RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 CST9LP1Q5W188 147 aa7.78□□□□□ -1.16
SRSF4-204ENST00000489898 ATRAIDQ6UW56 229 aa7.78□□□□□ -1.16
SRSF4-204ENST00000489898 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
SRSF4-204ENST00000489898 TRAV8-6A0A0B4J262 113 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 M0R381 172 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 PDE6DO43924 150 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 OR5AL1P0C617 328 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 IGLC6P0CF74 106 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 GCSHP23434 173 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 UBE2G1P62253 170 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 SRSF3P84103 164 aaKnown RBP7.77□□□□□ -1.17
SRSF4-204ENST00000489898 FAM74A4Q5TZK3 123 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.17
SRSF4-204ENST00000489898 CARHSP1Q9Y2V2 147 aaKnown RBP7.77□□□□□ -1.17
SRSF4-204ENST00000489898 TRBV10-1A0A0K0K1A3 114 aa7.76□□□□□ -1.17
SRSF4-204ENST00000489898 C19orf71A6NCJ1 209 aa7.76□□□□□ -1.17
SRSF4-204ENST00000489898 RPL35P42766 123 aaKnown RBP7.76□□□□□ -1.17
SRSF4-204ENST00000489898 NTM-AS1Q6ZSK4 140 aa7.76□□□□□ -1.17
SRSF4-204ENST00000489898 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
SRSF4-204ENST00000489898 IGLV5-52A0A0A0MRZ9 124 aa7.75□□□□□ -1.17
SRSF4-204ENST00000489898 EPM2AB3EWF7 344 aa7.75□□□□□ -1.17
SRSF4-204ENST00000489898 TMEM250H0YL14 139 aa7.75□□□□□ -1.17
SRSF4-204ENST00000489898 NDUFS6O75380 124 aaKnown RBP7.75□□□□□ -1.17
SRSF4-204ENST00000489898 KRTAP26-1Q6PEX3 210 aa7.75□□□□□ -1.17
SRSF4-204ENST00000489898 PHLDA3Q9Y5J5 127 aa7.75□□□□□ -1.17
SRSF4-204ENST00000489898 TNXBP22105 4242 aa7.74□□□□□ -1.17
SRSF4-204ENST00000489898 MUC21A0A0G2JKD1 596 aa7.74□□□□□ -1.17
SRSF4-204ENST00000489898 MUC21A0A140T8X8 626 aa7.74□□□□□ -1.17
SRSF4-204ENST00000489898 EREGO14944 169 aa7.74□□□□□ -1.17
SRSF4-204ENST00000489898 LECT2O14960 151 aa7.74□□□□□ -1.17
SRSF4-204ENST00000489898 SRP19P09132 144 aaKnown RBP7.74□□□□□ -1.17
SRSF4-204ENST00000489898 FAM74A3Q4VXF1 159 aa7.74□□□□□ -1.17
SRSF4-204ENST00000489898 CENPWQ5EE01 88 aa7.74□□□□□ -1.17
SRSF4-204ENST00000489898 SYT8Q8NBV8 401 aa7.74□□□□□ -1.17
SRSF4-204ENST00000489898 TRBV7-3A0A075B6L6 115 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 ZNF727A8MUV8 499 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
SRSF4-204ENST00000489898 GZMBP10144 247 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 PNRC1Q12796 327 aaPredicted RBP7.73□□□□□ -1.17
SRSF4-204ENST00000489898 RHEBQ15382 184 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 MPV17L2Q567V2 206 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 ENHOQ6UWT2 76 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 BAGE2Q86Y30 109 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 SMIM7Q9BQ49 75 aa7.73□□□□□ -1.17
SRSF4-204ENST00000489898 A0A087WWC5 75 aa7.72□□□□□ -1.17
SRSF4-204ENST00000489898 C9JQL5 133 aa7.72□□□□□ -1.17
SRSF4-204ENST00000489898 S100A9P06702 114 aaKnown RBP7.72□□□□□ -1.17
SRSF4-204ENST00000489898 ADCYAP1P18509 176 aa7.72□□□□□ -1.17
SRSF4-204ENST00000489898 RAB4BP61018 213 aa7.72□□□□□ -1.17
SRSF4-204ENST00000489898 C10orf91Q5T1B1 145 aa7.72□□□□□ -1.17
SRSF4-204ENST00000489898 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.72□□□□□ -1.17
SRSF4-204ENST00000489898 CLRN3Q8NCR9 226 aa7.72□□□□□ -1.17
SRSF4-204ENST00000489898 CHCHD7Q9BUK0 85 aa7.72□□□□□ -1.17
SRSF4-204ENST00000489898 TRBV6-8A0A0A6YYG3 113 aa7.71□□□□□ -1.18
SRSF4-204ENST00000489898 PSCAO43653 123 aa7.71□□□□□ -1.18
SRSF4-204ENST00000489898 BAALCQ8WXS3 180 aa7.71□□□□□ -1.18
SRSF4-204ENST00000489898 RPS10P5Q9NQ39 176 aa7.71□□□□□ -1.18
SRSF4-204ENST00000489898 KLK12Q9UKR0 248 aa7.71□□□□□ -1.18
SRSF4-204ENST00000489898 TRAV8-3A0A0A6YYJ7 113 aa7.7□□□□□ -1.18
SRSF4-204ENST00000489898 K7EN84 100 aa7.7□□□□□ -1.18
SRSF4-204ENST00000489898 CTRLP40313 264 aa7.7□□□□□ -1.18
SRSF4-204ENST00000489898 CNFNQ9BYD5 112 aa7.7□□□□□ -1.18
SRSF4-204ENST00000489898 PRR34Q9NV39 138 aa7.7□□□□□ -1.18
SRSF4-204ENST00000489898 NAT8Q9UHE5 227 aa7.7□□□□□ -1.18
SRSF4-204ENST00000489898 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.69□□□□□ -1.18
SRSF4-204ENST00000489898 M0QY20 66 aa7.69□□□□□ -1.18
SRSF4-204ENST00000489898 SCO1O75880 301 aa7.69□□□□□ -1.18
SRSF4-204ENST00000489898 ADIRFQ15847 76 aa7.69□□□□□ -1.18
SRSF4-204ENST00000489898 ZNF56Q15929 161 aa7.69□□□□□ -1.18
SRSF4-204ENST00000489898 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
SRSF4-204ENST00000489898 SCXQ7RTU7 201 aa7.69□□□□□ -1.18
SRSF4-204ENST00000489898 Q8N976 141 aa7.69□□□□□ -1.18
SRSF4-204ENST00000489898 SMCO4Q9NRQ5 59 aa7.69□□□□□ -1.18
SRSF4-204ENST00000489898 INAFM2P0DMQ5 153 aa7.68□□□□□ -1.18
SRSF4-204ENST00000489898 RPL36AP83881 106 aaKnown RBP7.68□□□□□ -1.18
SRSF4-204ENST00000489898 SUMO4Q6EEV6 95 aa7.68□□□□□ -1.18
SRSF4-204ENST00000489898 RPL36ALQ969Q0 106 aaKnown RBP7.68□□□□□ -1.18
SRSF4-204ENST00000489898 SMIM12Q96EX1 92 aa7.68□□□□□ -1.18
SRSF4-204ENST00000489898 TM2D2Q9BX73 214 aa7.68□□□□□ -1.18
SRSF4-204ENST00000489898 GFRA4Q9GZZ7 299 aa7.68□□□□□ -1.18
SRSF4-204ENST00000489898 MT-ND4LP03901 98 aa7.67□□□□□ -1.18
SRSF4-204ENST00000489898 UBE2WQ96B02 151 aa7.67□□□□□ -1.18
SRSF4-204ENST00000489898 AP1S3Q96PC3 154 aa7.67□□□□□ -1.18
SRSF4-204ENST00000489898 IGKV2D-24A0A075B6R9 120 aa7.66□□□□□ -1.18
SRSF4-204ENST00000489898 C7orf77A4D0Y5 90 aa7.66□□□□□ -1.18
SRSF4-204ENST00000489898 GNG4P50150 75 aa7.66□□□□□ -1.18
SRSF4-204ENST00000489898 IQCJQ1A5X6 159 aa7.66□□□□□ -1.18
SRSF4-204ENST00000489898 FER1L6-AS1Q8NA97 138 aa7.66□□□□□ -1.18
SRSF4-204ENST00000489898 FRZBQ92765 325 aa7.66□□□□□ -1.18
SRSF4-204ENST00000489898 PANO1I0J062 215 aa7.65□□□□□ -1.18
SRSF4-204ENST00000489898 PPP1R2P9O14990 202 aa7.65□□□□□ -1.18
SRSF4-204ENST00000489898 S100PP25815 95 aa7.65□□□□□ -1.18
SRSF4-204ENST00000489898 RBX1P62877 108 aa7.65□□□□□ -1.18
SRSF4-204ENST00000489898 SPANXN1Q5VSR9 72 aa7.65□□□□□ -1.18
SRSF4-204ENST00000489898 C20orf203Q8NBC4 194 aa7.65□□□□□ -1.18
SRSF4-204ENST00000489898 OR2D3Q8NGH3 330 aa7.65□□□□□ -1.18
SRSF4-204ENST00000489898 GTSF1Q8WW33 167 aa7.65□□□□□ -1.18
SRSF4-204ENST00000489898 CTDSP1Q9GZU7 261 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms