RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 OR2T2Q6IF00 324 aa2.43□□□□□ -2.02
TM9SF3-206ENST00000490192 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
TM9SF3-206ENST00000490192 SBSPONQ8IVN8 264 aa2.43□□□□□ -2.02
TM9SF3-206ENST00000490192 TMEM242Q9NWH2 141 aa2.43□□□□□ -2.02
TM9SF3-206ENST00000490192 NDUFA12Q9UI09 145 aa2.43□□□□□ -2.02
TM9SF3-206ENST00000490192 SHPRHQ149N8 1683 aa2.43□□□□□ -2.02
TM9SF3-206ENST00000490192 ALKQ9UM73 1620 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 MYH9P35579 1960 aaKnown RBP2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 PPLO60437 1756 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 KDM5AP29375 1690 aaKnown RBP2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 NKTRP30414 1462 aaKnown RBP2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 IFNGP01579 166 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 IL5P05113 134 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 FGF7P21781 194 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 FXYD4P59646 89 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 COPS9Q8WXC6 57 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 GNG8Q9UK08 70 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 ZGRF1Q86YA3 2104 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 CPSF1Q10570 1443 aaKnown RBP2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 TECTAO75443 2155 aa2.42□□□□□ -2.02
TM9SF3-206ENST00000490192 CLTCQ00610 1675 aaKnown RBP2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 PREX1Q8TCU6 1659 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 QRICH2Q9H0J4 1663 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 CDC42BPGQ6DT37 1551 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 ATP7BP35670 1465 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 TRBV10-1A0A0K0K1A3 114 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 SPAARA0A1B0GVQ0 90 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 CCDC179H3BU77 68 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 LYNX1P0DP58 116 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 SPANXN1Q5VSR9 72 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 SPTSSAQ969W0 71 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 AGPAT4-IT1Q9H0P7 198 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 NRXN3Q9Y4C0 1643 aa2.41□□□□□ -2.02
TM9SF3-206ENST00000490192 AKAP11Q9UKA4 1901 aa2.4□□□□□ -2.02
TM9SF3-206ENST00000490192 SPEF2Q9C093 1822 aa2.4□□□□□ -2.02
TM9SF3-206ENST00000490192 AKAIN1P0CW23 69 aa2.4□□□□□ -2.03
TM9SF3-206ENST00000490192 WHAMMP3Q1A5X7 153 aa2.4□□□□□ -2.03
TM9SF3-206ENST00000490192 SCN3BQ9NY72 215 aa2.4□□□□□ -2.03
TM9SF3-206ENST00000490192 CPS1P31327 1500 aa2.4□□□□□ -2.03
TM9SF3-206ENST00000490192 BCL9LQ86UU0 1499 aa2.39□□□□□ -2.03
TM9SF3-206ENST00000490192 LRRC7Q96NW7 1537 aa2.39□□□□□ -2.03
TM9SF3-206ENST00000490192 PRB1P04280 392 aa2.39□□□□□ -2.03
TM9SF3-206ENST00000490192 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
TM9SF3-206ENST00000490192 RERGLQ9H628 205 aa2.39□□□□□ -2.03
TM9SF3-206ENST00000490192 EDC4Q6P2E9 1401 aaKnown RBP2.39□□□□□ -2.03
TM9SF3-206ENST00000490192 PPIP5K1Q6PFW1 1433 aa2.39□□□□□ -2.03
TM9SF3-206ENST00000490192 CDK12Q9NYV4 1490 aaPredicted RBP2.39□□□□□ -2.03
TM9SF3-206ENST00000490192 NCOA6Q14686 2063 aaPredicted RBP2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 SNRNP200O75643 2136 aaKnown RBP2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 F6UZH7 168 aa2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 PLXNA2O75051 1894 aa2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 SNCGO76070 127 aa2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 CCKP06307 115 aa2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 BTG2P78543 158 aa2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 NRKQ7Z2Y5 1582 aa2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 PP6455Q8WZ26 134 aa2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 MRPL35Q9NZE8 188 aaKnown RBP2.38□□□□□ -2.03
TM9SF3-206ENST00000490192 SLIT1O75093 1534 aa2.37□□□□□ -2.03
TM9SF3-206ENST00000490192 HIGD1CA8MV81 97 aa2.37□□□□□ -2.03
TM9SF3-206ENST00000490192 NDUFB6O95139 128 aa2.37□□□□□ -2.03
TM9SF3-206ENST00000490192 PIPP12273 146 aaPredicted RBP2.37□□□□□ -2.03
TM9SF3-206ENST00000490192 Q6ZSA8 131 aa2.37□□□□□ -2.03
TM9SF3-206ENST00000490192 KNDC1Q76NI1 1749 aa2.37□□□□□ -2.03
TM9SF3-206ENST00000490192 LOC101927531A0A1B0GV80 90 aa2.36□□□□□ -2.03
TM9SF3-206ENST00000490192 MIF4GDA9UHW6 222 aaKnown RBP2.36□□□□□ -2.03
TM9SF3-206ENST00000490192 TMEM141Q96I45 108 aa2.36□□□□□ -2.03
TM9SF3-206ENST00000490192 NAA60Q9H7X0 242 aa2.36□□□□□ -2.03
TM9SF3-206ENST00000490192 TOPAZ1Q8N9V7 1692 aa2.36□□□□□ -2.03
TM9SF3-206ENST00000490192 NWD1Q149M9 1564 aa2.36□□□□□ -2.03
TM9SF3-206ENST00000490192 ANKARQ7Z5J8 1434 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 C3P01024 1663 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 UBR1Q8IWV7 1749 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 XRN1Q8IZH2 1706 aaKnown RBP2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 PEAK1Q9H792 1746 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 ANKRD26Q9UPS8 1709 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 CORTO00230 105 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 NCR3O14931 201 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 S100PP25815 95 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 SLC48A1Q6P1K1 146 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 LSM10Q969L4 123 aaKnown RBP2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 SERP1Q9Y6X1 66 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 DIP2AQ14689 1571 aa2.35□□□□□ -2.03
TM9SF3-206ENST00000490192 RGPD1P0DJD0 1748 aa2.34□□□□□ -2.03
TM9SF3-206ENST00000490192 MON2Q7Z3U7 1717 aa2.34□□□□□ -2.03
TM9SF3-206ENST00000490192 SNAPC5O75971 98 aa2.34□□□□□ -2.03
TM9SF3-206ENST00000490192 IFI27L1Q96BM0 104 aa2.34□□□□□ -2.03
TM9SF3-206ENST00000490192 AMELYQ99218 206 aa2.34□□□□□ -2.03
TM9SF3-206ENST00000490192 CEP170BQ9Y4F5 1589 aaPredicted RBP2.34□□□□□ -2.03
TM9SF3-206ENST00000490192 RP1L1Q8IWN7 2480 aaPredicted RBP2.34□□□□□ -2.04
TM9SF3-206ENST00000490192 FBN1P35555 2871 aaKnown RBP2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 LRRC37A3O60309 1634 aa2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 S100A1P23297 94 aa2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 UBE2G1P62253 170 aa2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 S100A7L2Q5SY68 101 aa2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 RPL7L1Q6DKI1 246 aaKnown RBP2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 TSKUQ8WUA8 353 aa2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 PRRC2BQ5JSZ5 2229 aaKnown RBP2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 KIF20BQ96Q89 1820 aa2.33□□□□□ -2.04
TM9SF3-206ENST00000490192 ATG2AQ2TAZ0 1938 aa2.32□□□□□ -2.04
TM9SF3-206ENST00000490192 NFAT5O94916 1531 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms