RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 LYZL1Q6UWQ5 148 aa13.03□□□□□ -0.32
SNX5-213ENST00000486039 RNASE7Q9H1E1 156 aaKnown RBP13.03□□□□□ -0.32
SNX5-213ENST00000486039 F2Z2F3 143 aa13.02□□□□□ -0.33
SNX5-213ENST00000486039 TMEM250H0YL14 139 aa13.02□□□□□ -0.33
SNX5-213ENST00000486039 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
SNX5-213ENST00000486039 TRAV8-3A0A0A6YYJ7 113 aa13□□□□□ -0.33
SNX5-213ENST00000486039 MGPP08493 103 aa13□□□□□ -0.33
SNX5-213ENST00000486039 TOR2AQ5JU69 321 aa13□□□□□ -0.33
SNX5-213ENST00000486039 DNAJC30Q96LL9 226 aa13□□□□□ -0.33
SNX5-213ENST00000486039 TM2D2Q9BX73 214 aa13□□□□□ -0.33
SNX5-213ENST00000486039 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
SNX5-213ENST00000486039 URGCP-MRPS24S4R325 110 aa13□□□□□ -0.33
SNX5-213ENST00000486039 M0QY20 66 aa12.99□□□□□ -0.33
SNX5-213ENST00000486039 NTF3P20783 257 aa12.99□□□□□ -0.33
SNX5-213ENST00000486039 CTRLP40313 264 aa12.99□□□□□ -0.33
SNX5-213ENST00000486039 KRTAP10-1P60331 282 aa12.99□□□□□ -0.33
SNX5-213ENST00000486039 CHCHD7Q9BUK0 85 aa12.99□□□□□ -0.33
SNX5-213ENST00000486039 KLK12Q9UKR0 248 aa12.99□□□□□ -0.33
SNX5-213ENST00000486039 A0A087WX48 190 aa12.98□□□□□ -0.33
SNX5-213ENST00000486039 SUMO4Q6EEV6 95 aa12.98□□□□□ -0.33
SNX5-213ENST00000486039 NTM-AS1Q6ZSK4 140 aa12.98□□□□□ -0.33
SNX5-213ENST00000486039 Q8N814 137 aa12.98□□□□□ -0.33
SNX5-213ENST00000486039 TRGC1P0CF51 173 aa12.97□□□□□ -0.33
SNX5-213ENST00000486039 CEBPGP53567 150 aa12.97□□□□□ -0.33
SNX5-213ENST00000486039 WFDC2Q14508 124 aa12.97□□□□□ -0.33
SNX5-213ENST00000486039 WDR73Q6P4I2 378 aa12.97□□□□□ -0.33
SNX5-213ENST00000486039 FAM210AQ96ND0 272 aa12.97□□□□□ -0.33
SNX5-213ENST00000486039 CNFNQ9BYD5 112 aa12.97□□□□□ -0.33
SNX5-213ENST00000486039 EIF5A2Q9GZV4 153 aaKnown RBP12.97□□□□□ -0.33
SNX5-213ENST00000486039 TMEM262E9PQX1 116 aa12.96□□□□□ -0.33
SNX5-213ENST00000486039 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.33
SNX5-213ENST00000486039 GTSF1Q8WW33 167 aa12.96□□□□□ -0.33
SNX5-213ENST00000486039 DPH3P1Q9H4G8 78 aa12.96□□□□□ -0.33
SNX5-213ENST00000486039 H7C1H1 209 aa12.95□□□□□ -0.34
SNX5-213ENST00000486039 NDUFS6O75380 124 aaKnown RBP12.95□□□□□ -0.34
SNX5-213ENST00000486039 GCSHP23434 173 aa12.95□□□□□ -0.34
SNX5-213ENST00000486039 KCNIP4Q6PIL6 250 aa12.95□□□□□ -0.34
SNX5-213ENST00000486039 FAM231DQ6ZW35 169 aa12.95□□□□□ -0.34
SNX5-213ENST00000486039 NTN5Q8WTR8 489 aaPredicted RBP12.95□□□□□ -0.34
SNX5-213ENST00000486039 UBE2WQ96B02 151 aa12.95□□□□□ -0.34
SNX5-213ENST00000486039 IGLV5-52A0A0A0MRZ9 124 aa12.94□□□□□ -0.34
SNX5-213ENST00000486039 GATCO43716 136 aaKnown RBP12.94□□□□□ -0.34
SNX5-213ENST00000486039 ELOBQ15370 118 aa12.94□□□□□ -0.34
SNX5-213ENST00000486039 TWIST1Q15672 202 aa12.94□□□□□ -0.34
SNX5-213ENST00000486039 MPV17L2Q567V2 206 aa12.94□□□□□ -0.34
SNX5-213ENST00000486039 FAT1Q14517 4588 aa12.94□□□□□ -0.34
SNX5-213ENST00000486039 SRP19P09132 144 aaKnown RBP12.93□□□□□ -0.34
SNX5-213ENST00000486039 XGP55808 180 aa12.93□□□□□ -0.34
SNX5-213ENST00000486039 TMEM97Q5BJF2 176 aa12.93□□□□□ -0.34
SNX5-213ENST00000486039 RASL11AQ6T310 242 aa12.93□□□□□ -0.34
SNX5-213ENST00000486039 CHCHD5Q9BSY4 110 aa12.93□□□□□ -0.34
SNX5-213ENST00000486039 COX11Q9Y6N1 276 aa12.93□□□□□ -0.34
SNX5-213ENST00000486039 IGKV2D-24A0A075B6R9 120 aa12.92□□□□□ -0.34
SNX5-213ENST00000486039 LECT2O14960 151 aa12.92□□□□□ -0.34
SNX5-213ENST00000486039 BAALCQ8WXS3 180 aa12.92□□□□□ -0.34
SNX5-213ENST00000486039 RMI2Q96E14 147 aa12.92□□□□□ -0.34
SNX5-213ENST00000486039 SMIM7Q9BQ49 75 aa12.92□□□□□ -0.34
SNX5-213ENST00000486039 EPM2AB3EWF7 344 aa12.91□□□□□ -0.34
SNX5-213ENST00000486039 ATRAIDQ6UW56 229 aa12.91□□□□□ -0.34
SNX5-213ENST00000486039 ENHOQ6UWT2 76 aa12.91□□□□□ -0.34
SNX5-213ENST00000486039 LINC01551Q86U37 167 aa12.91□□□□□ -0.34
SNX5-213ENST00000486039 C15orf54Q8N8G6 183 aa12.91□□□□□ -0.34
SNX5-213ENST00000486039 Q8N976 141 aa12.91□□□□□ -0.34
SNX5-213ENST00000486039 TRBV25-1A0A075B6N4 114 aa12.9□□□□□ -0.34
SNX5-213ENST00000486039 ZNF727A8MUV8 499 aa12.9□□□□□ -0.34
SNX5-213ENST00000486039 Q0VG73 95 aa12.9□□□□□ -0.34
SNX5-213ENST00000486039 IQCJQ1A5X6 159 aa12.9□□□□□ -0.34
SNX5-213ENST00000486039 NIT2Q9NQR4 276 aa12.9□□□□□ -0.34
SNX5-213ENST00000486039 A8MWL6 223 aa12.89□□□□□ -0.35
SNX5-213ENST00000486039 ANGP03950 147 aaKnown RBP12.89□□□□□ -0.35
SNX5-213ENST00000486039 FOXA3P55318 350 aaPredicted RBP12.89□□□□□ -0.35
SNX5-213ENST00000486039 GAGE6Q13070 117 aa12.89□□□□□ -0.35
SNX5-213ENST00000486039 CT83Q5H943 113 aa12.89□□□□□ -0.35
SNX5-213ENST00000486039 TEX261Q6UWH6 196 aa12.89□□□□□ -0.35
SNX5-213ENST00000486039 PGLYRP4Q96LB8 373 aa12.89□□□□□ -0.35
SNX5-213ENST00000486039 PKIAP61925 76 aa12.88□□□□□ -0.35
SNX5-213ENST00000486039 GATD1Q8NB37 220 aa12.88□□□□□ -0.35
SNX5-213ENST00000486039 HERC1Q15751 4861 aa12.88□□□□□ -0.35
SNX5-213ENST00000486039 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
SNX5-213ENST00000486039 IGHV1-24A0A0C4DH33 117 aa12.87□□□□□ -0.35
SNX5-213ENST00000486039 RBX1P62877 108 aa12.87□□□□□ -0.35
SNX5-213ENST00000486039 DEFB104AQ8WTQ1 72 aa12.87□□□□□ -0.35
SNX5-213ENST00000486039 DNAH8Q96JB1 4490 aa12.86□□□□□ -0.35
SNX5-213ENST00000486039 C9JQL5 133 aa12.86□□□□□ -0.35
SNX5-213ENST00000486039 CRPP02741 224 aa12.86□□□□□ -0.35
SNX5-213ENST00000486039 C1orf43Q9BWL3 253 aa12.86□□□□□ -0.35
SNX5-213ENST00000486039 OSTCQ9NRP0 149 aa12.86□□□□□ -0.35
SNX5-213ENST00000486039 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.85□□□□□ -0.35
SNX5-213ENST00000486039 TSKUQ8WUA8 353 aa12.85□□□□□ -0.35
SNX5-213ENST00000486039 VPS13BQ7Z7G8 4022 aa12.85□□□□□ -0.35
SNX5-213ENST00000486039 SRSF3P84103 164 aaKnown RBP12.84□□□□□ -0.35
SNX5-213ENST00000486039 SMIM15Q7Z3B0 74 aa12.84□□□□□ -0.35
SNX5-213ENST00000486039 FRZBQ92765 325 aa12.84□□□□□ -0.35
SNX5-213ENST00000486039 RPL39LQ96EH5 51 aaKnown RBP12.84□□□□□ -0.35
SNX5-213ENST00000486039 PRR34Q9NV39 138 aa12.84□□□□□ -0.35
SNX5-213ENST00000486039 INAFM2P0DMQ5 153 aa12.83□□□□□ -0.36
SNX5-213ENST00000486039 HAMPP81172 84 aa12.83□□□□□ -0.36
SNX5-213ENST00000486039 CLPSL2Q6UWE3 100 aa12.83□□□□□ -0.36
SNX5-213ENST00000486039 LINC00269Q8N2A0 174 aa12.83□□□□□ -0.36
SNX5-213ENST00000486039 TMEM243Q9BU79 118 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms