RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 TRBV24-1A0A075B6N3 115 aa8.64□□□□□ -1.03
HDAC1-210ENST00000490081 NUDT3O95989 172 aa8.64□□□□□ -1.03
HDAC1-210ENST00000490081 PPP1R17O96001 155 aa8.64□□□□□ -1.03
HDAC1-210ENST00000490081 SRIP30626 198 aa8.64□□□□□ -1.03
HDAC1-210ENST00000490081 RPL36AP83881 106 aaKnown RBP8.64□□□□□ -1.03
HDAC1-210ENST00000490081 SUMO4Q6EEV6 95 aa8.64□□□□□ -1.03
HDAC1-210ENST00000490081 MRPL54Q6P161 138 aaKnown RBP8.64□□□□□ -1.03
HDAC1-210ENST00000490081 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
HDAC1-210ENST00000490081 RPL36ALQ969Q0 106 aaKnown RBP8.64□□□□□ -1.03
HDAC1-210ENST00000490081 TRBV6-5A0A0K0K1A5 114 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 PPBPP02775 128 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 MGPP08493 103 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 CAMPP49913 170 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 CCL18P55774 89 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 UBE2D3P61077 147 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 UBE2D2P62837 147 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 ATRAIDQ6UW56 229 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 Q9UF83 564 aa8.63□□□□□ -1.03
HDAC1-210ENST00000490081 HYDINQ4G0P3 5121 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 LOC100131303A0A0U1RQF7 123 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 ELOBQ15370 118 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 ESRGQ1W209 222 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 DAZ4Q86SG3 579 aaKnown RBP8.62□□□□□ -1.03
HDAC1-210ENST00000490081 ATP6V0E2Q8NHE4 81 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 ZNRF2Q8NHG8 242 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 GNB1LQ9BYB4 327 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 GTSF1LQ9H1H1 148 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 DAZ3Q9NR90 486 aaKnown RBP8.62□□□□□ -1.03
HDAC1-210ENST00000490081 SMCO4Q9NRQ5 59 aa8.62□□□□□ -1.03
HDAC1-210ENST00000490081 EPPK1P58107 5090 aaKnown RBP8.62□□□□□ -1.03
HDAC1-210ENST00000490081 VPS13DQ5THJ4 4388 aa8.61□□□□□ -1.03
HDAC1-210ENST00000490081 PHOX2AO14813 284 aa8.61□□□□□ -1.03
HDAC1-210ENST00000490081 S100A1P23297 94 aa8.61□□□□□ -1.03
HDAC1-210ENST00000490081 MRPL51Q4U2R6 128 aaKnown RBP8.61□□□□□ -1.03
HDAC1-210ENST00000490081 TMEM97Q5BJF2 176 aa8.61□□□□□ -1.03
HDAC1-210ENST00000490081 UPK3BQ9BT76 320 aa8.61□□□□□ -1.03
HDAC1-210ENST00000490081 TNFRSF18Q9Y5U5 241 aa8.61□□□□□ -1.03
HDAC1-210ENST00000490081 URGCP-MRPS24S4R325 110 aa8.61□□□□□ -1.03
HDAC1-210ENST00000490081 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 HLA-DQA1P01909 254 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 MT-ND6P03923 174 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 GAGE1Q13065 139 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 GAGE4Q13068 117 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 GAGE5Q13069 117 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 GAGE13Q4V321 117 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 TMEM136Q6ZRR5 245 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.6□□□□□ -1.03
HDAC1-210ENST00000490081 LINC00476Q8WZB0 136 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
HDAC1-210ENST00000490081 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
HDAC1-210ENST00000490081 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
HDAC1-210ENST00000490081 RPL32P62910 135 aaKnown RBP8.59□□□□□ -1.03
HDAC1-210ENST00000490081 C20orf78Q9BR46 151 aa8.59□□□□□ -1.03
HDAC1-210ENST00000490081 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
HDAC1-210ENST00000490081 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
HDAC1-210ENST00000490081 CKS2P33552 79 aa8.58□□□□□ -1.04
HDAC1-210ENST00000490081 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
HDAC1-210ENST00000490081 LELP1Q5T871 98 aa8.58□□□□□ -1.04
HDAC1-210ENST00000490081 NRACQ8N912 160 aa8.58□□□□□ -1.04
HDAC1-210ENST00000490081 TRAV26-2A0A0B4J265 109 aa8.57□□□□□ -1.04
HDAC1-210ENST00000490081 TRBV27A0A0K0K1C4 114 aa8.57□□□□□ -1.04
HDAC1-210ENST00000490081 K7EP13 123 aa8.57□□□□□ -1.04
HDAC1-210ENST00000490081 OR10J3Q5JRS4 329 aa8.57□□□□□ -1.04
HDAC1-210ENST00000490081 ORMDL3Q8N138 153 aa8.57□□□□□ -1.04
HDAC1-210ENST00000490081 ST20Q9HBF5 79 aa8.57□□□□□ -1.04
HDAC1-210ENST00000490081 ALMS1Q8TCU4 4167 aa8.56□□□□□ -1.04
HDAC1-210ENST00000490081 TGIF2-C20orf24A0A0A6YYL0 155 aa8.56□□□□□ -1.04
HDAC1-210ENST00000490081 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
HDAC1-210ENST00000490081 NCR2O95944 276 aa8.56□□□□□ -1.04
HDAC1-210ENST00000490081 RPS10P46783 165 aaKnown RBP8.56□□□□□ -1.04
HDAC1-210ENST00000490081 RPL39LQ96EH5 51 aaKnown RBP8.56□□□□□ -1.04
HDAC1-210ENST00000490081 TRBV6-8A0A0A6YYG3 113 aa8.55□□□□□ -1.04
HDAC1-210ENST00000490081 D6R8Y8 96 aa8.55□□□□□ -1.04
HDAC1-210ENST00000490081 VCYO14598 125 aa8.55□□□□□ -1.04
HDAC1-210ENST00000490081 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
HDAC1-210ENST00000490081 TNFRSF6BO95407 300 aa8.55□□□□□ -1.04
HDAC1-210ENST00000490081 APCSP02743 223 aa8.55□□□□□ -1.04
HDAC1-210ENST00000490081 SUMO2P61956 95 aaKnown RBP8.55□□□□□ -1.04
HDAC1-210ENST00000490081 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
HDAC1-210ENST00000490081 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
HDAC1-210ENST00000490081 I3L3M4 83 aa8.54□□□□□ -1.04
HDAC1-210ENST00000490081 TCAPO15273 167 aa8.54□□□□□ -1.04
HDAC1-210ENST00000490081 IQCJQ1A5X6 159 aa8.54□□□□□ -1.04
HDAC1-210ENST00000490081 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
HDAC1-210ENST00000490081 UBE2DNLQ8IWF7 75 aa8.54□□□□□ -1.04
HDAC1-210ENST00000490081 PRELID3AQ96N28 172 aa8.54□□□□□ -1.04
HDAC1-210ENST00000490081 Q9H8V8 135 aa8.54□□□□□ -1.04
HDAC1-210ENST00000490081 COLCA2A8K830 154 aa8.53□□□□□ -1.04
HDAC1-210ENST00000490081 SMKR1H3BMG3 65 aa8.53□□□□□ -1.04
HDAC1-210ENST00000490081 ATP6V1G1O75348 118 aa8.53□□□□□ -1.04
HDAC1-210ENST00000490081 LY6G6CO95867 125 aa8.53□□□□□ -1.04
HDAC1-210ENST00000490081 DNAH10OSP0CZ25 163 aa8.53□□□□□ -1.04
HDAC1-210ENST00000490081 BTF3P20290 206 aaKnown RBP8.53□□□□□ -1.04
HDAC1-210ENST00000490081 PKIAP61925 76 aa8.53□□□□□ -1.04
HDAC1-210ENST00000490081 COTL1Q14019 142 aa8.53□□□□□ -1.04
HDAC1-210ENST00000490081 NTM-AS1Q6ZSK4 140 aa8.53□□□□□ -1.04
HDAC1-210ENST00000490081 CHCHD7Q9BUK0 85 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms