RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 RPL39LQ96EH5 51 aaKnown RBP4.36□□□□□ -1.71
PTPRD-212ENST00000488774 RNF185Q96GF1 192 aa4.36□□□□□ -1.71
PTPRD-212ENST00000488774 GTSF1LQ9H1H1 148 aa4.36□□□□□ -1.71
PTPRD-212ENST00000488774 DAZ3Q9NR90 486 aaKnown RBP4.36□□□□□ -1.71
PTPRD-212ENST00000488774 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 SMKR1H3BMG3 65 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 GHRHP01286 108 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 MGPP08493 103 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 TAGLN2P37802 199 aaKnown RBP4.35□□□□□ -1.71
PTPRD-212ENST00000488774 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
PTPRD-212ENST00000488774 TIRAPP58753 221 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 ERVFC1-1P60608 527 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 RAB4BP61018 213 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 LELP1Q5T871 98 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 SYT8Q8NBV8 401 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 OR10G8Q8NGN5 311 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 DAZAP1Q96EP5 407 aaKnown RBP4.35□□□□□ -1.71
PTPRD-212ENST00000488774 PRADC1Q9BSG0 188 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 GFRA4Q9GZZ7 299 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 LY96Q9Y6Y9 160 aa4.35□□□□□ -1.71
PTPRD-212ENST00000488774 HIGD1CA8MV81 97 aa4.34□□□□□ -1.71
PTPRD-212ENST00000488774 RHODO00212 210 aa4.34□□□□□ -1.71
PTPRD-212ENST00000488774 NDUFS6O75380 124 aaKnown RBP4.34□□□□□ -1.71
PTPRD-212ENST00000488774 ADIRFQ15847 76 aa4.34□□□□□ -1.71
PTPRD-212ENST00000488774 TMEM241Q24JQ0 296 aa4.34□□□□□ -1.71
PTPRD-212ENST00000488774 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.71
PTPRD-212ENST00000488774 CLLU1Q5K131 121 aa4.34□□□□□ -1.71
PTPRD-212ENST00000488774 NUP35Q8NFH5 326 aa4.34□□□□□ -1.71
PTPRD-212ENST00000488774 OSTCQ9NRP0 149 aa4.34□□□□□ -1.71
PTPRD-212ENST00000488774 ABCA13Q86UQ4 5058 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 TRBV7-3A0A075B6L6 115 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 SMIM27A0A1W2PRY6 76 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 LRCOL1A6NCL2 159 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 F5H697 171 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 NCR2O95944 276 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 RPS20P60866 119 aaKnown RBP4.33□□□□□ -1.72
PTPRD-212ENST00000488774 CACNG7P62955 275 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 TWIST1Q15672 202 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 MPV17L2Q567V2 206 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 OR10J3Q5JRS4 329 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 KRTAP26-1Q6PEX3 210 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 NIT1Q86X76 327 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 AMN1Q8IY45 258 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 Q8N976 141 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 TSKUQ8WUA8 353 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 AP1S3Q96PC3 154 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 Q9HAA7 133 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 NAT8Q9UHE5 227 aa4.33□□□□□ -1.72
PTPRD-212ENST00000488774 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 IGLV4-60A0A075B6I1 120 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 TRBV6-8A0A0A6YYG3 113 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 TRBV10-1A0A0K0K1A3 114 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 A0A1W2PPQ1 181 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 FAM231BA6NCW3 169 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 IBA57-AS1B1ANH7 110 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 F2Z2F3 143 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 CIDEAO60543 219 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 PEA15Q15121 130 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 CT83Q5H943 113 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 SOHLH1Q5JUK2 328 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 WDR73Q6P4I2 378 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 ENHOQ6UWT2 76 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 LINC00336Q6ZUF6 198 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 SPATA12Q7Z6I5 190 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 NRACQ8N912 160 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 NTN5Q8WTR8 489 aaPredicted RBP4.32□□□□□ -1.72
PTPRD-212ENST00000488774 DPH3P1Q9H4G8 78 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
PTPRD-212ENST00000488774 A0A087WTM6 91 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 A0A1B0GXF2 115 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 A8MWL6 223 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 LECT2O14960 151 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 RAB4AP20338 218 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 HAMPP81172 84 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
PTPRD-212ENST00000488774 GAGE6Q13070 117 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 FAM74A3Q4VXF1 159 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 RASL11AQ6T310 242 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 ATRAIDQ6UW56 229 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 CLPSL2Q6UWE3 100 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 RPL36ALQ969Q0 106 aaKnown RBP4.31□□□□□ -1.72
PTPRD-212ENST00000488774 FAM104AQ969W3 186 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
PTPRD-212ENST00000488774 A0A1B0GUT8 65 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 TMEM238LA0A1B0GVL6 79 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 TSHBP01222 138 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 KRTAP10-1P60331 282 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 LINC01620Q4KN68 170 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 MRPL51Q4U2R6 128 aaKnown RBP4.3□□□□□ -1.72
PTPRD-212ENST00000488774 TTC32Q5I0X7 151 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 MRPL54Q6P161 138 aaKnown RBP4.3□□□□□ -1.72
PTPRD-212ENST00000488774 COMMD7Q86VX2 200 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 C20orf203Q8NBC4 194 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 CHCHD7Q9BUK0 85 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 NIT2Q9NQR4 276 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 BIN3Q9NQY0 253 aa4.3□□□□□ -1.72
PTPRD-212ENST00000488774 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-212ENST00000488774 TRAV8-6A0A0B4J262 113 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 IGKV2-29A2NJV5 120 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms