RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CDC42SE1Q9NRR8 79 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 MON2Q7Z3U7 1717 aa1.65□□□□□ -2.15
PRPF4-203ENST00000488937 COL4A6Q14031 1691 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 SPTBP11277 2137 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 AFDNP55196 1824 aaKnown RBP1.64□□□□□ -2.15
PRPF4-203ENST00000488937 DOCK11Q5JSL3 2073 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 A6NIN4 97 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 H3BRM9 83 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 INE1O15225 51 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 SIX6O95475 246 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 FAM74A1Q5RGS3 127 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 TSLPQ969D9 159 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 IFI27L1Q96BM0 104 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 LIMD2Q9BT23 127 aa1.64□□□□□ -2.15
PRPF4-203ENST00000488937 MRPL36Q9P0J6 103 aaKnown RBP1.64□□□□□ -2.15
PRPF4-203ENST00000488937 IQSEC2Q5JU85 1478 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 TRAV13-2A0A0B4J235 113 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 TRAV12-3A0A0B4J271 114 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 hADV29S1A0JD25 119 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 M0R2N4 97 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 TFF1P04155 84 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 RPL7L1Q6DKI1 246 aaKnown RBP1.63□□□□□ -2.15
PRPF4-203ENST00000488937 DEFB132Q7Z7B7 95 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 COA5Q86WW8 74 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 SPTSSBQ8NFR3 76 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 REG4Q9BYZ8 158 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 DLG5Q8TDM6 1919 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 PLEKHH2Q8IVE3 1493 aa1.63□□□□□ -2.15
PRPF4-203ENST00000488937 LOC285556D6RIA3 1793 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 KIF20BQ96Q89 1820 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 TRBV7-1A0A0A6YYK4 115 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 TRBV6-5A0A0K0K1A5 114 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 TRBV7-7A0A0K0K1E9 115 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 H3BQF6 201 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 GNGT2O14610 69 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 ASIPP42127 132 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 UBE2D1P51668 147 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 ZNF818PQ6ZRF7 136 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 AMELYQ99218 206 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 KLK9Q9UKQ9 250 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 GOLGA3Q08378 1498 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 CDK12Q9NYV4 1490 aaPredicted RBP1.62□□□□□ -2.15
PRPF4-203ENST00000488937 SHANK2Q9UPX8 1470 aa1.62□□□□□ -2.15
PRPF4-203ENST00000488937 PHRF1Q9P1Y6 1649 aaKnown RBP1.62□□□□□ -2.15
PRPF4-203ENST00000488937 RREB1Q92766 1687 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 MAP3K1Q13233 1512 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 KDM5DQ9BY66 1539 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 ARHGEF12Q9NZN5 1544 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 MED13Q9UHV7 2174 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 LOC110117498A0A087WWA1 95 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 CLPSL1A2RUU4 121 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 JMJD7-PLA2G4BH0Y9G9 81 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 PPYP01298 95 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 MPV17LQ2QL34 196 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 TET1Q8NFU7 2136 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 MAGI2Q86UL8 1455 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 CLASP1Q7Z460 1538 aa1.61□□□□□ -2.15
PRPF4-203ENST00000488937 ABCA4P78363 2273 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 ABCC8Q09428 1581 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 SRCAPQ6ZRS2 3230 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 TOP2BQ02880 1626 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 INTS1Q8N201 2190 aaKnown RBP1.6□□□□□ -2.15
PRPF4-203ENST00000488937 MRPS14O60783 128 aaKnown RBP1.6□□□□□ -2.15
PRPF4-203ENST00000488937 MYOZ3Q8TDC0 251 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 PMCHL2Q9BQD1 86 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 BET1LQ9NYM9 111 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 UBR1Q8IWV7 1749 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 LRRIQ1Q96JM4 1722 aa1.6□□□□□ -2.15
PRPF4-203ENST00000488937 SIPA1L3O60292 1781 aaPredicted RBP1.59□□□□□ -2.15
PRPF4-203ENST00000488937 SPAG17Q6Q759 2223 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 TRAV23DV6A0A075B6W5 121 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 NAP1L6A6NFF2 107 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 HIGD1CA8MV81 97 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 K7EP34 96 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 ATOX1O00244 68 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 IGKV1-17P01599 117 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 GYPAP02724 150 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 KRTDAPP60985 99 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 GNG11P61952 73 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 FAM213BQ8TBF2 198 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 CYSTM1Q9H1C7 97 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 MYH4Q9Y623 1939 aa1.59□□□□□ -2.15
PRPF4-203ENST00000488937 PRRC2BQ5JSZ5 2229 aaKnown RBP1.59□□□□□ -2.16
PRPF4-203ENST00000488937 LRRC37A3O60309 1634 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 PDCD11Q14690 1871 aaKnown RBP1.58□□□□□ -2.16
PRPF4-203ENST00000488937 PI4KAP42356 2102 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 CACNA1GO43497 2377 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 CEP162Q5TB80 1403 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 RRBP1Q9P2E9 1410 aaKnown RBP1.58□□□□□ -2.16
PRPF4-203ENST00000488937 CLTCQ00610 1675 aaKnown RBP1.58□□□□□ -2.16
PRPF4-203ENST00000488937 FANCD2Q9BXW9 1451 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 IGLV3-32A0A0A0MS00 114 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 NBDYA0A0U1RRE5 68 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 SFT2D2O95562 160 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 NMBP08949 121 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 TDRG1Q3Y452 100 aa1.58□□□□□ -2.16
PRPF4-203ENST00000488937 LINC00322Q6ZN03 302 aaPredicted RBP1.58□□□□□ -2.16
PRPF4-203ENST00000488937 ZNF625Q96I27 306 aaPredicted RBP1.58□□□□□ -2.16
PRPF4-203ENST00000488937 FAM167A-AS1Q96KT0 104 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms