RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 A0A0D9SG52 128 aa12.92□□□□□ -0.34
SREBF1-216ENST00000490796 TMEM97Q5BJF2 176 aa12.92□□□□□ -0.34
SREBF1-216ENST00000490796 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
SREBF1-216ENST00000490796 TMUB2Q71RG4 321 aa12.92□□□□□ -0.34
SREBF1-216ENST00000490796 SNAI2O43623 268 aa12.91□□□□□ -0.34
SREBF1-216ENST00000490796 OR5AL1P0C617 328 aa12.91□□□□□ -0.34
SREBF1-216ENST00000490796 CHAC1Q9BUX1 264 aa12.91□□□□□ -0.34
SREBF1-216ENST00000490796 MLST8Q9BVC4 326 aa12.91□□□□□ -0.34
SREBF1-216ENST00000490796 BCL2L11O43521 198 aa12.9□□□□□ -0.34
SREBF1-216ENST00000490796 MPV17L2Q567V2 206 aa12.9□□□□□ -0.34
SREBF1-216ENST00000490796 AP1S3Q96PC3 154 aa12.9□□□□□ -0.34
SREBF1-216ENST00000490796 SSBP4Q9BWG4 385 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-216ENST00000490796 HMSDA8MTL9 139 aa12.89□□□□□ -0.35
SREBF1-216ENST00000490796 ENHOQ6UWT2 76 aa12.89□□□□□ -0.35
SREBF1-216ENST00000490796 HLA-DQA1P01909 254 aa12.88□□□□□ -0.35
SREBF1-216ENST00000490796 RPL35P42766 123 aaKnown RBP12.88□□□□□ -0.35
SREBF1-216ENST00000490796 MIAQ16674 131 aa12.88□□□□□ -0.35
SREBF1-216ENST00000490796 DAZAP1Q96EP5 407 aaKnown RBP12.88□□□□□ -0.35
SREBF1-216ENST00000490796 TPPP3Q9BW30 176 aa12.88□□□□□ -0.35
SREBF1-216ENST00000490796 DERL1Q9BUN8 251 aa12.87□□□□□ -0.35
SREBF1-216ENST00000490796 MANBALQ9NQG1 85 aa12.87□□□□□ -0.35
SREBF1-216ENST00000490796 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
SREBF1-216ENST00000490796 TRBV25-1A0A075B6N4 114 aa12.86□□□□□ -0.35
SREBF1-216ENST00000490796 MGPP08493 103 aa12.86□□□□□ -0.35
SREBF1-216ENST00000490796 CIRBP-AS1Q8TBR5 109 aa12.86□□□□□ -0.35
SREBF1-216ENST00000490796 USP17L23D6RBM5 183 aa12.85□□□□□ -0.35
SREBF1-216ENST00000490796 TEX46H3BTG2 121 aa12.85□□□□□ -0.35
SREBF1-216ENST00000490796 H7C1H1 209 aa12.85□□□□□ -0.35
SREBF1-216ENST00000490796 GAGE6Q13070 117 aa12.85□□□□□ -0.35
SREBF1-216ENST00000490796 KRTAP29-1A8MX34 341 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-216ENST00000490796 RPS20P60866 119 aaKnown RBP12.84□□□□□ -0.35
SREBF1-216ENST00000490796 VAX2Q9UIW0 290 aa12.84□□□□□ -0.35
SREBF1-216ENST00000490796 RBX1P62877 108 aa12.83□□□□□ -0.36
SREBF1-216ENST00000490796 CLPSL2Q6UWE3 100 aa12.83□□□□□ -0.36
SREBF1-216ENST00000490796 NTM-AS1Q6ZSK4 140 aa12.83□□□□□ -0.36
SREBF1-216ENST00000490796 FER1L6-AS1Q8NA97 138 aa12.83□□□□□ -0.36
SREBF1-216ENST00000490796 OR2D3Q8NGH3 330 aa12.83□□□□□ -0.36
SREBF1-216ENST00000490796 IGHV1-24A0A0C4DH33 117 aa12.82□□□□□ -0.36
SREBF1-216ENST00000490796 XKRY2A2RUG3 117 aa12.82□□□□□ -0.36
SREBF1-216ENST00000490796 IGLV2-8P01709 118 aa12.82□□□□□ -0.36
SREBF1-216ENST00000490796 CENPWQ5EE01 88 aa12.82□□□□□ -0.36
SREBF1-216ENST00000490796 EIF5AL1Q6IS14 154 aaKnown RBP12.82□□□□□ -0.36
SREBF1-216ENST00000490796 LINC00269Q8N2A0 174 aa12.82□□□□□ -0.36
SREBF1-216ENST00000490796 C11orf52Q96A22 123 aa12.82□□□□□ -0.36
SREBF1-216ENST00000490796 KIF25-AS1Q9Y6Z4 181 aa12.82□□□□□ -0.36
SREBF1-216ENST00000490796 GZMBP10144 247 aa12.81□□□□□ -0.36
SREBF1-216ENST00000490796 RAB5CP51148 216 aa12.81□□□□□ -0.36
SREBF1-216ENST00000490796 CACNG7P62955 275 aa12.81□□□□□ -0.36
SREBF1-216ENST00000490796 GNG4P50150 75 aa12.8□□□□□ -0.36
SREBF1-216ENST00000490796 CCL20P78556 96 aa12.8□□□□□ -0.36
SREBF1-216ENST00000490796 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
SREBF1-216ENST00000490796 IFNA1P01562 189 aa12.79□□□□□ -0.36
SREBF1-216ENST00000490796 PRSS1P07477 247 aa12.79□□□□□ -0.36
SREBF1-216ENST00000490796 IQCJQ1A5X6 159 aa12.79□□□□□ -0.36
SREBF1-216ENST00000490796 PRR34Q9NV39 138 aa12.79□□□□□ -0.36
SREBF1-216ENST00000490796 TRAV1-1A0A0B4J248 108 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 F2Z2F3 143 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 M0QY20 66 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 P01737 135 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 TRGC1P0CF51 173 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 IGLC6P0CF74 106 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 SMIM12Q96EX1 92 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 BIN3Q9NQY0 253 aa12.78□□□□□ -0.36
SREBF1-216ENST00000490796 RAB19A4D1S5 217 aa12.77□□□□□ -0.37
SREBF1-216ENST00000490796 PDE6DO43924 150 aa12.77□□□□□ -0.37
SREBF1-216ENST00000490796 NKX2-5P52952 324 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-216ENST00000490796 REG3AQ06141 175 aa12.77□□□□□ -0.37
SREBF1-216ENST00000490796 MED9Q9NWA0 146 aa12.77□□□□□ -0.37
SREBF1-216ENST00000490796 IGLV10-54A0A075B6I4 117 aa12.76□□□□□ -0.37
SREBF1-216ENST00000490796 RPL37AP61513 92 aaKnown RBP12.76□□□□□ -0.37
SREBF1-216ENST00000490796 RASL11AQ6T310 242 aa12.76□□□□□ -0.37
SREBF1-216ENST00000490796 C9orf163Q8N9P6 203 aa12.76□□□□□ -0.37
SREBF1-216ENST00000490796 CLRN3Q8NCR9 226 aa12.76□□□□□ -0.37
SREBF1-216ENST00000490796 TMEM243Q9BU79 118 aa12.76□□□□□ -0.37
SREBF1-216ENST00000490796 C19orf71A6NCJ1 209 aa12.75□□□□□ -0.37
SREBF1-216ENST00000490796 UBE2L6O14933 153 aa12.75□□□□□ -0.37
SREBF1-216ENST00000490796 MEF2BQ02080 365 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-216ENST00000490796 TRAV8-4A0A0B4J246 113 aa12.74□□□□□ -0.37
SREBF1-216ENST00000490796 OXTP01178 125 aa12.74□□□□□ -0.37
SREBF1-216ENST00000490796 LYZL1Q6UWQ5 148 aa12.74□□□□□ -0.37
SREBF1-216ENST00000490796 DPH3P1Q9H4G8 78 aa12.74□□□□□ -0.37
SREBF1-216ENST00000490796 NIT2Q9NQR4 276 aa12.73□□□□□ -0.37
SREBF1-216ENST00000490796 AP5S1Q9NUS5 200 aa12.73□□□□□ -0.37
SREBF1-216ENST00000490796 hDV102S1A0JD36 115 aa12.72□□□□□ -0.37
SREBF1-216ENST00000490796 NTF3P20783 257 aa12.72□□□□□ -0.37
SREBF1-216ENST00000490796 SULT1A2P50226 295 aa12.72□□□□□ -0.37
SREBF1-216ENST00000490796 KRTAP10-4P60372 401 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-216ENST00000490796 SERTAD4-AS1Q5TG53 156 aa12.72□□□□□ -0.37
SREBF1-216ENST00000490796 A0A1B0GUV1 79 aa12.71□□□□□ -0.37
SREBF1-216ENST00000490796 BCL2P10415 239 aa12.71□□□□□ -0.37
SREBF1-216ENST00000490796 COTL1Q14019 142 aa12.71□□□□□ -0.37
SREBF1-216ENST00000490796 WDR73Q6P4I2 378 aa12.71□□□□□ -0.37
SREBF1-216ENST00000490796 KRTAP26-1Q6PEX3 210 aa12.71□□□□□ -0.37
SREBF1-216ENST00000490796 C20orf203Q8NBC4 194 aa12.71□□□□□ -0.37
SREBF1-216ENST00000490796 DPH3Q96FX2 82 aa12.71□□□□□ -0.37
SREBF1-216ENST00000490796 PGLYRP4Q96LB8 373 aa12.71□□□□□ -0.37
SREBF1-216ENST00000490796 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.7□□□□□ -0.38
SREBF1-216ENST00000490796 AMTP48728 403 aa12.7□□□□□ -0.38
SREBF1-216ENST00000490796 TWIST1Q15672 202 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms