RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 UBE2G1P62253 170 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 C9orf116Q5BN46 136 aaPredicted RBP0.38□□□□□ -2.35
CD46-215ENST00000488596 MEIG1Q5JSS6 88 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 FAM74A4Q5TZK3 123 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 C20orf197Q8N268 126 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.38□□□□□ -2.35
CD46-215ENST00000488596 SEC11CQ9BY50 192 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 APCP25054 2843 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 PRDM2Q13029 1718 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 LRRC37A3O60309 1634 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 NCOA3Q9Y6Q9 1424 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 BDP1A6H8Y1 2624 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 POLQO75417 2590 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 A0A1B0GV90 55 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 MIF4GDA9UHW6 222 aaKnown RBP0.37□□□□□ -2.35
CD46-215ENST00000488596 DLEU1O43261 78 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 PRH1P02810 166 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 UBE2D1P51668 147 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 ELOF1P60002 83 aaKnown RBP0.37□□□□□ -2.35
CD46-215ENST00000488596 SSBP1Q04837 148 aaKnown RBP0.37□□□□□ -2.35
CD46-215ENST00000488596 C12orf73Q69YU5 71 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 Q6AWC8 147 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 C4orf33Q8N1A6 199 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 SPTSSBQ8NFR3 76 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 COX7B2Q8TF08 81 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 AGPAT4-IT1Q9H0P7 198 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 RERGLQ9H628 205 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 NAA60Q9H7X0 242 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 SERP1Q9Y6X1 66 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 ARAP2Q8WZ64 1704 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 PIEZO1Q92508 2521 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 CACNA1EQ15878 2313 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 SMG6Q86US8 1419 aaKnown RBP0.37□□□□□ -2.35
CD46-215ENST00000488596 CASKIN1Q8WXD9 1431 aa0.37□□□□□ -2.35
CD46-215ENST00000488596 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 A2ML1A8K2U0 1454 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 IFT140Q96RY7 1462 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 ZFHX3Q15911 3703 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 IFT172Q9UG01 1749 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 SHROOM2Q13796 1616 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 A0A087WTM6 91 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 A0A096LNT2 108 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 PIGBOS1A0A0B4J2F0 54 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 LOC100130705A0A1B0GUX0 176 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 SPAARA0A1B0GVQ0 90 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 MCRIP1C9JLW8 97 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 F2Z2F3 143 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 APOC4-APOC2K7ER74 178 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 AKAIN1P0CW23 69 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 FGF7P21781 194 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 BTG2P78543 158 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 ZNF818PQ6ZRF7 136 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 LSM10Q969L4 123 aaKnown RBP0.36□□□□□ -2.35
CD46-215ENST00000488596 V9GYV3 84 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 FAM135AQ9P2D6 1515 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 ROBO1Q9Y6N7 1651 aa0.36□□□□□ -2.35
CD46-215ENST00000488596 MYOM2P54296 1465 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 PXDNQ92626 1479 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 F8P00451 2351 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 KTN1Q86UP2 1357 aaKnown RBP0.35□□□□□ -2.35
CD46-215ENST00000488596 CDK13Q14004 1512 aaKnown RBP0.35□□□□□ -2.35
CD46-215ENST00000488596 TTC28Q96AY4 2481 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 RIMS1Q86UR5 1692 aaKnown RBP0.35□□□□□ -2.35
CD46-215ENST00000488596 TRBV7-1A0A0A6YYK4 115 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 TRAV13-2A0A0B4J235 113 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 CLPSL1A2RUU4 121 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 EDDM3BP56851 147 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 CCL8P80075 99 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 RBM3P98179 157 aaKnown RBP0.35□□□□□ -2.35
CD46-215ENST00000488596 INSL4Q14641 139 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 Q56UQ5 140 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 Q8N8P6 123 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 C2orf88Q9BSF0 95 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 BPESC1Q9GZL8 116 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 PSME4Q14997 1843 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 NRKQ7Z2Y5 1582 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 LAMC3Q9Y6N6 1575 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 MEGF8Q7Z7M0 2845 aa0.35□□□□□ -2.35
CD46-215ENST00000488596 KCPQ6ZWJ8 1503 aa0.34□□□□□ -2.35
CD46-215ENST00000488596 TET3O43151 1660 aa0.34□□□□□ -2.35
CD46-215ENST00000488596 SSC5DA1L4H1 1573 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 LINC00587B1AMM8 73 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 HCG22E2RYF7 251 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 SNAPC5O75971 98 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 APOC2P02655 101 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 ACYP2P14621 99 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 CPSF1Q10570 1443 aaKnown RBP0.34□□□□□ -2.36
CD46-215ENST00000488596 CATR1Q13166 79 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 NAV2Q8IVL1 2488 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 SMIM11BQ8TCY0 68 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 PP6455Q8WZ26 134 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 TMEM203Q969S6 136 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 AQP10Q96PS8 301 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 SMR3AQ99954 134 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 FAM103A1Q9BTL3 118 aaKnown RBP0.34□□□□□ -2.36
CD46-215ENST00000488596 PRR15LQ9BU68 103 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 LINC00312Q9Y6C7 94 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 ASXL3Q9C0F0 2248 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms