RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MYL12BO14950 172 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 SLC25A5P05141 298 aaKnown RBP2.62□□□□□ -1.99
BRCA1-217ENST00000487825 GIPP09681 153 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-217ENST00000487825 OR10J4P0C629 311 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 PFN2P35080 140 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 CCR6P51684 374 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 TAS2R20P59543 309 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 MT1HP80294 61 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 BAXQ07812 192 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 TPRXLQ17RH7 258 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 ZFP1Q6P2D0 407 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 OR10G9Q8NGN4 311 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 UBE2WQ96B02 151 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 SIGMAR1Q99720 223 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 SEC22CQ9BRL7 303 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 CCDC90BQ9GZT6 254 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 FXYD6Q9H0Q3 95 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 TMEM222Q9H0R3 208 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 ATG5Q9H1Y0 275 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 POMPQ9Y244 141 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 V9GY05 133 aa2.62□□□□□ -1.99
BRCA1-217ENST00000487825 IGLV1-50A0A075B6I6 118 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 F8W036 122 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 H3BRN7 92 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 TCAPO15273 167 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 UPK1BO75841 260 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 ARL6IP5O75915 188 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 CFDP00746 253 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-217ENST00000487825 HLA-DQA1P01909 254 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 RPL7P18124 248 aaKnown RBP2.61□□□□□ -1.99
BRCA1-217ENST00000487825 AKR1C2P52895 323 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 RAB5BP61020 215 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 Q0VG73 95 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 BTN1A1Q13410 526 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 PPP1R1AQ13522 171 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 NMSQ5H8A3 153 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 C1orf195Q5TG92 126 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 TMEM91Q6ZNR0 172 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 SLC25A29Q8N8R3 303 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 TRGV9Q99603 122 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 SH3BGRL3Q9H299 93 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 ARV1Q9H2C2 271 aa2.61□□□□□ -1.99
BRCA1-217ENST00000487825 ZNF331Q9NQX6 463 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-217ENST00000487825 A0A0G2JRQ6 117 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 LOC100130705A0A1B0GUX0 176 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 CRYM-AS1A6NIL9 109 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 IFITM5A6NNB3 132 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 LINC00587B1AMM8 73 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 E9PLD3 99 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 GABARAPH6UMI1 98 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 GABARAPO95166 117 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 CXCL2P19875 107 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 S100GP29377 79 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 S100A7P31151 101 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 RAB2AP61019 212 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 MXD1Q05195 221 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 RHOHQ15669 191 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 TMEM183BQ1AE95 376 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 FAM162BQ5T6X4 162 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 Q6ZQT7 251 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 COMMD7Q86VX2 200 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 TMEM183AQ8IXX5 376 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 TMEM75Q8N9X5 138 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 LHFPL5Q8TAF8 219 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 FAM19A4Q96LR4 140 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 SLC50A1Q9BRV3 221 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 PRADC1Q9BSG0 188 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 CHCHD7Q9BUK0 85 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 TMEM147Q9BVK8 224 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 GSKIPQ9P0R6 139 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 AP4S1Q9Y587 144 aa2.6□□□□□ -1.99
BRCA1-217ENST00000487825 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.59□□□□□ -1.99
BRCA1-217ENST00000487825 TRAV8-4A0A0B4J246 113 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 A0A0B4J2A0 478 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 TRBV6-4A0A1B0GX49 114 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 IGSF23A1L1A6 192 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 P01737 135 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 OR5G3P0C626 314 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 LINC00694P0DN24 101 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 ORM2P19652 201 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 RPL29P47914 159 aaKnown RBP2.59□□□□□ -1.99
BRCA1-217ENST00000487825 IFITM2Q01629 132 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 ELOBQ15370 118 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 KRTAP19-2Q3LHN2 52 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 ENHOQ6UWT2 76 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 LCN15Q6UWW0 184 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 MRPL55Q7Z7F7 128 aaKnown RBP2.59□□□□□ -1.99
BRCA1-217ENST00000487825 OR13C6PQ8NH95 151 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 PFDN5Q99471 154 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 C2orf88Q9BSF0 95 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 SHANK2-AS3Q9BTD1 123 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 SHPKQ9UHJ6 478 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 SSR3Q9UNL2 185 aa2.59□□□□□ -1.99
BRCA1-217ENST00000487825 C14orf166Q9Y224 244 aaKnown RBP2.59□□□□□ -1.99
BRCA1-217ENST00000487825 CARHSP1Q9Y2V2 147 aaKnown RBP2.59□□□□□ -1.99
BRCA1-217ENST00000487825 A0A087WWC5 75 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 TRAV1-1A0A0B4J248 108 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms