RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 MDFICQ9P1T7 246 aa10.88□□□□□ -0.67
ARHGEF39-205ENST00000490638 RNASE13Q5GAN3 156 aaKnown RBP10.87□□□□□ -0.67
ARHGEF39-205ENST00000490638 TMEM141Q96I45 108 aa10.87□□□□□ -0.67
ARHGEF39-205ENST00000490638 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
ARHGEF39-205ENST00000490638 OXLD1Q5BKU9 147 aa10.87□□□□□ -0.67
ARHGEF39-205ENST00000490638 TMEM263Q8WUH6 116 aaKnown RBP10.87□□□□□ -0.67
ARHGEF39-205ENST00000490638 ZNF503Q96F45 646 aa10.87□□□□□ -0.67
ARHGEF39-205ENST00000490638 C1orf43Q9BWL3 253 aa10.87□□□□□ -0.67
ARHGEF39-205ENST00000490638 hDV102S1A0JD36 115 aa10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 IGLL5B9A064 214 aa10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 IGLV1-40P01703 118 aa10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 KLK5Q9Y337 293 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 F8W735 103 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 CPAMD8Q8IZJ3 1885 aa10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 SH2D6Q7Z4S9 175 aa10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 NDUFA7O95182 113 aa10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 C11orf45Q8TAV5 145 aa10.86□□□□□ -0.67
ARHGEF39-205ENST00000490638 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF39-205ENST00000490638 IGKV2-29A2NJV5 120 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF39-205ENST00000490638 PFN2P35080 140 aa10.85□□□□□ -0.67
ARHGEF39-205ENST00000490638 XCL1P47992 114 aa10.84□□□□□ -0.67
ARHGEF39-205ENST00000490638 RPL39LQ96EH5 51 aaKnown RBP10.84□□□□□ -0.67
ARHGEF39-205ENST00000490638 K7EQD1 137 aa10.84□□□□□ -0.67
ARHGEF39-205ENST00000490638 SUMO4Q6EEV6 95 aa10.84□□□□□ -0.67
ARHGEF39-205ENST00000490638 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
ARHGEF39-205ENST00000490638 AMTNQ6UX39 209 aa10.84□□□□□ -0.67
ARHGEF39-205ENST00000490638 STPG4Q8N801 248 aa10.84□□□□□ -0.67
ARHGEF39-205ENST00000490638 PRB2P02812 416 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF39-205ENST00000490638 IL17DQ8TAD2 202 aa10.83□□□□□ -0.68
ARHGEF39-205ENST00000490638 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
ARHGEF39-205ENST00000490638 DSPP15924 2871 aaKnown RBP10.83□□□□□ -0.68
ARHGEF39-205ENST00000490638 FAM222AQ5U5X8 452 aa10.83□□□□□ -0.68
ARHGEF39-205ENST00000490638 SNHG12Q9BXW3 62 aa10.83□□□□□ -0.68
ARHGEF39-205ENST00000490638 TNRC6BQ9UPQ9 1833 aaKnown RBP10.83□□□□□ -0.68
ARHGEF39-205ENST00000490638 IGHV3-30P01768 117 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 IGHV3-33P01772 117 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 IGHV3-30-3P0DP02 117 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 IGHV3-30-5P0DP03 117 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 GHRHP01286 108 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 PAX2Q02962 417 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 NXPH4O95158 308 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 SPATA25Q9BR10 227 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 DMDP11532 3685 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 DNAJC30Q96LL9 226 aa10.82□□□□□ -0.68
ARHGEF39-205ENST00000490638 IGLV10-54A0A075B6I4 117 aa10.81□□□□□ -0.68
ARHGEF39-205ENST00000490638 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
ARHGEF39-205ENST00000490638 Q6ZTI0 123 aa10.81□□□□□ -0.68
ARHGEF39-205ENST00000490638 WFDC10AQ9H1F0 79 aa10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 DAZ2Q13117 558 aaKnown RBP10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 DAZ4Q86SG3 579 aaKnown RBP10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 C5orf38Q86SI9 138 aa10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 DAZ3Q9NR90 486 aaKnown RBP10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 MRPL35Q9NZE8 188 aaKnown RBP10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 ESDP10768 282 aa10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 ZNF80P51504 273 aaPredicted RBP10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 GTSF1Q8WW33 167 aa10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 PRSS29PA6NIE9 313 aa10.8□□□□□ -0.68
ARHGEF39-205ENST00000490638 SMIM9A6NGZ8 99 aa10.79□□□□□ -0.68
ARHGEF39-205ENST00000490638 F8VRH5 84 aa10.79□□□□□ -0.68
ARHGEF39-205ENST00000490638 C20orf173Q96LM9 149 aa10.79□□□□□ -0.68
ARHGEF39-205ENST00000490638 HERVK_113P63121 156 aa10.78□□□□□ -0.68
ARHGEF39-205ENST00000490638 ERG28Q9UKR5 140 aa10.78□□□□□ -0.68
ARHGEF39-205ENST00000490638 GDF5OSQ5U4N7 250 aa10.78□□□□□ -0.68
ARHGEF39-205ENST00000490638 ORAOV1Q8WV07 137 aa10.78□□□□□ -0.68
ARHGEF39-205ENST00000490638 MED14OSP0DP75 135 aa10.77□□□□□ -0.68
ARHGEF39-205ENST00000490638 HSD52Q0P140 79 aa10.77□□□□□ -0.68
ARHGEF39-205ENST00000490638 GATD1Q8NB37 220 aa10.77□□□□□ -0.68
ARHGEF39-205ENST00000490638 ODF3Q96PU9 254 aa10.77□□□□□ -0.68
ARHGEF39-205ENST00000490638 TRAV26-1A0A087WT03 109 aa10.77□□□□□ -0.69
ARHGEF39-205ENST00000490638 LEPROTO15243 131 aa10.77□□□□□ -0.69
ARHGEF39-205ENST00000490638 VSIG2Q96IQ7 327 aa10.77□□□□□ -0.69
ARHGEF39-205ENST00000490638 NDUFA12Q9UI09 145 aa10.77□□□□□ -0.69
ARHGEF39-205ENST00000490638 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.69
ARHGEF39-205ENST00000490638 TRBV6-1A0A0K0K1D8 114 aa10.77□□□□□ -0.69
ARHGEF39-205ENST00000490638 DEFB131BA0A096LNP1 70 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 H3BUT2 72 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 K7EMI3 77 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 NPSP0C0P6 89 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 KIR3DS1Q14943 382 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 KLK12Q9UKR0 248 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 SPANXA1Q9NS26 97 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 NBEAQ8NFP9 2946 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 TET2Q6N021 2002 aaPredicted RBP10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 CTRLP40313 264 aa10.76□□□□□ -0.69
ARHGEF39-205ENST00000490638 NKAPP1Q8N9T2 125 aa10.75□□□□□ -0.69
ARHGEF39-205ENST00000490638 FGF6P10767 208 aa10.75□□□□□ -0.69
ARHGEF39-205ENST00000490638 MIFP14174 115 aa10.75□□□□□ -0.69
ARHGEF39-205ENST00000490638 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
ARHGEF39-205ENST00000490638 C19orf71A6NCJ1 209 aa10.74□□□□□ -0.69
ARHGEF39-205ENST00000490638 LYRM9A8MSI8 78 aa10.74□□□□□ -0.69
ARHGEF39-205ENST00000490638 SPCS1Q9Y6A9 102 aa10.74□□□□□ -0.69
ARHGEF39-205ENST00000490638 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
ARHGEF39-205ENST00000490638 ZFP2Q6ZN57 461 aa10.74□□□□□ -0.69
ARHGEF39-205ENST00000490638 ZFAND2AQ8N6M9 145 aa10.74□□□□□ -0.69
ARHGEF39-205ENST00000490638 BOD1L1Q8NFC6 3051 aa10.73□□□□□ -0.69
ARHGEF39-205ENST00000490638 LINC00322Q6ZN03 302 aaPredicted RBP10.73□□□□□ -0.69
ARHGEF39-205ENST00000490638 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
ARHGEF39-205ENST00000490638 SPINK8P0C7L1 97 aa10.73□□□□□ -0.69
ARHGEF39-205ENST00000490638 ASPMQ8IZT6 3477 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms