RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 BATF3Q9NR55 127 aa8.68□□□□□ -1.02
LINC00173-204ENST00000489452 SCO2A0A1W2PP80 73 aa8.67□□□□□ -1.02
LINC00173-204ENST00000489452 GAGE6Q13070 117 aa8.67□□□□□ -1.02
LINC00173-204ENST00000489452 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.67□□□□□ -1.02
LINC00173-204ENST00000489452 TCEAL7Q9BRU2 100 aa8.67□□□□□ -1.02
LINC00173-204ENST00000489452 S100A9P06702 114 aaKnown RBP8.66□□□□□ -1.02
LINC00173-204ENST00000489452 PRSS1P07477 247 aa8.66□□□□□ -1.02
LINC00173-204ENST00000489452 NTM-AS1Q6ZSK4 140 aa8.66□□□□□ -1.02
LINC00173-204ENST00000489452 DERL1Q9BUN8 251 aa8.66□□□□□ -1.02
LINC00173-204ENST00000489452 SMIM17P0DL12 118 aa8.65□□□□□ -1.02
LINC00173-204ENST00000489452 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
LINC00173-204ENST00000489452 RBX1P62877 108 aa8.65□□□□□ -1.02
LINC00173-204ENST00000489452 LINC00269Q8N2A0 174 aa8.65□□□□□ -1.02
LINC00173-204ENST00000489452 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
LINC00173-204ENST00000489452 MLST8Q9BVC4 326 aa8.65□□□□□ -1.02
LINC00173-204ENST00000489452 PKHD1L1Q86WI1 4243 aa8.65□□□□□ -1.02
LINC00173-204ENST00000489452 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.03
LINC00173-204ENST00000489452 SNAI2O43623 268 aa8.64□□□□□ -1.03
LINC00173-204ENST00000489452 PFDN1O60925 122 aa8.64□□□□□ -1.03
LINC00173-204ENST00000489452 OXTP01178 125 aa8.64□□□□□ -1.03
LINC00173-204ENST00000489452 MIAQ16674 131 aa8.64□□□□□ -1.03
LINC00173-204ENST00000489452 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
LINC00173-204ENST00000489452 TMUB2Q71RG4 321 aa8.64□□□□□ -1.03
LINC00173-204ENST00000489452 TPPP3Q9BW30 176 aa8.64□□□□□ -1.03
LINC00173-204ENST00000489452 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
LINC00173-204ENST00000489452 CXCL1P09341 107 aa8.63□□□□□ -1.03
LINC00173-204ENST00000489452 OR5AL1P0C617 328 aa8.63□□□□□ -1.03
LINC00173-204ENST00000489452 GZMBP10144 247 aa8.63□□□□□ -1.03
LINC00173-204ENST00000489452 PKIAP61925 76 aa8.63□□□□□ -1.03
LINC00173-204ENST00000489452 KCNRGQ8N5I3 272 aa8.63□□□□□ -1.03
LINC00173-204ENST00000489452 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
LINC00173-204ENST00000489452 IGLV10-54A0A075B6I4 117 aa8.62□□□□□ -1.03
LINC00173-204ENST00000489452 MGPP08493 103 aa8.62□□□□□ -1.03
LINC00173-204ENST00000489452 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
LINC00173-204ENST00000489452 TMEM97Q5BJF2 176 aa8.62□□□□□ -1.03
LINC00173-204ENST00000489452 DGAT2L7PQ6IED9 249 aa8.62□□□□□ -1.03
LINC00173-204ENST00000489452 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.62□□□□□ -1.03
LINC00173-204ENST00000489452 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 UMAD1C9J7I0 102 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 PANO1I0J062 215 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 RPL35P42766 123 aaKnown RBP8.61□□□□□ -1.03
LINC00173-204ENST00000489452 RAB5CP51148 216 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 HNRNPA3P51991 378 aaKnown RBP8.61□□□□□ -1.03
LINC00173-204ENST00000489452 CCL20P78556 96 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 DAZAP1Q96EP5 407 aaKnown RBP8.61□□□□□ -1.03
LINC00173-204ENST00000489452 DPH3Q96FX2 82 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 AP1S3Q96PC3 154 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 VAX2Q9UIW0 290 aa8.61□□□□□ -1.03
LINC00173-204ENST00000489452 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
LINC00173-204ENST00000489452 RGS21Q2M5E4 152 aa8.6□□□□□ -1.03
LINC00173-204ENST00000489452 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
LINC00173-204ENST00000489452 M0QY20 66 aa8.59□□□□□ -1.03
LINC00173-204ENST00000489452 NKX2-5P52952 324 aaPredicted RBP8.59□□□□□ -1.03
LINC00173-204ENST00000489452 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
LINC00173-204ENST00000489452 OR2D3Q8NGH3 330 aa8.59□□□□□ -1.03
LINC00173-204ENST00000489452 GNG13Q9P2W3 67 aa8.59□□□□□ -1.03
LINC00173-204ENST00000489452 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
LINC00173-204ENST00000489452 hDV102S1A0JD36 115 aa8.58□□□□□ -1.04
LINC00173-204ENST00000489452 RAB19A4D1S5 217 aa8.58□□□□□ -1.04
LINC00173-204ENST00000489452 REG3AQ06141 175 aa8.58□□□□□ -1.04
LINC00173-204ENST00000489452 IQCJQ1A5X6 159 aa8.58□□□□□ -1.04
LINC00173-204ENST00000489452 SUMO4Q6EEV6 95 aa8.58□□□□□ -1.04
LINC00173-204ENST00000489452 FER1L6-AS1Q8NA97 138 aa8.58□□□□□ -1.04
LINC00173-204ENST00000489452 A0A0D9SG52 128 aa8.57□□□□□ -1.04
LINC00173-204ENST00000489452 BCL2L11O43521 198 aa8.57□□□□□ -1.04
LINC00173-204ENST00000489452 ZNF345Q14585 488 aa8.57□□□□□ -1.04
LINC00173-204ENST00000489452 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
LINC00173-204ENST00000489452 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
LINC00173-204ENST00000489452 CLRN3Q8NCR9 226 aa8.57□□□□□ -1.04
LINC00173-204ENST00000489452 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
LINC00173-204ENST00000489452 HMSDA8MTL9 139 aa8.56□□□□□ -1.04
LINC00173-204ENST00000489452 H7C1H1 209 aa8.56□□□□□ -1.04
LINC00173-204ENST00000489452 IGLC6P0CF74 106 aa8.56□□□□□ -1.04
LINC00173-204ENST00000489452 RPS20P60866 119 aaKnown RBP8.56□□□□□ -1.04
LINC00173-204ENST00000489452 TMEM243Q9BU79 118 aa8.56□□□□□ -1.04
LINC00173-204ENST00000489452 GFRA4Q9GZZ7 299 aa8.56□□□□□ -1.04
LINC00173-204ENST00000489452 CACNG7P62955 275 aa8.55□□□□□ -1.04
LINC00173-204ENST00000489452 RASL11AQ6T310 242 aa8.55□□□□□ -1.04
LINC00173-204ENST00000489452 AP5S1Q9NUS5 200 aa8.55□□□□□ -1.04
LINC00173-204ENST00000489452 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 IGKV3OR2-268A0A0C4DH90 116 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 IFNA1P01562 189 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 P01737 135 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 SLPIP03973 132 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 CHTF8P0CG12 524 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 GNG4P50150 75 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 EIF5AP63241 154 aaKnown RBP8.54□□□□□ -1.04
LINC00173-204ENST00000489452 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 C11orf52Q96A22 123 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 MANBALQ9NQG1 85 aa8.54□□□□□ -1.04
LINC00173-204ENST00000489452 IGHV3-64A0A075B6Q5 118 aa8.53□□□□□ -1.04
LINC00173-204ENST00000489452 C19orf71A6NCJ1 209 aa8.53□□□□□ -1.04
LINC00173-204ENST00000489452 UBE2L6O14933 153 aa8.53□□□□□ -1.04
LINC00173-204ENST00000489452 NTF3P20783 257 aa8.53□□□□□ -1.04
LINC00173-204ENST00000489452 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
LINC00173-204ENST00000489452 NIT2Q9NQR4 276 aa8.53□□□□□ -1.04
LINC00173-204ENST00000489452 A0A087WYN8 130 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 235.5 ms