RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
SPTLC1-207ENST00000488921 RPL36ALQ969Q0 106 aaKnown RBP9.26□□□□□ -0.93
SPTLC1-207ENST00000488921 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
SPTLC1-207ENST00000488921 TRAV8-3A0A0A6YYJ7 113 aa9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 K7EN84 100 aa9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 SNAI2O43623 268 aa9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 RPS20P60866 119 aaKnown RBP9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 RAB4BP61018 213 aa9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 ZNF56Q15929 161 aa9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 SPANXN1Q5VSR9 72 aa9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
SPTLC1-207ENST00000488921 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 KCNIP4Q6PIL6 250 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 OR2D3Q8NGH3 330 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 OR10AG1Q8NH19 301 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 ISOC2Q96AB3 205 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 SSBP4Q9BWG4 385 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 KRTAP4-5Q9BYR2 181 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 RNASE7Q9H1E1 156 aaKnown RBP9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 OSTCQ9NRP0 149 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 Q9UF83 564 aa9.24□□□□□ -0.93
SPTLC1-207ENST00000488921 C19orf71A6NCJ1 209 aa9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 LRCOL1A6NCL2 159 aa9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 GCSHP23434 173 aa9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 OR10G8Q8NGN5 311 aa9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 AP1S3Q96PC3 154 aa9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 CHCHD7Q9BUK0 85 aa9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 RPP21Q9H633 154 aaKnown RBP9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 COX11Q9Y6N1 276 aa9.23□□□□□ -0.93
SPTLC1-207ENST00000488921 ABCA13Q86UQ4 5058 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 PPP1R2P9O14990 202 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 APOC3P02656 99 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 MT-ND4LP03901 98 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 SMIM17P0DL12 118 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 UBE2D3P61077 147 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 UBE2D2P62837 147 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 ELOBQ15370 118 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 C10orf91Q5T1B1 145 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 DAZ4Q86SG3 579 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 Q8N814 137 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 RMI2Q96E14 147 aa9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 DAZ3Q9NR90 486 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 CARHSP1Q9Y2V2 147 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-207ENST00000488921 A0A087WX48 190 aa9.21□□□□□ -0.94
SPTLC1-207ENST00000488921 A8MWL6 223 aa9.21□□□□□ -0.94
SPTLC1-207ENST00000488921 ADCYAP1P18509 176 aa9.21□□□□□ -0.94
SPTLC1-207ENST00000488921 NIT1Q86X76 327 aa9.21□□□□□ -0.94
SPTLC1-207ENST00000488921 SVBPQ8N300 66 aa9.21□□□□□ -0.94
SPTLC1-207ENST00000488921 Q8N3U1 123 aa9.21□□□□□ -0.94
SPTLC1-207ENST00000488921 SNAPINO95295 136 aa9.2□□□□□ -0.94
SPTLC1-207ENST00000488921 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
SPTLC1-207ENST00000488921 ANAPC16Q96DE5 110 aa9.2□□□□□ -0.94
SPTLC1-207ENST00000488921 F5H697 171 aa9.19□□□□□ -0.94
SPTLC1-207ENST00000488921 PKIAP61925 76 aa9.19□□□□□ -0.94
SPTLC1-207ENST00000488921 TMEM97Q5BJF2 176 aa9.19□□□□□ -0.94
SPTLC1-207ENST00000488921 CT83Q5H943 113 aa9.19□□□□□ -0.94
SPTLC1-207ENST00000488921 FER1L6-AS1Q8NA97 138 aa9.19□□□□□ -0.94
SPTLC1-207ENST00000488921 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
SPTLC1-207ENST00000488921 TRBV6-8A0A0A6YYG3 113 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 EPM2AB3EWF7 344 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 F2Z2F3 143 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 IGLC6P0CF74 106 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 CACNG7P62955 275 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 CLRN3Q8NCR9 226 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 BORCS7Q96B45 105 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 TMEM70Q9BUB7 260 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 TPPP3Q9BW30 176 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 CTDSP1Q9GZU7 261 aa9.18□□□□□ -0.94
SPTLC1-207ENST00000488921 H7C1H1 209 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 XGP55808 180 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 SSTP61278 116 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 Q0VG73 95 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 RHEBQ15382 184 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 TSKUQ8WUA8 353 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 GFRA4Q9GZZ7 299 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 RPS10P5Q9NQ39 176 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 KLK12Q9UKR0 248 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 V9GYV3 84 aa9.17□□□□□ -0.94
SPTLC1-207ENST00000488921 IGKV2D-24A0A075B6R9 120 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 C7orf77A4D0Y5 90 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 FAM231BA6NCW3 169 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 TMEM262E9PQX1 116 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 TRGC1P0CF51 173 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 GZMBP10144 247 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 FRZBQ92765 325 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
SPTLC1-207ENST00000488921 CRPP02741 224 aa9.15□□□□□ -0.94
SPTLC1-207ENST00000488921 MGPP08493 103 aa9.15□□□□□ -0.94
SPTLC1-207ENST00000488921 DNAJC30Q96LL9 226 aa9.15□□□□□ -0.94
SPTLC1-207ENST00000488921 NAT8BQ9UHF3 227 aa9.15□□□□□ -0.94
SPTLC1-207ENST00000488921 S100PP25815 95 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms