RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 MAP1LC3B2A6NCE7 125 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 LTAP01374 205 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 AKR1C3P42330 323 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 MIAQ16674 131 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 MPV17L2Q567V2 206 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 CST9LP1Q5W188 147 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 C9orf62Q8N4C0 152 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 NEXN-AS1Q8NBZ9 246 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 STOML3Q8TAV4 291 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 MAP1LC3BQ9GZQ8 125 aa6.07□□□□□ -1.44
SNX17-207ENST00000489402 F5H697 171 aa6.06□□□□□ -1.44
SNX17-207ENST00000489402 FHITP49789 147 aa6.06□□□□□ -1.44
SNX17-207ENST00000489402 TMEM97Q5BJF2 176 aa6.06□□□□□ -1.44
SNX17-207ENST00000489402 DGAT2L7PQ6IED9 249 aa6.06□□□□□ -1.44
SNX17-207ENST00000489402 ZNF471Q9BX82 626 aaPredicted RBP6.06□□□□□ -1.44
SNX17-207ENST00000489402 HMSDA8MTL9 139 aa6.05□□□□□ -1.44
SNX17-207ENST00000489402 PRSS1P07477 247 aa6.05□□□□□ -1.44
SNX17-207ENST00000489402 HNRNPA3P51991 378 aaKnown RBP6.05□□□□□ -1.44
SNX17-207ENST00000489402 RPL19P84098 196 aaKnown RBP6.05□□□□□ -1.44
SNX17-207ENST00000489402 SPANXN1Q5VSR9 72 aa6.05□□□□□ -1.44
SNX17-207ENST00000489402 OR10AG1Q8NH19 301 aa6.05□□□□□ -1.44
SNX17-207ENST00000489402 S100A9P06702 114 aaKnown RBP6.04□□□□□ -1.44
SNX17-207ENST00000489402 CXCL1P09341 107 aa6.04□□□□□ -1.44
SNX17-207ENST00000489402 SMIM17P0DL12 118 aa6.04□□□□□ -1.44
SNX17-207ENST00000489402 PRR27Q6MZM9 219 aa6.04□□□□□ -1.44
SNX17-207ENST00000489402 CLPSL2Q6UWE3 100 aa6.04□□□□□ -1.44
SNX17-207ENST00000489402 C9orf163Q8N9P6 203 aa6.04□□□□□ -1.44
SNX17-207ENST00000489402 TRBV25-1A0A075B6N4 114 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 A0A0D9SG52 128 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 SNAI2O43623 268 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 PAGE4O60829 102 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 OR5AL1P0C617 328 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 RBX1P62877 108 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 GAGE6Q13070 117 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 CLRN3Q8NCR9 226 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 DAZAP1Q96EP5 407 aaKnown RBP6.03□□□□□ -1.44
SNX17-207ENST00000489402 AP1S3Q96PC3 154 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 DERL1Q9BUN8 251 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 PRR34Q9NV39 138 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 VAX2Q9UIW0 290 aa6.03□□□□□ -1.44
SNX17-207ENST00000489402 TNXBP22105 4242 aa6.02□□□□□ -1.45
SNX17-207ENST00000489402 MUC21A0A0G2JKD1 596 aa6.02□□□□□ -1.45
SNX17-207ENST00000489402 MUC21A0A140T8X8 626 aa6.02□□□□□ -1.45
SNX17-207ENST00000489402 PANO1I0J062 215 aa6.02□□□□□ -1.45
SNX17-207ENST00000489402 SSTP61278 116 aa6.02□□□□□ -1.45
SNX17-207ENST00000489402 BAGE2Q86Y30 109 aa6.02□□□□□ -1.45
SNX17-207ENST00000489402 LINC00269Q8N2A0 174 aa6.02□□□□□ -1.45
SNX17-207ENST00000489402 SSBP4Q9BWG4 385 aaPredicted RBP6.02□□□□□ -1.45
SNX17-207ENST00000489402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
SNX17-207ENST00000489402 IGHV1-24A0A0C4DH33 117 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 SCO2A0A1W2PP80 73 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 H7C1H1 209 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 ARPC5O15511 151 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 REG3AQ06141 175 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 SDIM1Q6ZPB5 146 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 Q6ZRU5 148 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 NTM-AS1Q6ZSK4 140 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 SFT2D1Q8WV19 159 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 DPH3Q96FX2 82 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 AP5S1Q9NUS5 200 aa6.01□□□□□ -1.45
SNX17-207ENST00000489402 IGLV10-54A0A075B6I4 117 aa6□□□□□ -1.45
SNX17-207ENST00000489402 TRAV16A0A0A6YYK6 109 aaPredicted RBP6□□□□□ -1.45
SNX17-207ENST00000489402 TRAV8-4A0A0B4J246 113 aa6□□□□□ -1.45
SNX17-207ENST00000489402 hDV102S1A0JD36 115 aa6□□□□□ -1.45
SNX17-207ENST00000489402 P01737 135 aa6□□□□□ -1.45
SNX17-207ENST00000489402 MGPP08493 103 aa6□□□□□ -1.45
SNX17-207ENST00000489402 CNBPP62633 177 aaKnown RBP6□□□□□ -1.45
SNX17-207ENST00000489402 IQCJQ1A5X6 159 aa6□□□□□ -1.45
SNX17-207ENST00000489402 KRTAP26-1Q6PEX3 210 aa6□□□□□ -1.45
SNX17-207ENST00000489402 FAM213BQ8TBF2 198 aa6□□□□□ -1.45
SNX17-207ENST00000489402 MLST8Q9BVC4 326 aa6□□□□□ -1.45
SNX17-207ENST00000489402 IGHV3-64A0A075B6Q5 118 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 A0A1B0GV50 99 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 UMAD1C9J7I0 102 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 ZNF345Q14585 488 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 NDUFA5Q16718 116 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 TEX261Q6UWH6 196 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 TMUB2Q71RG4 321 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 KCNRGQ8N5I3 272 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 CYTL1Q9NRR1 136 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 KIF25-AS1Q9Y6Z4 181 aa5.99□□□□□ -1.45
SNX17-207ENST00000489402 M0QY20 66 aa5.98□□□□□ -1.45
SNX17-207ENST00000489402 GZMBP10144 247 aa5.98□□□□□ -1.45
SNX17-207ENST00000489402 CIRBPQ14011 172 aaKnown RBP5.98□□□□□ -1.45
SNX17-207ENST00000489402 WDR73Q6P4I2 378 aa5.98□□□□□ -1.45
SNX17-207ENST00000489402 MBD3L1Q8WWY6 194 aa5.98□□□□□ -1.45
SNX17-207ENST00000489402 RNF185Q96GF1 192 aa5.98□□□□□ -1.45
SNX17-207ENST00000489402 TMEM243Q9BU79 118 aa5.98□□□□□ -1.45
SNX17-207ENST00000489402 TPPP3Q9BW30 176 aa5.98□□□□□ -1.45
SNX17-207ENST00000489402 DPH3P1Q9H4G8 78 aa5.98□□□□□ -1.45
SNX17-207ENST00000489402 A0A1B0GUV1 79 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 UBE2L6O14933 153 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 H2AFB1P0C5Y9 115 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 MT1HL1P0DM35 61 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 SULT1A2P50226 295 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 RPS20P60866 119 aaKnown RBP5.97□□□□□ -1.45
SNX17-207ENST00000489402 CACNG7P62955 275 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 LRP2P98164 4655 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 ODF1Q14990 250 aa5.97□□□□□ -1.45
SNX17-207ENST00000489402 FER1L6-AS1Q8NA97 138 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms