH8Q96JB1 4490 aa10.02□□□□□ -0.8
COL27A1-206ENST00000490831 ANGP03950 147 aaKnown RBP10.02□□□□□ -0.81
COL27A1-206ENST00000490831 RBX1P62877 108 aa10.02□□□□□ -0.81
COL27A1-206ENST00000490831 SMIM15Q7Z3B0 74 aa10.02□□□□□ -0.81
COL27A1-206ENST00000490831 Q8N976 141 aa10.02□□□□□ -0.81
COL27A1-206ENST00000490831 BAALCQ8WXS3 180 aa10.02□□□□□ -0.81
COL27A1-206ENST00000490831 TMEM70Q9BUB7 260 aa10.02□□□□□ -0.81
COL27A1-206ENST00000490831 SMDT1Q9H4I9 107 aa10.02□□□□□ -0.81
COL27A1-206ENST00000490831 C9JQL5 133 aa10.01□□□□□ -0.81
COL27A1-206ENST00000490831 GAGE6Q13070 117 aa10.01□□□□□ -0.81
COL27A1-206ENST00000490831 MIAQ16674 131 aa10.01□□□□□ -0.81
COL27A1-206ENST00000490831 C1orf43Q9BWL3 253 aa10.01□□□□□ -0.81
COL27A1-206ENST00000490831 V9GYV3 84 aa10.01□□□□□ -0.81
COL27A1-206ENST00000490831 FAT1Q14517 4588 aa10□□□□□ -0.81
COL27A1-206ENST00000490831 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
COL27A1-206ENST00000490831 A0A1B0GUV1 79 aa10□□□□□ -0.81
COL27A1-206ENST00000490831 HIGD1CA8MV81 97 aa10□□□□□ -0.81
COL27A1-206ENST00000490831 LECT2O14960 151 aa10□□□□□ -0.81
COL27A1-206ENST00000490831 CRPP02741 224 aa10□□□□□ -0.81
COL27A1-206ENST00000490831 TMEM241Q24JQ0 296 aa10□□□□□ -0.81
COL27A1-206ENST00000490831 ISOC2Q96AB3 205 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms