RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 CAMPP49913 170 aa11.79□□□□□ -0.52
RAPGEF3-212ENST00000490387 KCNIP4Q6PIL6 250 aa11.79□□□□□ -0.52
RAPGEF3-212ENST00000490387 S100A8P05109 93 aa11.78□□□□□ -0.52
RAPGEF3-212ENST00000490387 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
RAPGEF3-212ENST00000490387 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
RAPGEF3-212ENST00000490387 RAB4AP20338 218 aa11.77□□□□□ -0.53
RAPGEF3-212ENST00000490387 SRIP30626 198 aa11.77□□□□□ -0.53
RAPGEF3-212ENST00000490387 FAM104BQ5XKR9 115 aa11.77□□□□□ -0.53
RAPGEF3-212ENST00000490387 FRZBQ92765 325 aa11.77□□□□□ -0.53
RAPGEF3-212ENST00000490387 URGCP-MRPS24S4R325 110 aa11.77□□□□□ -0.53
RAPGEF3-212ENST00000490387 TRAV26-2A0A0B4J265 109 aa11.76□□□□□ -0.53
RAPGEF3-212ENST00000490387 H7C1H1 209 aa11.76□□□□□ -0.53
RAPGEF3-212ENST00000490387 S100PP25815 95 aa11.76□□□□□ -0.53
RAPGEF3-212ENST00000490387 RASL11AQ6T310 242 aa11.76□□□□□ -0.53
RAPGEF3-212ENST00000490387 NEGR1Q7Z3B1 354 aa11.76□□□□□ -0.53
RAPGEF3-212ENST00000490387 SH2D6Q7Z4S9 175 aa11.76□□□□□ -0.53
RAPGEF3-212ENST00000490387 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 GAGE12JA6NER3 117 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 M0R2N4 97 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 GAGE1Q13065 139 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 GAGE4Q13068 117 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 GAGE5Q13069 117 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 ESRGQ1W209 222 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 GAGE13Q4V321 117 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 YPEL4Q96NS1 127 aa11.75□□□□□ -0.53
RAPGEF3-212ENST00000490387 GAS8-AS1O95177 125 aa11.74□□□□□ -0.53
RAPGEF3-212ENST00000490387 UBE2D3P61077 147 aa11.74□□□□□ -0.53
RAPGEF3-212ENST00000490387 UBE2D2P62837 147 aa11.74□□□□□ -0.53
RAPGEF3-212ENST00000490387 RPL36AP83881 106 aaKnown RBP11.74□□□□□ -0.53
RAPGEF3-212ENST00000490387 LINC00336Q6ZUF6 198 aa11.74□□□□□ -0.53
RAPGEF3-212ENST00000490387 ZNRF2Q8NHG8 242 aa11.74□□□□□ -0.53
RAPGEF3-212ENST00000490387 RPL36ALQ969Q0 106 aaKnown RBP11.74□□□□□ -0.53
RAPGEF3-212ENST00000490387 MRAP2Q96G30 205 aa11.74□□□□□ -0.53
RAPGEF3-212ENST00000490387 IGLV2-18A0A075B6J9 118 aa11.73□□□□□ -0.53
RAPGEF3-212ENST00000490387 TIRAPP58753 221 aa11.73□□□□□ -0.53
RAPGEF3-212ENST00000490387 ELOBQ15370 118 aa11.73□□□□□ -0.53
RAPGEF3-212ENST00000490387 MRPL51Q4U2R6 128 aaKnown RBP11.73□□□□□ -0.53
RAPGEF3-212ENST00000490387 LYPD5Q6UWN5 251 aa11.73□□□□□ -0.53
RAPGEF3-212ENST00000490387 DNAJC30Q96LL9 226 aa11.73□□□□□ -0.53
RAPGEF3-212ENST00000490387 NIT2Q9NQR4 276 aa11.73□□□□□ -0.53
RAPGEF3-212ENST00000490387 LINC00588Q9Y4M8 146 aa11.73□□□□□ -0.53
RAPGEF3-212ENST00000490387 HECTD4Q9Y4D8 3996 aa11.72□□□□□ -0.53
RAPGEF3-212ENST00000490387 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
RAPGEF3-212ENST00000490387 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
RAPGEF3-212ENST00000490387 RPL39LQ96EH5 51 aaKnown RBP11.72□□□□□ -0.53
RAPGEF3-212ENST00000490387 TRBV24-1A0A075B6N3 115 aa11.71□□□□□ -0.53
RAPGEF3-212ENST00000490387 RPS10P46783 165 aaKnown RBP11.71□□□□□ -0.53
RAPGEF3-212ENST00000490387 CCL18P55774 89 aa11.71□□□□□ -0.53
RAPGEF3-212ENST00000490387 GTSF1LQ9H1H1 148 aa11.71□□□□□ -0.53
RAPGEF3-212ENST00000490387 TGIF2-C20orf24A0A0A6YYL0 155 aa11.7□□□□□ -0.54
RAPGEF3-212ENST00000490387 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
RAPGEF3-212ENST00000490387 SMKR1H3BMG3 65 aa11.7□□□□□ -0.54
RAPGEF3-212ENST00000490387 CBLN2Q8IUK8 224 aa11.7□□□□□ -0.54
RAPGEF3-212ENST00000490387 NRACQ8N912 160 aa11.7□□□□□ -0.54
RAPGEF3-212ENST00000490387 UPK3BQ9BT76 320 aa11.7□□□□□ -0.54
RAPGEF3-212ENST00000490387 MRPS16Q9Y3D3 137 aaKnown RBP11.7□□□□□ -0.54
RAPGEF3-212ENST00000490387 NCR2O95944 276 aa11.69□□□□□ -0.54
RAPGEF3-212ENST00000490387 GNB1LQ9BYB4 327 aa11.69□□□□□ -0.54
RAPGEF3-212ENST00000490387 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
RAPGEF3-212ENST00000490387 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
RAPGEF3-212ENST00000490387 PRSS29PA6NIE9 313 aa11.68□□□□□ -0.54
RAPGEF3-212ENST00000490387 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
RAPGEF3-212ENST00000490387 DAZ4Q86SG3 579 aaKnown RBP11.68□□□□□ -0.54
RAPGEF3-212ENST00000490387 DAZ3Q9NR90 486 aaKnown RBP11.68□□□□□ -0.54
RAPGEF3-212ENST00000490387 D6R8Y8 96 aa11.67□□□□□ -0.54
RAPGEF3-212ENST00000490387 RTL8CO15255 209 aa11.67□□□□□ -0.54
RAPGEF3-212ENST00000490387 ATP6V1G1O75348 118 aa11.67□□□□□ -0.54
RAPGEF3-212ENST00000490387 HLA-DQA1P01909 254 aa11.67□□□□□ -0.54
RAPGEF3-212ENST00000490387 PPBPP02775 128 aa11.67□□□□□ -0.54
RAPGEF3-212ENST00000490387 COX19Q49B96 90 aa11.67□□□□□ -0.54
RAPGEF3-212ENST00000490387 IGHV3-38A0A0C4DH36 116 aa11.66□□□□□ -0.54
RAPGEF3-212ENST00000490387 PPP1R17O96001 155 aa11.66□□□□□ -0.54
RAPGEF3-212ENST00000490387 CKS2P33552 79 aa11.66□□□□□ -0.54
RAPGEF3-212ENST00000490387 LELP1Q5T871 98 aa11.66□□□□□ -0.54
RAPGEF3-212ENST00000490387 Q6ZR54 194 aa11.66□□□□□ -0.54
RAPGEF3-212ENST00000490387 SDHAF1A6NFY7 115 aa11.65□□□□□ -0.54
RAPGEF3-212ENST00000490387 MT-ND6P03923 174 aa11.65□□□□□ -0.54
RAPGEF3-212ENST00000490387 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-212ENST00000490387 NTM-AS1Q6ZSK4 140 aa11.65□□□□□ -0.54
RAPGEF3-212ENST00000490387 ORMDL3Q8N138 153 aa11.65□□□□□ -0.54
RAPGEF3-212ENST00000490387 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
RAPGEF3-212ENST00000490387 A0A1B0GVY2 172 aa11.64□□□□□ -0.55
RAPGEF3-212ENST00000490387 PHOX2AO14813 284 aa11.64□□□□□ -0.55
RAPGEF3-212ENST00000490387 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
RAPGEF3-212ENST00000490387 NPYP01303 97 aa11.64□□□□□ -0.55
RAPGEF3-212ENST00000490387 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
RAPGEF3-212ENST00000490387 TRBV6-8A0A0A6YYG3 113 aa11.63□□□□□ -0.55
RAPGEF3-212ENST00000490387 TRBV27A0A0K0K1C4 114 aa11.63□□□□□ -0.55
RAPGEF3-212ENST00000490387 APCSP02743 223 aa11.63□□□□□ -0.55
RAPGEF3-212ENST00000490387 S100A1P23297 94 aa11.63□□□□□ -0.55
RAPGEF3-212ENST00000490387 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
RAPGEF3-212ENST00000490387 RPL32P62910 135 aaKnown RBP11.63□□□□□ -0.55
RAPGEF3-212ENST00000490387 WFDC10BQ8IUB3 73 aa11.63□□□□□ -0.55
RAPGEF3-212ENST00000490387 C20orf78Q9BR46 151 aa11.63□□□□□ -0.55
RAPGEF3-212ENST00000490387 FAT2Q9NYQ8 4349 aa11.62□□□□□ -0.55
RAPGEF3-212ENST00000490387 DNAH2Q9P225 4427 aa11.62□□□□□ -0.55
RAPGEF3-212ENST00000490387 SCO1O75880 301 aa11.62□□□□□ -0.55
RAPGEF3-212ENST00000490387 TMEM97Q5BJF2 176 aa11.62□□□□□ -0.55
RAPGEF3-212ENST00000490387 C1orf134Q5TEV5 83 aa11.62□□□□□ -0.55
RAPGEF3-212ENST00000490387 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms