RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 KCNS1Q96KK3 526 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 VGLL1Q99990 258 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 UPK3BQ9BT76 320 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 TPPP3Q9BW30 176 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 NRN1Q9NPD7 142 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 LENEPQ9Y5L5 61 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 OR4C46A6NHA9 309 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 TSTD3H0UI37 97 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 HSBP1O75506 76 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 SCGB1D1O95968 90 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 GZMBP10144 247 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 SLAQ13239 276 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 UNQ9165/PRO28630Q6UXU0 137 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 C9orf47Q6ZRZ4 202 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 FER1L6-AS1Q8NA97 138 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 Q8TAT8 98 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 LINC00477Q96M19 166 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 RHPN1-AS1Q9BWJ2 59 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 PPP1R14DQ9NXH3 145 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 SMPXQ9UHP9 88 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 NEBP20929 6669 aa5.03□□□□□ -1.6
EXOSC3-206ENST00000489414 TMSB15BA0A087X1C1 80 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 F2Z2F3 143 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 ZNF324O75467 553 aaPredicted RBP5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 ARMS2P0C7Q2 107 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 RAB4AP20338 218 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 AMTP48728 403 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 CRIP1P50238 77 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 ERCC8Q13216 396 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 LYZL1Q6UWQ5 148 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 SMIM15Q7Z3B0 74 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 CSNK1G2-AS1Q8NCQ2 148 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 C18orf32Q8TCD1 76 aa5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 ALKBH7Q9BT30 221 aaPredicted RBP5.02□□□□□ -1.61
EXOSC3-206ENST00000489414 TRAV8-2A0A0B4J237 113 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 PRAC2D3DTV9 90 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 NUDT3O95989 172 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 GPX1P07203 203 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 ZNF705DP0CH99 300 aaPredicted RBP5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 ZNF705BP0CI00 300 aaPredicted RBP5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 PMCHP20382 165 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 NTF3P20783 257 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 CTRLP40313 264 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 PKIAP61925 76 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 SNRPD3P62318 126 aaKnown RBP5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 GDF5OSQ5U4N7 250 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 RNASEKQ6P5S7 137 aaKnown RBP5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 CHCHD1Q96BP2 118 aaKnown RBP5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 LINC01600Q96MT4 127 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 AGPAT4-IT1Q9H0P7 198 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 GSN-AS1Q9NRJ2 163 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 DKK2Q9UBU2 259 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 NAGKQ9UJ70 344 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 TNFRSF18Q9Y5U5 241 aa5.01□□□□□ -1.61
EXOSC3-206ENST00000489414 IGKV3-7A0A075B6H7 116 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 TRAV21A0A0B4J279 112 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 TRBV7-9A0A0J9YWB2 115 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 M0R2Z0 102 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 TFPI2P48307 235 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 CACNG7P62955 275 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 TWIST1Q15672 202 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 ZNF493Q6ZR52 646 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 GATD1Q8NB37 220 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 TP53TG3Q9ULZ0 132 aa5□□□□□ -1.61
EXOSC3-206ENST00000489414 TEX48A0A1B0GUV7 120 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 SOCS3O14543 225 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 NUPR1O60356 82 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 PPBPP02775 128 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 OR5AL1P0C617 328 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 IGLC6P0CF74 106 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 CDKN1BP46527 198 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 ZNF80P51504 273 aaPredicted RBP4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 KRTDAPP60985 99 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 EBLN2Q6P2I7 272 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 FA2HQ7L5A8 372 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 NFE4Q86UQ8 179 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 NIT1Q86X76 327 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 ORMDL3Q8N138 153 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 OR8A1Q8NGG7 326 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 PRSS3P2Q8NHM4 247 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 CIRBP-AS1Q8TBR5 109 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 CHAC1Q9BUX1 264 aa4.99□□□□□ -1.61
EXOSC3-206ENST00000489414 C20orf202A1L168 122 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 DUSP14O95147 198 aaKnown RBP4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 LINC00614P0C842 121 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 S100A4P26447 101 aaKnown RBP4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 TSPOP30536 169 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 CKS2P33552 79 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 LEPP41159 167 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 CMC4P56277 68 aaPredicted RBP4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 LINC00310P59036 64 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 SSTP61278 116 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 FAM222AQ5U5X8 452 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 SPANXN1Q5VSR9 72 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 FAM104BQ5XKR9 115 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 C20orf173Q96LM9 149 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 PRELID3AQ96N28 172 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 TMEM191AQ9H0A3 160 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 MS4A6AQ9H2W1 248 aa4.98□□□□□ -1.61
EXOSC3-206ENST00000489414 HSPB8Q9UJY1 196 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms