RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 K7ERJ3 54 aa10□□□□□ -0.81
HMGN1-216ENST00000486741 DEFB125Q8N687 156 aa10□□□□□ -0.81
HMGN1-216ENST00000486741 SCGB1A1P11684 91 aa10□□□□□ -0.81
HMGN1-216ENST00000486741 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
HMGN1-216ENST00000486741 ZNF493Q6ZR52 646 aa10□□□□□ -0.81
HMGN1-216ENST00000486741 AGRNO00468 2067 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 A8MWV9 139 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 SRSF2Q01130 221 aaKnown RBP9.99□□□□□ -0.81
HMGN1-216ENST00000486741 CFAP46Q8IYW2 2715 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 H3BMG7 143 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 H3BRM9 83 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 PIFOQ8TCI5 191 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 PRM2P04554 102 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-216ENST00000486741 ZFAND2AQ8N6M9 145 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 C20orf78Q9BR46 151 aa9.99□□□□□ -0.81
HMGN1-216ENST00000486741 COL12A1Q99715 3063 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 A0A0J9YX75 114 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 PMVKQ15126 192 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 SH2D6Q7Z4S9 175 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 GATD1Q8NB37 220 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 I3L3M4 83 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 SMIM20Q8N5G0 67 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 U3KQE9 123 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 TACC2O95359 2948 aa9.98□□□□□ -0.81
HMGN1-216ENST00000486741 C11orf68Q9H3H3 251 aaKnown RBP9.98□□□□□ -0.81
HMGN1-216ENST00000486741 A0A087WX48 190 aa9.97□□□□□ -0.81
HMGN1-216ENST00000486741 TAX1BP3O14907 124 aa9.97□□□□□ -0.81
HMGN1-216ENST00000486741 HLA-DRB4P13762 266 aa9.97□□□□□ -0.81
HMGN1-216ENST00000486741 Q6YL49 198 aa9.97□□□□□ -0.81
HMGN1-216ENST00000486741 HLA-DRB4X5D2U9 266 aa9.97□□□□□ -0.81
HMGN1-216ENST00000486741 SPATA12Q7Z6I5 190 aa9.97□□□□□ -0.81
HMGN1-216ENST00000486741 LRBAP50851 2863 aa9.97□□□□□ -0.81
HMGN1-216ENST00000486741 A0A1W2PPM0 123 aa9.96□□□□□ -0.81
HMGN1-216ENST00000486741 DNAJC9-AS1A6NH13 148 aa9.96□□□□□ -0.81
HMGN1-216ENST00000486741 CRYBA4P53673 196 aa9.96□□□□□ -0.81
HMGN1-216ENST00000486741 CLUHP3Q96NS8 147 aa9.96□□□□□ -0.81
HMGN1-216ENST00000486741 NOP10Q9NPE3 64 aaKnown RBP9.96□□□□□ -0.81
HMGN1-216ENST00000486741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-216ENST00000486741 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-216ENST00000486741 URB1-AS1Q96HZ7 61 aa9.96□□□□□ -0.82
HMGN1-216ENST00000486741 SCRT2Q9NQ03 307 aa9.96□□□□□ -0.82
HMGN1-216ENST00000486741 COL27A1Q8IZC6 1860 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-216ENST00000486741 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-216ENST00000486741 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
HMGN1-216ENST00000486741 A0A096LPF7 62 aa9.95□□□□□ -0.82
HMGN1-216ENST00000486741 PSMB8P28062 276 aa9.95□□□□□ -0.82
HMGN1-216ENST00000486741 OR13C6PQ8NH95 151 aa9.95□□□□□ -0.82
HMGN1-216ENST00000486741 P0DMU3 169 aa9.95□□□□□ -0.82
HMGN1-216ENST00000486741 FAM231AP0DMU4 169 aa9.95□□□□□ -0.82
HMGN1-216ENST00000486741 FAM231CP0DMU5 169 aa9.95□□□□□ -0.82
HMGN1-216ENST00000486741 RNF185Q96GF1 192 aa9.95□□□□□ -0.82
HMGN1-216ENST00000486741 M0R2P5 195 aa9.94□□□□□ -0.82
HMGN1-216ENST00000486741 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
HMGN1-216ENST00000486741 TRBV25-1A0A075B6N4 114 aa9.94□□□□□ -0.82
HMGN1-216ENST00000486741 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
HMGN1-216ENST00000486741 TRBV20-1A0A075B6N2 111 aa9.93□□□□□ -0.82
HMGN1-216ENST00000486741 ODF1Q14990 250 aa9.93□□□□□ -0.82
HMGN1-216ENST00000486741 K7EQG2 157 aa9.93□□□□□ -0.82
HMGN1-216ENST00000486741 FLNCQ14315 2725 aa9.93□□□□□ -0.82
HMGN1-216ENST00000486741 MYMXA0A1B0GTQ4 84 aa9.93□□□□□ -0.82
HMGN1-216ENST00000486741 RASL10AQ92737 203 aa9.93□□□□□ -0.82
HMGN1-216ENST00000486741 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
HMGN1-216ENST00000486741 SPAG8Q99932 426 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-216ENST00000486741 C1QTNF4Q9BXJ3 329 aa9.93□□□□□ -0.82
HMGN1-216ENST00000486741 LINC01549A6NIU2 74 aa9.92□□□□□ -0.82
HMGN1-216ENST00000486741 RHODO00212 210 aa9.92□□□□□ -0.82
HMGN1-216ENST00000486741 LAMA5O15230 3695 aa9.92□□□□□ -0.82
HMGN1-216ENST00000486741 A0A0J9YXV3 536 aa9.92□□□□□ -0.82
HMGN1-216ENST00000486741 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
HMGN1-216ENST00000486741 Q6ZSV7 163 aa9.92□□□□□ -0.82
HMGN1-216ENST00000486741 ZNF702PQ9H963 129 aa9.92□□□□□ -0.82
HMGN1-216ENST00000486741 DCHS1Q96JQ0 3298 aa9.92□□□□□ -0.82
HMGN1-216ENST00000486741 FLNAP21333 2647 aaKnown RBP9.92□□□□□ -0.82
HMGN1-216ENST00000486741 CEMP1Q6PRD7 247 aaPredicted RBP9.91□□□□□ -0.82
HMGN1-216ENST00000486741 WFDC2Q14508 124 aa9.91□□□□□ -0.82
HMGN1-216ENST00000486741 TMEM141Q96I45 108 aa9.91□□□□□ -0.82
HMGN1-216ENST00000486741 TRAV8-4A0A0B4J246 113 aa9.9□□□□□ -0.82
HMGN1-216ENST00000486741 RNASE1P07998 156 aaKnown RBP9.9□□□□□ -0.82
HMGN1-216ENST00000486741 CMC4P56277 68 aaPredicted RBP9.9□□□□□ -0.82
HMGN1-216ENST00000486741 GAGE6Q13070 117 aa9.9□□□□□ -0.82
HMGN1-216ENST00000486741 FXYD2P54710 66 aa9.9□□□□□ -0.83
HMGN1-216ENST00000486741 PLEKHB2Q96CS7 222 aa9.9□□□□□ -0.83
HMGN1-216ENST00000486741 Q8N976 141 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 MAP6D1Q9H9H5 199 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 ESM1Q9NQ30 184 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 J3QQQ9 107 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 PROK1P58294 105 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 BAALCQ8WXS3 180 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 ITPR3Q14573 2671 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 F8W1H4 67 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 G3V4G9 280 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 ERG28Q9UKR5 140 aa9.89□□□□□ -0.83
HMGN1-216ENST00000486741 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
HMGN1-216ENST00000486741 C9JAW5 83 aa9.88□□□□□ -0.83
HMGN1-216ENST00000486741 RNASE3P12724 160 aaKnown RBP9.88□□□□□ -0.83
HMGN1-216ENST00000486741 C4orf3Q8WVX3 66 aa9.88□□□□□ -0.83
HMGN1-216ENST00000486741 IGKV2D-26A0A0A0MRZ7 120 aa9.88□□□□□ -0.83
HMGN1-216ENST00000486741 PRIMA1Q86XR5 153 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms