RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 Q9UF83 564 aa9.28□□□□□ -0.92
HSPG2-211ENST00000486901 TRAV8-3A0A0A6YYJ7 113 aa9.28□□□□□ -0.92
HSPG2-211ENST00000486901 COX6B1P14854 86 aa9.28□□□□□ -0.92
HSPG2-211ENST00000486901 PROK1P58294 105 aa9.28□□□□□ -0.92
HSPG2-211ENST00000486901 C5orf56Q8N8D9 126 aa9.28□□□□□ -0.92
HSPG2-211ENST00000486901 NF1P21359 2839 aa9.28□□□□□ -0.92
HSPG2-211ENST00000486901 SPINK13Q1W4C9 94 aa9.28□□□□□ -0.92
HSPG2-211ENST00000486901 J3QQQ9 107 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 UBE2D1P51668 147 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 HERVK_113P61574 105 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 SRSF2Q01130 221 aaKnown RBP9.27□□□□□ -0.93
HSPG2-211ENST00000486901 PSMG4Q5JS54 123 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 MINOS1Q5TGZ0 78 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 NTN5Q8WTR8 489 aaPredicted RBP9.27□□□□□ -0.93
HSPG2-211ENST00000486901 IGHV4-38-2P0DP08 117 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 TRBV7-1A0A0A6YYK4 115 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 B5MCH6 92 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 PMVKQ15126 192 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 ANAPC13Q9BS18 74 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 MINOS1-NBL1R4GNA1 71 aa9.27□□□□□ -0.93
HSPG2-211ENST00000486901 H3BUX3 64 aa9.26□□□□□ -0.93
HSPG2-211ENST00000486901 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-211ENST00000486901 CRLF1O75462 422 aa9.26□□□□□ -0.93
HSPG2-211ENST00000486901 UBE2E1P51965 193 aa9.26□□□□□ -0.93
HSPG2-211ENST00000486901 MXRA5Q9NR99 2828 aa9.26□□□□□ -0.93
HSPG2-211ENST00000486901 EBI3Q14213 229 aa9.26□□□□□ -0.93
HSPG2-211ENST00000486901 ITLN2Q8WWU7 325 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-211ENST00000486901 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 SLC25A20O43772 301 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 IGHV3-30P01768 117 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 IGHV3-30-5P0DP03 117 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 TEN1Q86WV5 123 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 PRO1854Q9UHT4 67 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 CHD6Q8TD26 2715 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 NBL1P41271 181 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 PPDPFLQ8WWR9 84 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 ZNF625Q96I27 306 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-211ENST00000486901 C10orf126Q8N4M7 172 aa9.25□□□□□ -0.93
HSPG2-211ENST00000486901 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
HSPG2-211ENST00000486901 IGHV3-38A0A0C4DH36 116 aa9.24□□□□□ -0.93
HSPG2-211ENST00000486901 ZNF876PQ49A33 203 aa9.24□□□□□ -0.93
HSPG2-211ENST00000486901 C11orf71Q6IPW1 123 aa9.24□□□□□ -0.93
HSPG2-211ENST00000486901 DUX3Q96PT4 197 aa9.24□□□□□ -0.93
HSPG2-211ENST00000486901 IGSF10Q6WRI0 2623 aa9.24□□□□□ -0.93
HSPG2-211ENST00000486901 IGHV4-4A0A075B6R2 117 aa9.24□□□□□ -0.93
HSPG2-211ENST00000486901 LINC00315P59091 139 aa9.24□□□□□ -0.93
HSPG2-211ENST00000486901 TRAV4A0A0B4J268 109 aa9.23□□□□□ -0.93
HSPG2-211ENST00000486901 UBE2D3P61077 147 aa9.23□□□□□ -0.93
HSPG2-211ENST00000486901 UBE2D2P62837 147 aa9.23□□□□□ -0.93
HSPG2-211ENST00000486901 SCGB1A1P11684 91 aa9.23□□□□□ -0.93
HSPG2-211ENST00000486901 U3KQE9 123 aa9.23□□□□□ -0.93
HSPG2-211ENST00000486901 C19orf84I3L1E1 186 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 LMO4P61968 165 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 Q8N1Y9 231 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 ERG28Q9UKR5 140 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 USP24Q9UPU5 2620 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 VCYO14598 125 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 OVOL1O14753 267 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 CLEC2BQ92478 149 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
HSPG2-211ENST00000486901 TTC32Q5I0X7 151 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 SLC25A29Q8N8R3 303 aa9.22□□□□□ -0.93
HSPG2-211ENST00000486901 TEP1Q99973 2627 aaKnown RBP9.21□□□□□ -0.94
HSPG2-211ENST00000486901 IGHV3-16A0A0C4DH30 117 aa9.21□□□□□ -0.94
HSPG2-211ENST00000486901 TEX29Q8N6K0 151 aa9.21□□□□□ -0.94
HSPG2-211ENST00000486901 MOB4Q9Y3A3 225 aa9.21□□□□□ -0.94
HSPG2-211ENST00000486901 POLR2KP53803 58 aaKnown RBP9.2□□□□□ -0.94
HSPG2-211ENST00000486901 KIF25-AS1Q9Y6Z4 181 aa9.2□□□□□ -0.94
HSPG2-211ENST00000486901 OOSP1A8MZH6 123 aa9.2□□□□□ -0.94
HSPG2-211ENST00000486901 SOCS3O14543 225 aa9.2□□□□□ -0.94
HSPG2-211ENST00000486901 VCX2Q9H322 139 aa9.2□□□□□ -0.94
HSPG2-211ENST00000486901 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
HSPG2-211ENST00000486901 CCL19Q99731 98 aa9.19□□□□□ -0.94
HSPG2-211ENST00000486901 IGHV4-61A0A0C4DH41 118 aa9.19□□□□□ -0.94
HSPG2-211ENST00000486901 TCTEX1D4Q5JR98 221 aa9.19□□□□□ -0.94
HSPG2-211ENST00000486901 TEX15Q9BXT5 2789 aa9.19□□□□□ -0.94
HSPG2-211ENST00000486901 IGHV3-33P01772 117 aa9.19□□□□□ -0.94
HSPG2-211ENST00000486901 UCNP55089 124 aa9.19□□□□□ -0.94
HSPG2-211ENST00000486901 AMELXQ99217 191 aa9.19□□□□□ -0.94
HSPG2-211ENST00000486901 FLNAP21333 2647 aaKnown RBP9.19□□□□□ -0.94
HSPG2-211ENST00000486901 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.18□□□□□ -0.94
HSPG2-211ENST00000486901 IGKV2-29A2NJV5 120 aaPredicted RBP9.18□□□□□ -0.94
HSPG2-211ENST00000486901 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
HSPG2-211ENST00000486901 CD28P10747 220 aa9.18□□□□□ -0.94
HSPG2-211ENST00000486901 MRPL53Q96EL3 112 aaKnown RBP9.18□□□□□ -0.94
HSPG2-211ENST00000486901 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
HSPG2-211ENST00000486901 SYNJ2BPP57105 145 aa9.18□□□□□ -0.94
HSPG2-211ENST00000486901 HIST2H2BCQ6DN03 193 aa9.18□□□□□ -0.94
HSPG2-211ENST00000486901 TMEM190Q8WZ59 177 aa9.18□□□□□ -0.94
HSPG2-211ENST00000486901 NBEAL2Q6ZNJ1 2754 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 ITPR3Q14573 2671 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 NDUFA4O00483 81 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 TRIAP1O43715 76 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 SNCGO76070 127 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 DAZ1Q9NQZ3 744 aaKnown RBP9.17□□□□□ -0.94
HSPG2-211ENST00000486901 IGHV3OR16-12A0A075B7B8 117 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 A0A1W2PRX2 142 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms