RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 KCNIP4Q6PIL6 250 aa12.23□□□□□ -0.45
CLDN11-206ENST00000486429 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
CLDN11-206ENST00000486429 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
CLDN11-206ENST00000486429 CHCHD7Q9BUK0 85 aa12.23□□□□□ -0.45
CLDN11-206ENST00000486429 NUDT10Q8NFP7 164 aa12.22□□□□□ -0.45
CLDN11-206ENST00000486429 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
CLDN11-206ENST00000486429 RPP21Q9H633 154 aaKnown RBP12.22□□□□□ -0.45
CLDN11-206ENST00000486429 TRBV6-8A0A0A6YYG3 113 aa12.21□□□□□ -0.45
CLDN11-206ENST00000486429 H7C1H1 209 aa12.21□□□□□ -0.45
CLDN11-206ENST00000486429 K7EN84 100 aa12.21□□□□□ -0.45
CLDN11-206ENST00000486429 TRGC1P0CF51 173 aa12.21□□□□□ -0.45
CLDN11-206ENST00000486429 CTRLP40313 264 aa12.21□□□□□ -0.45
CLDN11-206ENST00000486429 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.45
CLDN11-206ENST00000486429 OCC1Q8TAD7 63 aa12.21□□□□□ -0.45
CLDN11-206ENST00000486429 KRTAP17-1Q9BYP8 105 aa12.21□□□□□ -0.45
CLDN11-206ENST00000486429 RNASE7Q9H1E1 156 aaKnown RBP12.21□□□□□ -0.45
CLDN11-206ENST00000486429 ELOBQ15370 118 aa12.2□□□□□ -0.46
CLDN11-206ENST00000486429 Q8N814 137 aa12.2□□□□□ -0.46
CLDN11-206ENST00000486429 NTN5Q8WTR8 489 aaPredicted RBP12.2□□□□□ -0.46
CLDN11-206ENST00000486429 RMI2Q96E14 147 aa12.2□□□□□ -0.46
CLDN11-206ENST00000486429 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
CLDN11-206ENST00000486429 IGLV5-52A0A0A0MRZ9 124 aa12.19□□□□□ -0.46
CLDN11-206ENST00000486429 CEBPGP53567 150 aa12.19□□□□□ -0.46
CLDN11-206ENST00000486429 TMEM97Q5BJF2 176 aa12.19□□□□□ -0.46
CLDN11-206ENST00000486429 SUMO4Q6EEV6 95 aa12.19□□□□□ -0.46
CLDN11-206ENST00000486429 COX11Q9Y6N1 276 aa12.19□□□□□ -0.46
CLDN11-206ENST00000486429 M0QY20 66 aa12.18□□□□□ -0.46
CLDN11-206ENST00000486429 EIF5A2Q9GZV4 153 aaKnown RBP12.18□□□□□ -0.46
CLDN11-206ENST00000486429 DPH3P1Q9H4G8 78 aa12.18□□□□□ -0.46
CLDN11-206ENST00000486429 ABCA13Q86UQ4 5058 aa12.18□□□□□ -0.46
CLDN11-206ENST00000486429 TMEM262E9PQX1 116 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 NTF3P20783 257 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 GCSHP23434 173 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 KRTAP10-1P60331 282 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 PKIAP61925 76 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 WDR73Q6P4I2 378 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 UBE2WQ96B02 151 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 CHCHD5Q9BSY4 110 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
CLDN11-206ENST00000486429 IGKV2D-24A0A075B6R9 120 aa12.16□□□□□ -0.46
CLDN11-206ENST00000486429 FAM210AQ96ND0 272 aa12.16□□□□□ -0.46
CLDN11-206ENST00000486429 KRTAP4-5Q9BYR2 181 aa12.16□□□□□ -0.46
CLDN11-206ENST00000486429 CRPP02741 224 aa12.15□□□□□ -0.46
CLDN11-206ENST00000486429 WFDC2Q14508 124 aa12.15□□□□□ -0.46
CLDN11-206ENST00000486429 TWIST1Q15672 202 aa12.15□□□□□ -0.46
CLDN11-206ENST00000486429 MPV17L2Q567V2 206 aa12.15□□□□□ -0.46
CLDN11-206ENST00000486429 RASL11AQ6T310 242 aa12.15□□□□□ -0.46
CLDN11-206ENST00000486429 FAM231DQ6ZW35 169 aa12.15□□□□□ -0.46
CLDN11-206ENST00000486429 Q8N1X5 172 aa12.15□□□□□ -0.46
CLDN11-206ENST00000486429 SMIM7Q9BQ49 75 aa12.15□□□□□ -0.46
CLDN11-206ENST00000486429 TRBV25-1A0A075B6N4 114 aa12.14□□□□□ -0.47
CLDN11-206ENST00000486429 GATCO43716 136 aaKnown RBP12.14□□□□□ -0.47
CLDN11-206ENST00000486429 NDUFS6O75380 124 aaKnown RBP12.14□□□□□ -0.47
CLDN11-206ENST00000486429 NTM-AS1Q6ZSK4 140 aa12.14□□□□□ -0.47
CLDN11-206ENST00000486429 C15orf54Q8N8G6 183 aa12.14□□□□□ -0.47
CLDN11-206ENST00000486429 LECT2O14960 151 aa12.13□□□□□ -0.47
CLDN11-206ENST00000486429 IFITM2Q01629 132 aa12.13□□□□□ -0.47
CLDN11-206ENST00000486429 Q0VG73 95 aa12.13□□□□□ -0.47
CLDN11-206ENST00000486429 GTSF1Q8WW33 167 aa12.13□□□□□ -0.47
CLDN11-206ENST00000486429 IGHV1-24A0A0C4DH33 117 aa12.12□□□□□ -0.47
CLDN11-206ENST00000486429 ANGP03950 147 aaKnown RBP12.12□□□□□ -0.47
CLDN11-206ENST00000486429 IQCJQ1A5X6 159 aa12.12□□□□□ -0.47
CLDN11-206ENST00000486429 CT83Q5H943 113 aa12.12□□□□□ -0.47
CLDN11-206ENST00000486429 ATRAIDQ6UW56 229 aa12.12□□□□□ -0.47
CLDN11-206ENST00000486429 ZNF727A8MUV8 499 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 A8MWL6 223 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 SRP19P09132 144 aaKnown RBP12.11□□□□□ -0.47
CLDN11-206ENST00000486429 TEX261Q6UWH6 196 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 SMIM15Q7Z3B0 74 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 Q8N976 141 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 BAALCQ8WXS3 180 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 C1orf43Q9BWL3 253 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
CLDN11-206ENST00000486429 XGP55808 180 aa12.1□□□□□ -0.47
CLDN11-206ENST00000486429 GAGE6Q13070 117 aa12.1□□□□□ -0.47
CLDN11-206ENST00000486429 ENHOQ6UWT2 76 aa12.09□□□□□ -0.47
CLDN11-206ENST00000486429 BORCS7Q96B45 105 aa12.09□□□□□ -0.47
CLDN11-206ENST00000486429 PGLYRP4Q96LB8 373 aa12.09□□□□□ -0.47
CLDN11-206ENST00000486429 TMEM70Q9BUB7 260 aa12.09□□□□□ -0.47
CLDN11-206ENST00000486429 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.08□□□□□ -0.48
CLDN11-206ENST00000486429 RBX1P62877 108 aa12.08□□□□□ -0.48
CLDN11-206ENST00000486429 FRZBQ92765 325 aa12.08□□□□□ -0.48
CLDN11-206ENST00000486429 TRAV26-2A0A0B4J265 109 aa12.07□□□□□ -0.48
CLDN11-206ENST00000486429 MIAQ16674 131 aa12.07□□□□□ -0.48
CLDN11-206ENST00000486429 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
CLDN11-206ENST00000486429 TMEM243Q9BU79 118 aa12.07□□□□□ -0.48
CLDN11-206ENST00000486429 COTL1Q14019 142 aa12.06□□□□□ -0.48
CLDN11-206ENST00000486429 CLPSL2Q6UWE3 100 aa12.06□□□□□ -0.48
CLDN11-206ENST00000486429 TSKUQ8WUA8 353 aa12.06□□□□□ -0.48
CLDN11-206ENST00000486429 OSTCQ9NRP0 149 aa12.06□□□□□ -0.48
CLDN11-206ENST00000486429 AMTP48728 403 aa12.05□□□□□ -0.48
CLDN11-206ENST00000486429 FOXA3P55318 350 aaPredicted RBP12.05□□□□□ -0.48
CLDN11-206ENST00000486429 GFRA4Q9GZZ7 299 aa12.05□□□□□ -0.48
CLDN11-206ENST00000486429 PRR34Q9NV39 138 aa12.05□□□□□ -0.48
CLDN11-206ENST00000486429 HIGD1CA8MV81 97 aa12.04□□□□□ -0.48
CLDN11-206ENST00000486429 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
CLDN11-206ENST00000486429 HLA-DQA1P01909 254 aa12.04□□□□□ -0.48
CLDN11-206ENST00000486429 FAM74A3Q4VXF1 159 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms